RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SERP1Q9Y6X1 66 aa4.78□□□□□ -1.64
NR1I3-209ENST00000428574 SPINK7P58062 85 aa4.77□□□□□ -1.65
NR1I3-209ENST00000428574 A8MUN3 132 aa4.76□□□□□ -1.65
NR1I3-209ENST00000428574 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
NR1I3-209ENST00000428574 HRES1P13985 223 aa4.75□□□□□ -1.65
NR1I3-209ENST00000428574 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
NR1I3-209ENST00000428574 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
NR1I3-209ENST00000428574 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
NR1I3-209ENST00000428574 ACYP2P14621 99 aa4.7□□□□□ -1.66
NR1I3-209ENST00000428574 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
NR1I3-209ENST00000428574 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
NR1I3-209ENST00000428574 COX6B2Q6YFQ2 88 aa4.69□□□□□ -1.66
NR1I3-209ENST00000428574 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
NR1I3-209ENST00000428574 LRP2P98164 4655 aa4.67□□□□□ -1.66
NR1I3-209ENST00000428574 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
NR1I3-209ENST00000428574 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
NR1I3-209ENST00000428574 LPAP08519 4548 aa4.64□□□□□ -1.67
NR1I3-209ENST00000428574 COA5Q86WW8 74 aa4.64□□□□□ -1.67
NR1I3-209ENST00000428574 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
NR1I3-209ENST00000428574 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
NR1I3-209ENST00000428574 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
NR1I3-209ENST00000428574 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
NR1I3-209ENST00000428574 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
NR1I3-209ENST00000428574 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
NR1I3-209ENST00000428574 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.68
NR1I3-209ENST00000428574 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
NR1I3-209ENST00000428574 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
NR1I3-209ENST00000428574 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
NR1I3-209ENST00000428574 Q1T7F1 81 aa4.52□□□□□ -1.69
NR1I3-209ENST00000428574 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
NR1I3-209ENST00000428574 S4R3F8 94 aa4.52□□□□□ -1.69
NR1I3-209ENST00000428574 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
NR1I3-209ENST00000428574 LCA10Q71F78 164 aa4.5□□□□□ -1.69
NR1I3-209ENST00000428574 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
NR1I3-209ENST00000428574 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
NR1I3-209ENST00000428574 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
NR1I3-209ENST00000428574 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
NR1I3-209ENST00000428574 H0YAA0 97 aa4.43□□□□□ -1.7
NR1I3-209ENST00000428574 MUC2Q02817 5179 aa4.41□□□□□ -1.7
NR1I3-209ENST00000428574 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
NR1I3-209ENST00000428574 A0A1B0GU69 56 aa4.4□□□□□ -1.71
NR1I3-209ENST00000428574 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
NR1I3-209ENST00000428574 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
NR1I3-209ENST00000428574 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
NR1I3-209ENST00000428574 A6NN06 94 aa4.37□□□□□ -1.71
NR1I3-209ENST00000428574 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
NR1I3-209ENST00000428574 Q5VV11 94 aa4.35□□□□□ -1.71
NR1I3-209ENST00000428574 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
NR1I3-209ENST00000428574 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NR1I3-209ENST00000428574 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
NR1I3-209ENST00000428574 MT1HP80294 61 aa4.32□□□□□ -1.72
NR1I3-209ENST00000428574 UQCR11O14957 56 aa4.3□□□□□ -1.72
NR1I3-209ENST00000428574 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
NR1I3-209ENST00000428574 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
NR1I3-209ENST00000428574 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
NR1I3-209ENST00000428574 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
NR1I3-209ENST00000428574 A0A1B0GU33 70 aa4.27□□□□□ -1.73
NR1I3-209ENST00000428574 M0R2T5 61 aa4.26□□□□□ -1.73
NR1I3-209ENST00000428574 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
NR1I3-209ENST00000428574 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
NR1I3-209ENST00000428574 A6NED7 52 aa4.25□□□□□ -1.73
NR1I3-209ENST00000428574 M0QZ58 72 aa4.25□□□□□ -1.73
NR1I3-209ENST00000428574 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
NR1I3-209ENST00000428574 P0C880 135 aa4.23□□□□□ -1.73
NR1I3-209ENST00000428574 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
NR1I3-209ENST00000428574 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
NR1I3-209ENST00000428574 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
NR1I3-209ENST00000428574 R4GN34 69 aa4.18□□□□□ -1.74
NR1I3-209ENST00000428574 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
NR1I3-209ENST00000428574 A8MU10 97 aa4.14□□□□□ -1.75
NR1I3-209ENST00000428574 MT2AP02795 61 aa4.14□□□□□ -1.75
NR1I3-209ENST00000428574 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
NR1I3-209ENST00000428574 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
NR1I3-209ENST00000428574 MT1FP04733 61 aa4.1□□□□□ -1.75
NR1I3-209ENST00000428574 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
NR1I3-209ENST00000428574 K7ERS5 55 aa4.09□□□□□ -1.75
NR1I3-209ENST00000428574 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
NR1I3-209ENST00000428574 A0A0D9SG42 100 aa4.02□□□□□ -1.77
NR1I3-209ENST00000428574 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
NR1I3-209ENST00000428574 ROMO1P60602 79 aa4.02□□□□□ -1.77
NR1I3-209ENST00000428574 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
NR1I3-209ENST00000428574 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
NR1I3-209ENST00000428574 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
NR1I3-209ENST00000428574 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
NR1I3-209ENST00000428574 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
NR1I3-209ENST00000428574 MT1BP07438 61 aa3.89□□□□□ -1.79
NR1I3-209ENST00000428574 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
NR1I3-209ENST00000428574 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
NR1I3-209ENST00000428574 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
NR1I3-209ENST00000428574 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
NR1I3-209ENST00000428574 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
NR1I3-209ENST00000428574 USH2AO75445 5202 aa3.77□□□□□ -1.81
NR1I3-209ENST00000428574 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
NR1I3-209ENST00000428574 MT1XP80297 61 aa3.76□□□□□ -1.81
NR1I3-209ENST00000428574 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
NR1I3-209ENST00000428574 TNP1P09430 55 aa3.74□□□□□ -1.81
NR1I3-209ENST00000428574 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
NR1I3-209ENST00000428574 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
NR1I3-209ENST00000428574 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
NR1I3-209ENST00000428574 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms