RNA–Protein interactions for RNA: ENST00000425254.2

LINC01534-201, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 2 BASIC

Gene LINC01534, Length 815 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-201ENST00000425254 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
LINC01534-201ENST00000425254 SNURFQ9Y675 71 aa7.58□□□□□ -1.2
LINC01534-201ENST00000425254 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
LINC01534-201ENST00000425254 COX7CP15954 63 aa7.54□□□□□ -1.2
LINC01534-201ENST00000425254 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
LINC01534-201ENST00000425254 S4R3F8 94 aa7.5□□□□□ -1.21
LINC01534-201ENST00000425254 LCA10Q71F78 164 aa7.49□□□□□ -1.21
LINC01534-201ENST00000425254 A8MUN3 132 aa7.48□□□□□ -1.21
LINC01534-201ENST00000425254 ANAPC13Q9BS18 74 aa7.48□□□□□ -1.21
LINC01534-201ENST00000425254 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
LINC01534-201ENST00000425254 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
LINC01534-201ENST00000425254 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
LINC01534-201ENST00000425254 MT2AP02795 61 aa7.43□□□□□ -1.22
LINC01534-201ENST00000425254 CYSTM1Q9H1C7 97 aa7.43□□□□□ -1.22
LINC01534-201ENST00000425254 H3BS24 57 aa7.42□□□□□ -1.22
LINC01534-201ENST00000425254 MT1FP04733 61 aa7.38□□□□□ -1.23
LINC01534-201ENST00000425254 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
LINC01534-201ENST00000425254 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
LINC01534-201ENST00000425254 CCDC179H3BU77 68 aa7.37□□□□□ -1.23
LINC01534-201ENST00000425254 H7BZZ5 65 aa7.35□□□□□ -1.23
LINC01534-201ENST00000425254 NDUFC1O43677 76 aa7.33□□□□□ -1.24
LINC01534-201ENST00000425254 ACYP2P14621 99 aa7.32□□□□□ -1.24
LINC01534-201ENST00000425254 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
LINC01534-201ENST00000425254 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
LINC01534-201ENST00000425254 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
LINC01534-201ENST00000425254 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
LINC01534-201ENST00000425254 H0YAA0 97 aa7.17□□□□□ -1.26
LINC01534-201ENST00000425254 COA5Q86WW8 74 aa7.17□□□□□ -1.26
LINC01534-201ENST00000425254 LCE1DQ5T752 114 aa7.15□□□□□ -1.26
LINC01534-201ENST00000425254 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
LINC01534-201ENST00000425254 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
LINC01534-201ENST00000425254 SPTSSBQ8NFR3 76 aa7.11□□□□□ -1.27
LINC01534-201ENST00000425254 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
LINC01534-201ENST00000425254 P0C880 135 aa7.06□□□□□ -1.28
LINC01534-201ENST00000425254 ATP5EP56381 51 aaPredicted RBP7.05□□□□□ -1.28
LINC01534-201ENST00000425254 TMEM258P61165 79 aa7.05□□□□□ -1.28
LINC01534-201ENST00000425254 USH2AO75445 5202 aa7.04□□□□□ -1.28
LINC01534-201ENST00000425254 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
LINC01534-201ENST00000425254 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
LINC01534-201ENST00000425254 PCP4P48539 62 aa7.01□□□□□ -1.29
LINC01534-201ENST00000425254 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
LINC01534-201ENST00000425254 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
LINC01534-201ENST00000425254 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
LINC01534-201ENST00000425254 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
LINC01534-201ENST00000425254 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
LINC01534-201ENST00000425254 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
LINC01534-201ENST00000425254 SSPOA2VEC9 5147 aa6.9□□□□□ -1.31
LINC01534-201ENST00000425254 MT1BP07438 61 aa6.89□□□□□ -1.31
LINC01534-201ENST00000425254 R4GN34 69 aa6.87□□□□□ -1.31
LINC01534-201ENST00000425254 M0QZ58 72 aa6.86□□□□□ -1.31
LINC01534-201ENST00000425254 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
LINC01534-201ENST00000425254 Q5VV11 94 aa6.84□□□□□ -1.31
LINC01534-201ENST00000425254 SEC61GP60059 68 aa6.8□□□□□ -1.32
LINC01534-201ENST00000425254 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
LINC01534-201ENST00000425254 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
LINC01534-201ENST00000425254 A0A1B0GU69 56 aa6.76□□□□□ -1.33
LINC01534-201ENST00000425254 LINC01554Q52M75 96 aa6.74□□□□□ -1.33
LINC01534-201ENST00000425254 KRTAP4-2Q9BYR5 136 aa6.74□□□□□ -1.33
LINC01534-201ENST00000425254 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
LINC01534-201ENST00000425254 A0A1B0GU33 70 aa6.71□□□□□ -1.34
LINC01534-201ENST00000425254 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
LINC01534-201ENST00000425254 KRTAP4-11Q9BYQ6 195 aa6.69□□□□□ -1.34
LINC01534-201ENST00000425254 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
LINC01534-201ENST00000425254 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
LINC01534-201ENST00000425254 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
LINC01534-201ENST00000425254 PRR15LQ9BU68 103 aa6.63□□□□□ -1.35
LINC01534-201ENST00000425254 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
LINC01534-201ENST00000425254 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
LINC01534-201ENST00000425254 A6NN06 94 aa6.6□□□□□ -1.35
LINC01534-201ENST00000425254 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
LINC01534-201ENST00000425254 A0A0D9SG42 100 aa6.58□□□□□ -1.36
LINC01534-201ENST00000425254 Q1T7F1 81 aa6.58□□□□□ -1.36
LINC01534-201ENST00000425254 MT1XP80297 61 aa6.56□□□□□ -1.36
LINC01534-201ENST00000425254 V9GYY9 64 aa6.55□□□□□ -1.36
LINC01534-201ENST00000425254 A8MU10 97 aa6.52□□□□□ -1.37
LINC01534-201ENST00000425254 PSPHP1O15172 72 aa6.52□□□□□ -1.37
LINC01534-201ENST00000425254 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
LINC01534-201ENST00000425254 UQCR11O14957 56 aa6.46□□□□□ -1.38
LINC01534-201ENST00000425254 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
LINC01534-201ENST00000425254 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
LINC01534-201ENST00000425254 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
LINC01534-201ENST00000425254 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
LINC01534-201ENST00000425254 MACF1Q9UPN3 7388 aaKnown RBP6.37□□□□□ -1.39
LINC01534-201ENST00000425254 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
LINC01534-201ENST00000425254 A6NED7 52 aa6.28□□□□□ -1.4
LINC01534-201ENST00000425254 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
LINC01534-201ENST00000425254 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
LINC01534-201ENST00000425254 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
LINC01534-201ENST00000425254 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
LINC01534-201ENST00000425254 KMT2DO14686 5537 aa6.15□□□□□ -1.42
LINC01534-201ENST00000425254 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
LINC01534-201ENST00000425254 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
LINC01534-201ENST00000425254 K7ERS5 55 aa6.09□□□□□ -1.43
LINC01534-201ENST00000425254 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
LINC01534-201ENST00000425254 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
LINC01534-201ENST00000425254 TNP1P09430 55 aa6□□□□□ -1.45
LINC01534-201ENST00000425254 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
LINC01534-201ENST00000425254 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
LINC01534-201ENST00000425254 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
LINC01534-201ENST00000425254 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms