RNA–Protein interactions for RNA: ENST00000437437.6

NR1I3-210, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-210ENST00000437437 LCA10Q71F78 164 aa6.23□□□□□ -1.41
NR1I3-210ENST00000437437 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
NR1I3-210ENST00000437437 COX7CP15954 63 aa6.22□□□□□ -1.41
NR1I3-210ENST00000437437 MT2AP02795 61 aa6.21□□□□□ -1.42
NR1I3-210ENST00000437437 C20orf197Q8N268 126 aa6.21□□□□□ -1.42
NR1I3-210ENST00000437437 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
NR1I3-210ENST00000437437 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
NR1I3-210ENST00000437437 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
NR1I3-210ENST00000437437 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
NR1I3-210ENST00000437437 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
NR1I3-210ENST00000437437 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
NR1I3-210ENST00000437437 MT1FP04733 61 aa6.16□□□□□ -1.42
NR1I3-210ENST00000437437 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
NR1I3-210ENST00000437437 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
NR1I3-210ENST00000437437 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
NR1I3-210ENST00000437437 NDUFC1O43677 76 aa6.11□□□□□ -1.43
NR1I3-210ENST00000437437 ACYP2P14621 99 aa6.09□□□□□ -1.43
NR1I3-210ENST00000437437 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
NR1I3-210ENST00000437437 H7BZZ5 65 aa6.07□□□□□ -1.44
NR1I3-210ENST00000437437 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
NR1I3-210ENST00000437437 H0YAA0 97 aa6.06□□□□□ -1.44
NR1I3-210ENST00000437437 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
NR1I3-210ENST00000437437 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
NR1I3-210ENST00000437437 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
NR1I3-210ENST00000437437 CCDC179H3BU77 68 aa6□□□□□ -1.45
NR1I3-210ENST00000437437 SPTSSBQ8NFR3 76 aa5.96□□□□□ -1.46
NR1I3-210ENST00000437437 CHKB-CPT1BH3BT56 60 aa5.93□□□□□ -1.46
NR1I3-210ENST00000437437 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
NR1I3-210ENST00000437437 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
NR1I3-210ENST00000437437 COA5Q86WW8 74 aa5.92□□□□□ -1.46
NR1I3-210ENST00000437437 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
NR1I3-210ENST00000437437 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
NR1I3-210ENST00000437437 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
NR1I3-210ENST00000437437 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.46
NR1I3-210ENST00000437437 USH2AO75445 5202 aa5.9□□□□□ -1.47
NR1I3-210ENST00000437437 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
NR1I3-210ENST00000437437 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
NR1I3-210ENST00000437437 TMEM258P61165 79 aa5.85□□□□□ -1.47
NR1I3-210ENST00000437437 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
NR1I3-210ENST00000437437 P0C880 135 aa5.83□□□□□ -1.48
NR1I3-210ENST00000437437 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
NR1I3-210ENST00000437437 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
NR1I3-210ENST00000437437 MT1BP07438 61 aa5.76□□□□□ -1.49
NR1I3-210ENST00000437437 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
NR1I3-210ENST00000437437 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
NR1I3-210ENST00000437437 R4GN34 69 aa5.74□□□□□ -1.49
NR1I3-210ENST00000437437 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
NR1I3-210ENST00000437437 Q5VV11 94 aa5.73□□□□□ -1.49
NR1I3-210ENST00000437437 M0QZ58 72 aa5.7□□□□□ -1.5
NR1I3-210ENST00000437437 PCP4P48539 62 aa5.68□□□□□ -1.5
NR1I3-210ENST00000437437 SEC61GP60059 68 aa5.66□□□□□ -1.5
NR1I3-210ENST00000437437 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
NR1I3-210ENST00000437437 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
NR1I3-210ENST00000437437 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
NR1I3-210ENST00000437437 A0A1B0GU69 56 aa5.59□□□□□ -1.51
NR1I3-210ENST00000437437 A6NN06 94 aa5.59□□□□□ -1.51
NR1I3-210ENST00000437437 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
NR1I3-210ENST00000437437 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
NR1I3-210ENST00000437437 A0A1B0GU33 70 aa5.56□□□□□ -1.52
NR1I3-210ENST00000437437 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
NR1I3-210ENST00000437437 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
NR1I3-210ENST00000437437 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
NR1I3-210ENST00000437437 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
NR1I3-210ENST00000437437 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
NR1I3-210ENST00000437437 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
NR1I3-210ENST00000437437 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
NR1I3-210ENST00000437437 MT1XP80297 61 aa5.48□□□□□ -1.53
NR1I3-210ENST00000437437 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
NR1I3-210ENST00000437437 Q1T7F1 81 aa5.46□□□□□ -1.54
NR1I3-210ENST00000437437 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
NR1I3-210ENST00000437437 V9GYY9 64 aa5.46□□□□□ -1.54
NR1I3-210ENST00000437437 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
NR1I3-210ENST00000437437 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
NR1I3-210ENST00000437437 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
NR1I3-210ENST00000437437 A0A0D9SG42 100 aa5.37□□□□□ -1.55
NR1I3-210ENST00000437437 UQCR11O14957 56 aa5.37□□□□□ -1.55
NR1I3-210ENST00000437437 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
NR1I3-210ENST00000437437 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
NR1I3-210ENST00000437437 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
NR1I3-210ENST00000437437 A8MU10 97 aa5.33□□□□□ -1.56
NR1I3-210ENST00000437437 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
NR1I3-210ENST00000437437 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
NR1I3-210ENST00000437437 PSPHP1O15172 72 aa5.31□□□□□ -1.56
NR1I3-210ENST00000437437 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
NR1I3-210ENST00000437437 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
NR1I3-210ENST00000437437 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
NR1I3-210ENST00000437437 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
NR1I3-210ENST00000437437 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
NR1I3-210ENST00000437437 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
NR1I3-210ENST00000437437 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.58
NR1I3-210ENST00000437437 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
NR1I3-210ENST00000437437 A6NED7 52 aa5.15□□□□□ -1.59
NR1I3-210ENST00000437437 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
NR1I3-210ENST00000437437 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
NR1I3-210ENST00000437437 KMT2DO14686 5537 aa5.1□□□□□ -1.59
NR1I3-210ENST00000437437 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
NR1I3-210ENST00000437437 K7ERS5 55 aa5.08□□□□□ -1.6
NR1I3-210ENST00000437437 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
NR1I3-210ENST00000437437 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
NR1I3-210ENST00000437437 TNP1P09430 55 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms