RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ATP11AUNQ6ZP68 121 aa7.19□□□□□ -1.26
PTN-202ENST00000393083 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
PTN-202ENST00000393083 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
PTN-202ENST00000393083 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
PTN-202ENST00000393083 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.27
PTN-202ENST00000393083 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
PTN-202ENST00000393083 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
PTN-202ENST00000393083 KRTAP4-2Q9BYR5 136 aa7.12□□□□□ -1.27
PTN-202ENST00000393083 HRES1P13985 223 aa7.11□□□□□ -1.27
PTN-202ENST00000393083 SPINK7P58062 85 aa7.1□□□□□ -1.27
PTN-202ENST00000393083 KRTAP4-9Q9BYQ8 210 aa7.1□□□□□ -1.27
PTN-202ENST00000393083 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
PTN-202ENST00000393083 SERP1Q9Y6X1 66 aa7.01□□□□□ -1.29
PTN-202ENST00000393083 C4orf26Q17RF5 130 aa7□□□□□ -1.29
PTN-202ENST00000393083 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
PTN-202ENST00000393083 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
PTN-202ENST00000393083 ACYP2P14621 99 aa6.95□□□□□ -1.3
PTN-202ENST00000393083 RPS28P62857 69 aaKnown RBP6.95□□□□□ -1.3
PTN-202ENST00000393083 COA5Q86WW8 74 aa6.95□□□□□ -1.3
PTN-202ENST00000393083 A8MUN3 132 aa6.92□□□□□ -1.3
PTN-202ENST00000393083 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
PTN-202ENST00000393083 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
PTN-202ENST00000393083 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
PTN-202ENST00000393083 MPLKIPQ8TAP9 179 aa6.85□□□□□ -1.31
PTN-202ENST00000393083 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
PTN-202ENST00000393083 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
PTN-202ENST00000393083 MT1HP80294 61 aa6.82□□□□□ -1.32
PTN-202ENST00000393083 KRTAP4-11Q9BYQ6 195 aa6.8□□□□□ -1.32
PTN-202ENST00000393083 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
PTN-202ENST00000393083 H1FX-AS1Q4G0G2 97 aa6.76□□□□□ -1.33
PTN-202ENST00000393083 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
PTN-202ENST00000393083 S4R3F8 94 aa6.73□□□□□ -1.33
PTN-202ENST00000393083 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.34
PTN-202ENST00000393083 LCA10Q71F78 164 aa6.69□□□□□ -1.34
PTN-202ENST00000393083 Q1T7F1 81 aa6.69□□□□□ -1.34
PTN-202ENST00000393083 V9GYY9 64 aa6.68□□□□□ -1.34
PTN-202ENST00000393083 M0R2T5 61 aa6.65□□□□□ -1.34
PTN-202ENST00000393083 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.35
PTN-202ENST00000393083 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
PTN-202ENST00000393083 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
PTN-202ENST00000393083 PSPHP1O15172 72 aa6.59□□□□□ -1.35
PTN-202ENST00000393083 A0A1B0GU69 56 aa6.57□□□□□ -1.36
PTN-202ENST00000393083 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
PTN-202ENST00000393083 SEC61GP60059 68 aa6.52□□□□□ -1.36
PTN-202ENST00000393083 Q5VV11 94 aa6.52□□□□□ -1.36
PTN-202ENST00000393083 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
PTN-202ENST00000393083 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
PTN-202ENST00000393083 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
PTN-202ENST00000393083 MT2AP02795 61 aa6.41□□□□□ -1.38
PTN-202ENST00000393083 A6NED7 52 aa6.4□□□□□ -1.39
PTN-202ENST00000393083 H0YAA0 97 aa6.4□□□□□ -1.39
PTN-202ENST00000393083 MT1FP04733 61 aa6.37□□□□□ -1.39
PTN-202ENST00000393083 P0C880 135 aa6.37□□□□□ -1.39
PTN-202ENST00000393083 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
PTN-202ENST00000393083 A0A1B0GU33 70 aa6.35□□□□□ -1.39
PTN-202ENST00000393083 UQCR11O14957 56 aa6.35□□□□□ -1.39
PTN-202ENST00000393083 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
PTN-202ENST00000393083 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
PTN-202ENST00000393083 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
PTN-202ENST00000393083 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
PTN-202ENST00000393083 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
PTN-202ENST00000393083 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
PTN-202ENST00000393083 A8MU10 97 aa6.23□□□□□ -1.41
PTN-202ENST00000393083 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
PTN-202ENST00000393083 FSIP2Q5CZC0 6907 aa6.23□□□□□ -1.41
PTN-202ENST00000393083 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
PTN-202ENST00000393083 M0QZ58 72 aa6.19□□□□□ -1.42
PTN-202ENST00000393083 R4GN34 69 aa6.18□□□□□ -1.42
PTN-202ENST00000393083 USH2AO75445 5202 aa6.16□□□□□ -1.42
PTN-202ENST00000393083 A0A0D9SG42 100 aa6.14□□□□□ -1.43
PTN-202ENST00000393083 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
PTN-202ENST00000393083 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
PTN-202ENST00000393083 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
PTN-202ENST00000393083 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
PTN-202ENST00000393083 H3BS24 57 aa6.01□□□□□ -1.45
PTN-202ENST00000393083 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
PTN-202ENST00000393083 K7ERS5 55 aa6.01□□□□□ -1.45
PTN-202ENST00000393083 KRTAP12-1P59990 96 aa6□□□□□ -1.45
PTN-202ENST00000393083 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
PTN-202ENST00000393083 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
PTN-202ENST00000393083 A6NN06 94 aa5.94□□□□□ -1.46
PTN-202ENST00000393083 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
PTN-202ENST00000393083 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
PTN-202ENST00000393083 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
PTN-202ENST00000393083 MT1BP07438 61 aa5.92□□□□□ -1.46
PTN-202ENST00000393083 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
PTN-202ENST00000393083 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
PTN-202ENST00000393083 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
PTN-202ENST00000393083 ROMO1P60602 79 aa5.76□□□□□ -1.49
PTN-202ENST00000393083 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
PTN-202ENST00000393083 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
PTN-202ENST00000393083 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
PTN-202ENST00000393083 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
PTN-202ENST00000393083 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
PTN-202ENST00000393083 MT1XP80297 61 aa5.61□□□□□ -1.51
PTN-202ENST00000393083 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
PTN-202ENST00000393083 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
PTN-202ENST00000393083 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
PTN-202ENST00000393083 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
PTN-202ENST00000393083 TNP1P09430 55 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms