RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
RPAIN-204ENST00000405578 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
RPAIN-204ENST00000405578 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
RPAIN-204ENST00000405578 Q5W150 140 aa5.41□□□□□ -1.54
RPAIN-204ENST00000405578 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.54
RPAIN-204ENST00000405578 H7BZZ5 65 aa5.4□□□□□ -1.54
RPAIN-204ENST00000405578 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.54
RPAIN-204ENST00000405578 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
RPAIN-204ENST00000405578 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
RPAIN-204ENST00000405578 USH2AO75445 5202 aa5.37□□□□□ -1.55
RPAIN-204ENST00000405578 TRAV22A0A0B4J277 110 aa5.37□□□□□ -1.55
RPAIN-204ENST00000405578 HRES1P13985 223 aa5.37□□□□□ -1.55
RPAIN-204ENST00000405578 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
RPAIN-204ENST00000405578 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
RPAIN-204ENST00000405578 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
RPAIN-204ENST00000405578 H0Y9P7 68 aa5.33□□□□□ -1.56
RPAIN-204ENST00000405578 MP68P56378 58 aa5.33□□□□□ -1.56
RPAIN-204ENST00000405578 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
RPAIN-204ENST00000405578 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
RPAIN-204ENST00000405578 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
RPAIN-204ENST00000405578 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
RPAIN-204ENST00000405578 C1orf64Q8NEQ6 169 aa5.28□□□□□ -1.56
RPAIN-204ENST00000405578 CYP4F30PQ9H0H9 118 aa5.28□□□□□ -1.56
RPAIN-204ENST00000405578 SNURFQ9Y675 71 aa5.28□□□□□ -1.56
RPAIN-204ENST00000405578 LINC00208Q96KT6 92 aa5.27□□□□□ -1.57
RPAIN-204ENST00000405578 H3BPC8 53 aa5.26□□□□□ -1.57
RPAIN-204ENST00000405578 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
RPAIN-204ENST00000405578 V9GYY9 64 aa5.24□□□□□ -1.57
RPAIN-204ENST00000405578 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
RPAIN-204ENST00000405578 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
RPAIN-204ENST00000405578 H3BS24 57 aa5.19□□□□□ -1.58
RPAIN-204ENST00000405578 Q1T7F1 81 aa5.18□□□□□ -1.58
RPAIN-204ENST00000405578 SEC61GP60059 68 aa5.16□□□□□ -1.58
RPAIN-204ENST00000405578 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
RPAIN-204ENST00000405578 A8MUN3 132 aa5.15□□□□□ -1.59
RPAIN-204ENST00000405578 MT2AP02795 61 aa5.13□□□□□ -1.59
RPAIN-204ENST00000405578 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
RPAIN-204ENST00000405578 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
RPAIN-204ENST00000405578 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
RPAIN-204ENST00000405578 S4R3F8 94 aa5.12□□□□□ -1.59
RPAIN-204ENST00000405578 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
RPAIN-204ENST00000405578 MT1FP04733 61 aa5.09□□□□□ -1.59
RPAIN-204ENST00000405578 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
RPAIN-204ENST00000405578 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
RPAIN-204ENST00000405578 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
RPAIN-204ENST00000405578 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
RPAIN-204ENST00000405578 SPANXA2-OT1Q8N9U9 137 aa5.07□□□□□ -1.6
RPAIN-204ENST00000405578 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
RPAIN-204ENST00000405578 LCA10Q71F78 164 aa5.06□□□□□ -1.6
RPAIN-204ENST00000405578 NEBP20929 6669 aa5.06□□□□□ -1.6
RPAIN-204ENST00000405578 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
RPAIN-204ENST00000405578 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
RPAIN-204ENST00000405578 ACYP2P14621 99 aa5.02□□□□□ -1.61
RPAIN-204ENST00000405578 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
RPAIN-204ENST00000405578 PSPHP1O15172 72 aa4.99□□□□□ -1.61
RPAIN-204ENST00000405578 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
RPAIN-204ENST00000405578 Q5VV11 94 aa4.98□□□□□ -1.61
RPAIN-204ENST00000405578 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
RPAIN-204ENST00000405578 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
RPAIN-204ENST00000405578 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
RPAIN-204ENST00000405578 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
RPAIN-204ENST00000405578 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
RPAIN-204ENST00000405578 H0YAA0 97 aa4.89□□□□□ -1.63
RPAIN-204ENST00000405578 A6NED7 52 aa4.88□□□□□ -1.63
RPAIN-204ENST00000405578 COA5Q86WW8 74 aa4.88□□□□□ -1.63
RPAIN-204ENST00000405578 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
RPAIN-204ENST00000405578 A6NN06 94 aa4.87□□□□□ -1.63
RPAIN-204ENST00000405578 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
RPAIN-204ENST00000405578 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
RPAIN-204ENST00000405578 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
RPAIN-204ENST00000405578 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
RPAIN-204ENST00000405578 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
RPAIN-204ENST00000405578 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
RPAIN-204ENST00000405578 A8MU10 97 aa4.78□□□□□ -1.64
RPAIN-204ENST00000405578 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
RPAIN-204ENST00000405578 P0C880 135 aa4.73□□□□□ -1.65
RPAIN-204ENST00000405578 R4GN34 69 aa4.73□□□□□ -1.65
RPAIN-204ENST00000405578 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
RPAIN-204ENST00000405578 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
RPAIN-204ENST00000405578 M0QZ58 72 aa4.69□□□□□ -1.66
RPAIN-204ENST00000405578 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
RPAIN-204ENST00000405578 KMT2DO14686 5537 aa4.65□□□□□ -1.67
RPAIN-204ENST00000405578 KRTAP19-8Q3LI54 63 aa4.65□□□□□ -1.67
RPAIN-204ENST00000405578 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
RPAIN-204ENST00000405578 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
RPAIN-204ENST00000405578 A0A1B0GU69 56 aa4.62□□□□□ -1.67
RPAIN-204ENST00000405578 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
RPAIN-204ENST00000405578 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
RPAIN-204ENST00000405578 UQCR11O14957 56 aa4.6□□□□□ -1.67
RPAIN-204ENST00000405578 MT1BP07438 61 aa4.59□□□□□ -1.67
RPAIN-204ENST00000405578 PLAC4Q8WY50 150 aa4.59□□□□□ -1.67
RPAIN-204ENST00000405578 A0A1B0GU33 70 aa4.58□□□□□ -1.68
RPAIN-204ENST00000405578 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
RPAIN-204ENST00000405578 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
RPAIN-204ENST00000405578 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
RPAIN-204ENST00000405578 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
RPAIN-204ENST00000405578 SPRR2EP22531 72 aa4.52□□□□□ -1.69
RPAIN-204ENST00000405578 SPRR2BP35325 72 aa4.52□□□□□ -1.69
RPAIN-204ENST00000405578 SPRR2AP35326 72 aa4.52□□□□□ -1.69
RPAIN-204ENST00000405578 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms