RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
CASC3-203ENST00000418132 PRO0628Q9UI54 55 aa10.63□□□□□ -0.71
CASC3-203ENST00000418132 KRTAP4-1Q9BYQ7 146 aa10.62□□□□□ -0.71
CASC3-203ENST00000418132 KRTAP3-1Q9BYR8 98 aa10.61□□□□□ -0.71
CASC3-203ENST00000418132 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
CASC3-203ENST00000418132 A6NED7 52 aa10.46□□□□□ -0.74
CASC3-203ENST00000418132 A8MU10 97 aa10.43□□□□□ -0.74
CASC3-203ENST00000418132 A0A1B0GU69 56 aa10.41□□□□□ -0.74
CASC3-203ENST00000418132 UBR4Q5T4S7 5183 aa10.4□□□□□ -0.74
CASC3-203ENST00000418132 H1FX-AS1Q4G0G2 97 aa10.39□□□□□ -0.75
CASC3-203ENST00000418132 MUC2Q02817 5179 aa10.39□□□□□ -0.75
CASC3-203ENST00000418132 LCA10Q71F78 164 aa10.38□□□□□ -0.75
CASC3-203ENST00000418132 KRTAP19-2Q3LHN2 52 aa10.35□□□□□ -0.75
CASC3-203ENST00000418132 SPTSSBQ8NFR3 76 aa10.32□□□□□ -0.76
CASC3-203ENST00000418132 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
CASC3-203ENST00000418132 S4R3F8 94 aa10.28□□□□□ -0.76
CASC3-203ENST00000418132 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
CASC3-203ENST00000418132 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
CASC3-203ENST00000418132 SEC61GP60059 68 aa10.2□□□□□ -0.78
CASC3-203ENST00000418132 UQCR11O14957 56 aa10.15□□□□□ -0.78
CASC3-203ENST00000418132 LCE2CQ5TA81 110 aa10.13□□□□□ -0.79
CASC3-203ENST00000418132 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
CASC3-203ENST00000418132 PMAIP1Q13794 54 aa10.1□□□□□ -0.79
CASC3-203ENST00000418132 MIR22HGQ0VDD5 57 aa10.09□□□□□ -0.79
CASC3-203ENST00000418132 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
CASC3-203ENST00000418132 FLGP20930 4061 aaPredicted RBP10.06□□□□□ -0.8
CASC3-203ENST00000418132 FAT4Q6V0I7 4981 aa9.97□□□□□ -0.81
CASC3-203ENST00000418132 A6NN06 94 aa9.97□□□□□ -0.81
CASC3-203ENST00000418132 A0A1B0GU33 70 aa9.97□□□□□ -0.81
CASC3-203ENST00000418132 H0YAA0 97 aa9.91□□□□□ -0.82
CASC3-203ENST00000418132 MT1HP80294 61 aa9.91□□□□□ -0.82
CASC3-203ENST00000418132 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
CASC3-203ENST00000418132 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
CASC3-203ENST00000418132 ADM2Q7Z4H4 148 aa9.82□□□□□ -0.84
CASC3-203ENST00000418132 M0R2T5 61 aa9.79□□□□□ -0.84
CASC3-203ENST00000418132 KTN1-AS1Q86SY8 53 aa9.77□□□□□ -0.84
CASC3-203ENST00000418132 P0C880 135 aa9.77□□□□□ -0.85
CASC3-203ENST00000418132 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
CASC3-203ENST00000418132 KRTAP13-4Q3LI77 160 aa9.67□□□□□ -0.86
CASC3-203ENST00000418132 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
CASC3-203ENST00000418132 KRTAP9-8Q9BYQ0 159 aa9.55□□□□□ -0.88
CASC3-203ENST00000418132 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
CASC3-203ENST00000418132 A0A0D9SG42 100 aa9.54□□□□□ -0.88
CASC3-203ENST00000418132 M0QZ58 72 aa9.52□□□□□ -0.89
CASC3-203ENST00000418132 MT2AP02795 61 aa9.51□□□□□ -0.89
CASC3-203ENST00000418132 K7ERS5 55 aa9.5□□□□□ -0.89
CASC3-203ENST00000418132 R4GN34 69 aa9.48□□□□□ -0.89
CASC3-203ENST00000418132 PRAC1Q96KF2 57 aa9.46□□□□□ -0.89
CASC3-203ENST00000418132 CRIPTQ9P021 101 aa9.46□□□□□ -0.9
CASC3-203ENST00000418132 MT1FP04733 61 aa9.45□□□□□ -0.9
CASC3-203ENST00000418132 KRTAP10-10P60014 251 aa9.41□□□□□ -0.9
CASC3-203ENST00000418132 H3BS24 57 aa9.4□□□□□ -0.9
CASC3-203ENST00000418132 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
CASC3-203ENST00000418132 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
CASC3-203ENST00000418132 SPRR2GQ9BYE4 73 aa9.29□□□□□ -0.92
CASC3-203ENST00000418132 LINC01554Q52M75 96 aa9.28□□□□□ -0.92
CASC3-203ENST00000418132 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
CASC3-203ENST00000418132 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
CASC3-203ENST00000418132 ROMO1P60602 79 aa9.23□□□□□ -0.93
CASC3-203ENST00000418132 KRTAP9-3Q9BYQ3 159 aa9.21□□□□□ -0.93
CASC3-203ENST00000418132 A0A0A0MQY5 61 aa9.1□□□□□ -0.95
CASC3-203ENST00000418132 KRTAP25-1Q3LHN0 102 aa9.08□□□□□ -0.96
CASC3-203ENST00000418132 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
CASC3-203ENST00000418132 LCE2BO14633 110 aa8.96□□□□□ -0.98
CASC3-203ENST00000418132 MT1BP07438 61 aa8.94□□□□□ -0.98
CASC3-203ENST00000418132 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
CASC3-203ENST00000418132 CAMK2N1Q7Z7J9 78 aa8.86□□□□□ -0.99
CASC3-203ENST00000418132 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
CASC3-203ENST00000418132 USH2AO75445 5202 aa8.73□□□□□ -1.01
CASC3-203ENST00000418132 MT1XP80297 61 aa8.63□□□□□ -1.03
CASC3-203ENST00000418132 KRTAP10-5P60370 271 aa8.62□□□□□ -1.03
CASC3-203ENST00000418132 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
CASC3-203ENST00000418132 SSPOA2VEC9 5147 aa8.46□□□□□ -1.06
CASC3-203ENST00000418132 TNP1P09430 55 aa8.43□□□□□ -1.06
CASC3-203ENST00000418132 KRTAP19-6Q3LI70 58 aa8.43□□□□□ -1.06
CASC3-203ENST00000418132 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
CASC3-203ENST00000418132 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.06
CASC3-203ENST00000418132 PP632Q6XCG6 107 aa8.33□□□□□ -1.08
CASC3-203ENST00000418132 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
CASC3-203ENST00000418132 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
CASC3-203ENST00000418132 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
CASC3-203ENST00000418132 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
CASC3-203ENST00000418132 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
CASC3-203ENST00000418132 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
CASC3-203ENST00000418132 LCE3AQ5TA76 89 aa8.1□□□□□ -1.11
CASC3-203ENST00000418132 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
CASC3-203ENST00000418132 KRTAP4-8Q9BYQ9 185 aa7.97□□□□□ -1.13
CASC3-203ENST00000418132 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
CASC3-203ENST00000418132 KMT2DO14686 5537 aa7.91□□□□□ -1.14
CASC3-203ENST00000418132 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
CASC3-203ENST00000418132 KRTAP9-6A0A140TA67 174 aa7.77□□□□□ -1.17
CASC3-203ENST00000418132 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.17
CASC3-203ENST00000418132 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
CASC3-203ENST00000418132 MACF1Q9UPN3 7388 aaKnown RBP7.71□□□□□ -1.17
CASC3-203ENST00000418132 KRTAP19-7Q3SYF9 63 aa7.71□□□□□ -1.18
CASC3-203ENST00000418132 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
CASC3-203ENST00000418132 MT1EP04732 61 aa7.57□□□□□ -1.2
CASC3-203ENST00000418132 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
CASC3-203ENST00000418132 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
CASC3-203ENST00000418132 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms