RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
HLA-DMB-258ENST00000418107 DMAC1Q96GE9 116 aa6.78□□□□□ -1.32
HLA-DMB-258ENST00000418107 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-258ENST00000418107 A8MUN3 132 aa6.75□□□□□ -1.33
HLA-DMB-258ENST00000418107 COA5Q86WW8 74 aa6.75□□□□□ -1.33
HLA-DMB-258ENST00000418107 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
HLA-DMB-258ENST00000418107 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
HLA-DMB-258ENST00000418107 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
HLA-DMB-258ENST00000418107 M0R2T5 61 aa6.72□□□□□ -1.33
HLA-DMB-258ENST00000418107 RBM12B-AS1Q9P1G2 102 aa6.71□□□□□ -1.33
HLA-DMB-258ENST00000418107 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
HLA-DMB-258ENST00000418107 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.35
HLA-DMB-258ENST00000418107 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
HLA-DMB-258ENST00000418107 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
HLA-DMB-258ENST00000418107 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
HLA-DMB-258ENST00000418107 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
HLA-DMB-258ENST00000418107 SPTSSBQ8NFR3 76 aa6.6□□□□□ -1.35
HLA-DMB-258ENST00000418107 SSPOA2VEC9 5147 aa6.59□□□□□ -1.35
HLA-DMB-258ENST00000418107 USH2AO75445 5202 aa6.58□□□□□ -1.36
HLA-DMB-258ENST00000418107 S4R3F8 94 aa6.57□□□□□ -1.36
HLA-DMB-258ENST00000418107 V9GYY9 64 aa6.54□□□□□ -1.36
HLA-DMB-258ENST00000418107 LCA10Q71F78 164 aa6.5□□□□□ -1.37
HLA-DMB-258ENST00000418107 Q1T7F1 81 aa6.49□□□□□ -1.37
HLA-DMB-258ENST00000418107 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.37
HLA-DMB-258ENST00000418107 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
HLA-DMB-258ENST00000418107 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
HLA-DMB-258ENST00000418107 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
HLA-DMB-258ENST00000418107 PSPHP1O15172 72 aa6.44□□□□□ -1.38
HLA-DMB-258ENST00000418107 SEC61GP60059 68 aa6.44□□□□□ -1.38
HLA-DMB-258ENST00000418107 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
HLA-DMB-258ENST00000418107 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
HLA-DMB-258ENST00000418107 A0A1B0GU69 56 aa6.41□□□□□ -1.38
HLA-DMB-258ENST00000418107 MACF1Q9UPN3 7388 aaKnown RBP6.38□□□□□ -1.39
HLA-DMB-258ENST00000418107 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
HLA-DMB-258ENST00000418107 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
HLA-DMB-258ENST00000418107 MT2AP02795 61 aa6.32□□□□□ -1.4
HLA-DMB-258ENST00000418107 LCE2BO14633 110 aa6.31□□□□□ -1.4
HLA-DMB-258ENST00000418107 Q5VV11 94 aa6.31□□□□□ -1.4
HLA-DMB-258ENST00000418107 MT1FP04733 61 aa6.28□□□□□ -1.4
HLA-DMB-258ENST00000418107 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
HLA-DMB-258ENST00000418107 A6NED7 52 aa6.26□□□□□ -1.41
HLA-DMB-258ENST00000418107 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
HLA-DMB-258ENST00000418107 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
HLA-DMB-258ENST00000418107 A0A1B0GU33 70 aa6.21□□□□□ -1.41
HLA-DMB-258ENST00000418107 H0YAA0 97 aa6.2□□□□□ -1.42
HLA-DMB-258ENST00000418107 UQCR11O14957 56 aa6.2□□□□□ -1.42
HLA-DMB-258ENST00000418107 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
HLA-DMB-258ENST00000418107 P0C880 135 aa6.18□□□□□ -1.42
HLA-DMB-258ENST00000418107 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
HLA-DMB-258ENST00000418107 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
HLA-DMB-258ENST00000418107 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
HLA-DMB-258ENST00000418107 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
HLA-DMB-258ENST00000418107 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
HLA-DMB-258ENST00000418107 R4GN34 69 aa6.06□□□□□ -1.44
HLA-DMB-258ENST00000418107 M0QZ58 72 aa6.06□□□□□ -1.44
HLA-DMB-258ENST00000418107 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
HLA-DMB-258ENST00000418107 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
HLA-DMB-258ENST00000418107 NEBP20929 6669 aa6.02□□□□□ -1.45
HLA-DMB-258ENST00000418107 A0A0D9SG42 100 aa6.02□□□□□ -1.45
HLA-DMB-258ENST00000418107 A8MU10 97 aa6.02□□□□□ -1.45
HLA-DMB-258ENST00000418107 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
HLA-DMB-258ENST00000418107 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
HLA-DMB-258ENST00000418107 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
HLA-DMB-258ENST00000418107 K7ERS5 55 aa5.93□□□□□ -1.46
HLA-DMB-258ENST00000418107 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
HLA-DMB-258ENST00000418107 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
HLA-DMB-258ENST00000418107 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
HLA-DMB-258ENST00000418107 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
HLA-DMB-258ENST00000418107 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
HLA-DMB-258ENST00000418107 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
HLA-DMB-258ENST00000418107 A6NN06 94 aa5.77□□□□□ -1.49
HLA-DMB-258ENST00000418107 KRTAP20-1Q3LI63 56 aa5.77□□□□□ -1.49
HLA-DMB-258ENST00000418107 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
HLA-DMB-258ENST00000418107 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
HLA-DMB-258ENST00000418107 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
HLA-DMB-258ENST00000418107 KMT2DO14686 5537 aa5.67□□□□□ -1.5
HLA-DMB-258ENST00000418107 MT1BP07438 61 aa5.67□□□□□ -1.5
HLA-DMB-258ENST00000418107 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
HLA-DMB-258ENST00000418107 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
HLA-DMB-258ENST00000418107 ROMO1P60602 79 aa5.62□□□□□ -1.51
HLA-DMB-258ENST00000418107 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
HLA-DMB-258ENST00000418107 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
HLA-DMB-258ENST00000418107 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
HLA-DMB-258ENST00000418107 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
HLA-DMB-258ENST00000418107 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
HLA-DMB-258ENST00000418107 H3BS24 57 aa5.46□□□□□ -1.54
HLA-DMB-258ENST00000418107 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
HLA-DMB-258ENST00000418107 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
HLA-DMB-258ENST00000418107 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
HLA-DMB-258ENST00000418107 SPRR2EP22531 72 aa5.41□□□□□ -1.54
HLA-DMB-258ENST00000418107 SPRR2BP35325 72 aa5.41□□□□□ -1.54
HLA-DMB-258ENST00000418107 SPRR2AP35326 72 aa5.41□□□□□ -1.54
HLA-DMB-258ENST00000418107 TNP1P09430 55 aa5.4□□□□□ -1.55
HLA-DMB-258ENST00000418107 MT1XP80297 61 aa5.4□□□□□ -1.55
HLA-DMB-258ENST00000418107 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.55
HLA-DMB-258ENST00000418107 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
HLA-DMB-258ENST00000418107 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
HLA-DMB-258ENST00000418107 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
HLA-DMB-258ENST00000418107 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
HLA-DMB-258ENST00000418107 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms