RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
CHMP3-204ENST00000409727 DMAC1Q96GE9 116 aa6.4□□□□□ -1.39
CHMP3-204ENST00000409727 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
CHMP3-204ENST00000409727 SERP1Q9Y6X1 66 aa6.38□□□□□ -1.39
CHMP3-204ENST00000409727 ACYP2P14621 99 aa6.36□□□□□ -1.39
CHMP3-204ENST00000409727 COA5Q86WW8 74 aa6.36□□□□□ -1.39
CHMP3-204ENST00000409727 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
CHMP3-204ENST00000409727 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
CHMP3-204ENST00000409727 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
CHMP3-204ENST00000409727 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
CHMP3-204ENST00000409727 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
CHMP3-204ENST00000409727 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
CHMP3-204ENST00000409727 A8MUN3 132 aa6.32□□□□□ -1.4
CHMP3-204ENST00000409727 RBM12B-AS1Q9P1G2 102 aa6.31□□□□□ -1.4
CHMP3-204ENST00000409727 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
CHMP3-204ENST00000409727 MPLKIPQ8TAP9 179 aa6.29□□□□□ -1.4
CHMP3-204ENST00000409727 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
CHMP3-204ENST00000409727 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
CHMP3-204ENST00000409727 MUC2Q02817 5179 aa6.24□□□□□ -1.41
CHMP3-204ENST00000409727 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
CHMP3-204ENST00000409727 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.42
CHMP3-204ENST00000409727 SMIM26A0A096LP01 95 aa6.19□□□□□ -1.42
CHMP3-204ENST00000409727 LCA10Q71F78 164 aa6.19□□□□□ -1.42
CHMP3-204ENST00000409727 S4R3F8 94 aa6.19□□□□□ -1.42
CHMP3-204ENST00000409727 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
CHMP3-204ENST00000409727 LCE4AQ5TA78 99 aa6.17□□□□□ -1.42
CHMP3-204ENST00000409727 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.43
CHMP3-204ENST00000409727 SPTSSBQ8NFR3 76 aa6.13□□□□□ -1.43
CHMP3-204ENST00000409727 RNF213Q63HN8 5207 aa6.09□□□□□ -1.44
CHMP3-204ENST00000409727 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.44
CHMP3-204ENST00000409727 Q1T7F1 81 aa6.08□□□□□ -1.44
CHMP3-204ENST00000409727 PSPHP1O15172 72 aa6.07□□□□□ -1.44
CHMP3-204ENST00000409727 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
CHMP3-204ENST00000409727 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
CHMP3-204ENST00000409727 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
CHMP3-204ENST00000409727 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
CHMP3-204ENST00000409727 A0A1B0GU69 56 aa6.02□□□□□ -1.45
CHMP3-204ENST00000409727 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
CHMP3-204ENST00000409727 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
CHMP3-204ENST00000409727 Q5VV11 94 aa5.96□□□□□ -1.46
CHMP3-204ENST00000409727 M0R2T5 61 aa5.95□□□□□ -1.46
CHMP3-204ENST00000409727 MT1HP80294 61 aa5.94□□□□□ -1.46
CHMP3-204ENST00000409727 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
CHMP3-204ENST00000409727 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
CHMP3-204ENST00000409727 FLGP20930 4061 aaPredicted RBP5.93□□□□□ -1.46
CHMP3-204ENST00000409727 P0C880 135 aa5.89□□□□□ -1.47
CHMP3-204ENST00000409727 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
CHMP3-204ENST00000409727 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
CHMP3-204ENST00000409727 A6NED7 52 aa5.86□□□□□ -1.47
CHMP3-204ENST00000409727 A0A1B0GU33 70 aa5.84□□□□□ -1.47
CHMP3-204ENST00000409727 H0YAA0 97 aa5.84□□□□□ -1.47
CHMP3-204ENST00000409727 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
CHMP3-204ENST00000409727 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
CHMP3-204ENST00000409727 UQCR11O14957 56 aa5.8□□□□□ -1.48
CHMP3-204ENST00000409727 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
CHMP3-204ENST00000409727 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
CHMP3-204ENST00000409727 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
CHMP3-204ENST00000409727 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
CHMP3-204ENST00000409727 A8MU10 97 aa5.75□□□□□ -1.49
CHMP3-204ENST00000409727 M0QZ58 72 aa5.71□□□□□ -1.5
CHMP3-204ENST00000409727 R4GN34 69 aa5.71□□□□□ -1.5
CHMP3-204ENST00000409727 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
CHMP3-204ENST00000409727 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
CHMP3-204ENST00000409727 MT2AP02795 61 aa5.7□□□□□ -1.5
CHMP3-204ENST00000409727 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
CHMP3-204ENST00000409727 A0A0D9SG42 100 aa5.69□□□□□ -1.5
CHMP3-204ENST00000409727 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
CHMP3-204ENST00000409727 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
CHMP3-204ENST00000409727 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
CHMP3-204ENST00000409727 MT1FP04733 61 aa5.68□□□□□ -1.5
CHMP3-204ENST00000409727 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
CHMP3-204ENST00000409727 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
CHMP3-204ENST00000409727 CRIPTQ9P021 101 aa5.6□□□□□ -1.51
CHMP3-204ENST00000409727 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
CHMP3-204ENST00000409727 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
CHMP3-204ENST00000409727 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
CHMP3-204ENST00000409727 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
CHMP3-204ENST00000409727 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
CHMP3-204ENST00000409727 K7ERS5 55 aa5.49□□□□□ -1.53
CHMP3-204ENST00000409727 A6NN06 94 aa5.41□□□□□ -1.54
CHMP3-204ENST00000409727 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
CHMP3-204ENST00000409727 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
CHMP3-204ENST00000409727 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
CHMP3-204ENST00000409727 MT1BP07438 61 aa5.34□□□□□ -1.55
CHMP3-204ENST00000409727 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
CHMP3-204ENST00000409727 ROMO1P60602 79 aa5.25□□□□□ -1.57
CHMP3-204ENST00000409727 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
CHMP3-204ENST00000409727 USH2AO75445 5202 aa5.19□□□□□ -1.58
CHMP3-204ENST00000409727 MT1XP80297 61 aa5.17□□□□□ -1.58
CHMP3-204ENST00000409727 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
CHMP3-204ENST00000409727 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
CHMP3-204ENST00000409727 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
CHMP3-204ENST00000409727 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
CHMP3-204ENST00000409727 TNP1P09430 55 aa5.06□□□□□ -1.6
CHMP3-204ENST00000409727 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
CHMP3-204ENST00000409727 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
CHMP3-204ENST00000409727 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
CHMP3-204ENST00000409727 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
CHMP3-204ENST00000409727 KRTAP10-12P60413 245 aa4.9□□□□□ -1.62
CHMP3-204ENST00000409727 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms