RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
PSEN1-203ENST00000394157 KRTAP9-7A8MTY7 169 aa9.66□□□□□ -0.86
PSEN1-203ENST00000394157 MT1HP80294 61 aa9.64□□□□□ -0.87
PSEN1-203ENST00000394157 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
PSEN1-203ENST00000394157 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-203ENST00000394157 KLKP1Q107X0 134 aa9.59□□□□□ -0.87
PSEN1-203ENST00000394157 KRTAP4-7Q9BYR0 210 aa9.56□□□□□ -0.88
PSEN1-203ENST00000394157 COX7CP15954 63 aa9.54□□□□□ -0.88
PSEN1-203ENST00000394157 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
PSEN1-203ENST00000394157 M0R2T5 61 aa9.53□□□□□ -0.88
PSEN1-203ENST00000394157 C20orf197Q8N268 126 aa9.52□□□□□ -0.89
PSEN1-203ENST00000394157 A8MUN3 132 aa9.51□□□□□ -0.89
PSEN1-203ENST00000394157 ANAPC13Q9BS18 74 aa9.51□□□□□ -0.89
PSEN1-203ENST00000394157 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
PSEN1-203ENST00000394157 KRTAP4-9Q9BYQ8 210 aa9.44□□□□□ -0.9
PSEN1-203ENST00000394157 S4R3F8 94 aa9.41□□□□□ -0.9
PSEN1-203ENST00000394157 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
PSEN1-203ENST00000394157 NDUFC1O43677 76 aa9.38□□□□□ -0.91
PSEN1-203ENST00000394157 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-203ENST00000394157 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
PSEN1-203ENST00000394157 KRTAP9-3Q9BYQ3 159 aa9.34□□□□□ -0.91
PSEN1-203ENST00000394157 LCA10Q71F78 164 aa9.32□□□□□ -0.92
PSEN1-203ENST00000394157 ACYP2P14621 99 aa9.29□□□□□ -0.92
PSEN1-203ENST00000394157 LCE5AQ5TCM9 118 aa9.29□□□□□ -0.92
PSEN1-203ENST00000394157 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
PSEN1-203ENST00000394157 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
PSEN1-203ENST00000394157 H7BZZ5 65 aa9.25□□□□□ -0.93
PSEN1-203ENST00000394157 FSIP2Q5CZC0 6907 aa9.22□□□□□ -0.93
PSEN1-203ENST00000394157 CYSTM1Q9H1C7 97 aa9.22□□□□□ -0.93
PSEN1-203ENST00000394157 KRTAP9-8Q9BYQ0 159 aa9.21□□□□□ -0.94
PSEN1-203ENST00000394157 KRTAP4-11Q9BYQ6 195 aa9.15□□□□□ -0.94
PSEN1-203ENST00000394157 MT2AP02795 61 aa9.13□□□□□ -0.95
PSEN1-203ENST00000394157 CRCT1Q9UGL9 99 aa9.13□□□□□ -0.95
PSEN1-203ENST00000394157 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
PSEN1-203ENST00000394157 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
PSEN1-203ENST00000394157 KRTAP4-2Q9BYR5 136 aa9.1□□□□□ -0.95
PSEN1-203ENST00000394157 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
PSEN1-203ENST00000394157 KRTAP10-10P60014 251 aa9.06□□□□□ -0.96
PSEN1-203ENST00000394157 MT1FP04733 61 aa9.05□□□□□ -0.96
PSEN1-203ENST00000394157 H0YAA0 97 aa9.04□□□□□ -0.96
PSEN1-203ENST00000394157 COA5Q86WW8 74 aa9.02□□□□□ -0.97
PSEN1-203ENST00000394157 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
PSEN1-203ENST00000394157 TMEM258P61165 79 aa9.01□□□□□ -0.97
PSEN1-203ENST00000394157 PCP4P48539 62 aa8.92□□□□□ -0.98
PSEN1-203ENST00000394157 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
PSEN1-203ENST00000394157 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
PSEN1-203ENST00000394157 P0C880 135 aa8.75□□□□□ -1.01
PSEN1-203ENST00000394157 SPRR2GQ9BYE4 73 aa8.74□□□□□ -1.01
PSEN1-203ENST00000394157 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
PSEN1-203ENST00000394157 SEC61GP60059 68 aa8.7□□□□□ -1.02
PSEN1-203ENST00000394157 R4GN34 69 aa8.66□□□□□ -1.02
PSEN1-203ENST00000394157 M0QZ58 72 aa8.59□□□□□ -1.03
PSEN1-203ENST00000394157 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
PSEN1-203ENST00000394157 A0A1B0GU69 56 aa8.57□□□□□ -1.04
PSEN1-203ENST00000394157 USH2AO75445 5202 aa8.57□□□□□ -1.04
PSEN1-203ENST00000394157 Q5VV11 94 aa8.54□□□□□ -1.04
PSEN1-203ENST00000394157 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
PSEN1-203ENST00000394157 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
PSEN1-203ENST00000394157 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
PSEN1-203ENST00000394157 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
PSEN1-203ENST00000394157 A0A1B0GU33 70 aa8.47□□□□□ -1.05
PSEN1-203ENST00000394157 MT1BP07438 61 aa8.46□□□□□ -1.06
PSEN1-203ENST00000394157 V9GYY9 64 aa8.45□□□□□ -1.06
PSEN1-203ENST00000394157 SMIM26A0A096LP01 95 aa8.42□□□□□ -1.06
PSEN1-203ENST00000394157 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
PSEN1-203ENST00000394157 Q1T7F1 81 aa8.39□□□□□ -1.07
PSEN1-203ENST00000394157 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
PSEN1-203ENST00000394157 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
PSEN1-203ENST00000394157 KRTAP19-6Q3LI70 58 aa8.37□□□□□ -1.07
PSEN1-203ENST00000394157 A6NN06 94 aa8.36□□□□□ -1.07
PSEN1-203ENST00000394157 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
PSEN1-203ENST00000394157 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
PSEN1-203ENST00000394157 UQCR11O14957 56 aa8.24□□□□□ -1.09
PSEN1-203ENST00000394157 A0A0D9SG42 100 aa8.2□□□□□ -1.1
PSEN1-203ENST00000394157 PSPHP1O15172 72 aa8.2□□□□□ -1.1
PSEN1-203ENST00000394157 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
PSEN1-203ENST00000394157 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
PSEN1-203ENST00000394157 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-203ENST00000394157 A8MU10 97 aa8.09□□□□□ -1.11
PSEN1-203ENST00000394157 SYNE2Q8WXH0 6885 aaKnown RBP8.08□□□□□ -1.12
PSEN1-203ENST00000394157 MT1XP80297 61 aa8.08□□□□□ -1.12
PSEN1-203ENST00000394157 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
PSEN1-203ENST00000394157 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
PSEN1-203ENST00000394157 SPINT4Q6UDR6 99 aa8.07□□□□□ -1.12
PSEN1-203ENST00000394157 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
PSEN1-203ENST00000394157 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
PSEN1-203ENST00000394157 A6NED7 52 aa8□□□□□ -1.13
PSEN1-203ENST00000394157 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
PSEN1-203ENST00000394157 K7ERS5 55 aa7.87□□□□□ -1.15
PSEN1-203ENST00000394157 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
PSEN1-203ENST00000394157 KRTAP5-3Q6L8H2 238 aa7.82□□□□□ -1.16
PSEN1-203ENST00000394157 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
PSEN1-203ENST00000394157 KRTAP10-12P60413 245 aa7.71□□□□□ -1.18
PSEN1-203ENST00000394157 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-203ENST00000394157 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
PSEN1-203ENST00000394157 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
PSEN1-203ENST00000394157 NEBP20929 6669 aa7.64□□□□□ -1.19
PSEN1-203ENST00000394157 TNP1P09430 55 aa7.58□□□□□ -1.2
PSEN1-203ENST00000394157 KRTAP20-1Q3LI63 56 aa7.54□□□□□ -1.2
PSEN1-203ENST00000394157 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms