RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
SCAMP4-204ENST00000414057 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
SCAMP4-204ENST00000414057 A8MUN3 132 aa8.57□□□□□ -1.04
SCAMP4-204ENST00000414057 C4orf26Q17RF5 130 aa8.56□□□□□ -1.04
SCAMP4-204ENST00000414057 ACYP2P14621 99 aa8.53□□□□□ -1.04
SCAMP4-204ENST00000414057 SERP1Q9Y6X1 66 aa8.53□□□□□ -1.04
SCAMP4-204ENST00000414057 RPS28P62857 69 aaKnown RBP8.5□□□□□ -1.05
SCAMP4-204ENST00000414057 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
SCAMP4-204ENST00000414057 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
SCAMP4-204ENST00000414057 COA5Q86WW8 74 aa8.44□□□□□ -1.06
SCAMP4-204ENST00000414057 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
SCAMP4-204ENST00000414057 KRTAP9-8Q9BYQ0 159 aa8.4□□□□□ -1.06
SCAMP4-204ENST00000414057 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
SCAMP4-204ENST00000414057 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
SCAMP4-204ENST00000414057 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
SCAMP4-204ENST00000414057 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
SCAMP4-204ENST00000414057 MT2AP02795 61 aa8.27□□□□□ -1.09
SCAMP4-204ENST00000414057 S4R3F8 94 aa8.26□□□□□ -1.09
SCAMP4-204ENST00000414057 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
SCAMP4-204ENST00000414057 LCA10Q71F78 164 aa8.2□□□□□ -1.1
SCAMP4-204ENST00000414057 MT1FP04733 61 aa8.19□□□□□ -1.1
SCAMP4-204ENST00000414057 V9GYY9 64 aa8.19□□□□□ -1.1
SCAMP4-204ENST00000414057 USH2AO75445 5202 aa8.18□□□□□ -1.1
SCAMP4-204ENST00000414057 Q1T7F1 81 aa8.16□□□□□ -1.1
SCAMP4-204ENST00000414057 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
SCAMP4-204ENST00000414057 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
SCAMP4-204ENST00000414057 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
SCAMP4-204ENST00000414057 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
SCAMP4-204ENST00000414057 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
SCAMP4-204ENST00000414057 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
SCAMP4-204ENST00000414057 LCE2BO14633 110 aa8.1□□□□□ -1.11
SCAMP4-204ENST00000414057 KRTAP9-7A8MTY7 169 aa8.04□□□□□ -1.12
SCAMP4-204ENST00000414057 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
SCAMP4-204ENST00000414057 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
SCAMP4-204ENST00000414057 SEC61GP60059 68 aa8.03□□□□□ -1.12
SCAMP4-204ENST00000414057 A0A1B0GU69 56 aa8□□□□□ -1.13
SCAMP4-204ENST00000414057 FCGBPQ9Y6R7 5405 aaPredicted RBP7.97□□□□□ -1.13
SCAMP4-204ENST00000414057 H0YAA0 97 aa7.96□□□□□ -1.13
SCAMP4-204ENST00000414057 PSPHP1O15172 72 aa7.94□□□□□ -1.14
SCAMP4-204ENST00000414057 Q5VV11 94 aa7.9□□□□□ -1.14
SCAMP4-204ENST00000414057 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
SCAMP4-204ENST00000414057 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
SCAMP4-204ENST00000414057 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
SCAMP4-204ENST00000414057 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
SCAMP4-204ENST00000414057 A0A1B0GU33 70 aa7.79□□□□□ -1.16
SCAMP4-204ENST00000414057 UQCR11O14957 56 aa7.78□□□□□ -1.16
SCAMP4-204ENST00000414057 P0C880 135 aa7.76□□□□□ -1.17
SCAMP4-204ENST00000414057 A6NED7 52 aa7.75□□□□□ -1.17
SCAMP4-204ENST00000414057 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
SCAMP4-204ENST00000414057 M0QZ58 72 aa7.68□□□□□ -1.18
SCAMP4-204ENST00000414057 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
SCAMP4-204ENST00000414057 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
SCAMP4-204ENST00000414057 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
SCAMP4-204ENST00000414057 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
SCAMP4-204ENST00000414057 R4GN34 69 aa7.62□□□□□ -1.19
SCAMP4-204ENST00000414057 BRK1Q8WUW1 75 aa7.58□□□□□ -1.2
SCAMP4-204ENST00000414057 KRTAP6-3Q3LI67 103 aa7.57□□□□□ -1.2
SCAMP4-204ENST00000414057 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
SCAMP4-204ENST00000414057 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
SCAMP4-204ENST00000414057 A6NN06 94 aa7.53□□□□□ -1.2
SCAMP4-204ENST00000414057 MT1BP07438 61 aa7.5□□□□□ -1.21
SCAMP4-204ENST00000414057 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
SCAMP4-204ENST00000414057 A8MU10 97 aa7.45□□□□□ -1.22
SCAMP4-204ENST00000414057 A0A0D9SG42 100 aa7.43□□□□□ -1.22
SCAMP4-204ENST00000414057 PRO0628Q9UI54 55 aa7.43□□□□□ -1.22
SCAMP4-204ENST00000414057 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
SCAMP4-204ENST00000414057 K7ERS5 55 aa7.39□□□□□ -1.23
SCAMP4-204ENST00000414057 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
SCAMP4-204ENST00000414057 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
SCAMP4-204ENST00000414057 SPINT4Q6UDR6 99 aa7.29□□□□□ -1.24
SCAMP4-204ENST00000414057 NEBP20929 6669 aa7.28□□□□□ -1.24
SCAMP4-204ENST00000414057 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
SCAMP4-204ENST00000414057 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
SCAMP4-204ENST00000414057 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
SCAMP4-204ENST00000414057 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
SCAMP4-204ENST00000414057 KRTAP5-9P26371 169 aa7.17□□□□□ -1.26
SCAMP4-204ENST00000414057 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
SCAMP4-204ENST00000414057 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
SCAMP4-204ENST00000414057 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
SCAMP4-204ENST00000414057 KMT2DO14686 5537 aa7.03□□□□□ -1.28
SCAMP4-204ENST00000414057 ROMO1P60602 79 aa7.02□□□□□ -1.29
SCAMP4-204ENST00000414057 MT1XP80297 61 aa7.01□□□□□ -1.29
SCAMP4-204ENST00000414057 MDN1Q9NU22 5596 aa7□□□□□ -1.29
SCAMP4-204ENST00000414057 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
SCAMP4-204ENST00000414057 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
SCAMP4-204ENST00000414057 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
SCAMP4-204ENST00000414057 KTN1-AS1Q86SY8 53 aa6.89□□□□□ -1.31
SCAMP4-204ENST00000414057 SPRR2EP22531 72 aa6.87□□□□□ -1.31
SCAMP4-204ENST00000414057 SPRR2BP35325 72 aa6.87□□□□□ -1.31
SCAMP4-204ENST00000414057 SPRR2AP35326 72 aa6.87□□□□□ -1.31
SCAMP4-204ENST00000414057 KRTAP2-3P0C7H8 128 aa6.86□□□□□ -1.31
SCAMP4-204ENST00000414057 KRTAP2-4Q9BYR9 128 aa6.86□□□□□ -1.31
SCAMP4-204ENST00000414057 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
SCAMP4-204ENST00000414057 TNP1P09430 55 aa6.79□□□□□ -1.32
SCAMP4-204ENST00000414057 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
SCAMP4-204ENST00000414057 LCE1AQ5T7P2 110 aa6.73□□□□□ -1.33
SCAMP4-204ENST00000414057 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
SCAMP4-204ENST00000414057 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
SCAMP4-204ENST00000414057 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
SCAMP4-204ENST00000414057 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms