RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
SUMO1-203ENST00000392246 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
SUMO1-203ENST00000392246 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
SUMO1-203ENST00000392246 S4R3F8 94 aa7.2□□□□□ -1.26
SUMO1-203ENST00000392246 A8MUN3 132 aa7.17□□□□□ -1.26
SUMO1-203ENST00000392246 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
SUMO1-203ENST00000392246 KRTAP4-7Q9BYR0 210 aa7.17□□□□□ -1.26
SUMO1-203ENST00000392246 LCA10Q71F78 164 aa7.14□□□□□ -1.27
SUMO1-203ENST00000392246 SNURFQ9Y675 71 aa7.13□□□□□ -1.27
SUMO1-203ENST00000392246 C20orf197Q8N268 126 aa7.12□□□□□ -1.27
SUMO1-203ENST00000392246 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
SUMO1-203ENST00000392246 MT2AP02795 61 aa7.1□□□□□ -1.27
SUMO1-203ENST00000392246 COX7CP15954 63 aa7.09□□□□□ -1.27
SUMO1-203ENST00000392246 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
SUMO1-203ENST00000392246 MT1FP04733 61 aa7.05□□□□□ -1.28
SUMO1-203ENST00000392246 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
SUMO1-203ENST00000392246 NDUFC1O43677 76 aa7.04□□□□□ -1.28
SUMO1-203ENST00000392246 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
SUMO1-203ENST00000392246 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
SUMO1-203ENST00000392246 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
SUMO1-203ENST00000392246 ACYP2P14621 99 aa7□□□□□ -1.29
SUMO1-203ENST00000392246 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
SUMO1-203ENST00000392246 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
SUMO1-203ENST00000392246 H7BZZ5 65 aa6.9□□□□□ -1.31
SUMO1-203ENST00000392246 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.31
SUMO1-203ENST00000392246 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
SUMO1-203ENST00000392246 H0YAA0 97 aa6.87□□□□□ -1.31
SUMO1-203ENST00000392246 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
SUMO1-203ENST00000392246 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
SUMO1-203ENST00000392246 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
SUMO1-203ENST00000392246 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
SUMO1-203ENST00000392246 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
SUMO1-203ENST00000392246 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.32
SUMO1-203ENST00000392246 COA5Q86WW8 74 aa6.77□□□□□ -1.33
SUMO1-203ENST00000392246 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
SUMO1-203ENST00000392246 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
SUMO1-203ENST00000392246 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
SUMO1-203ENST00000392246 USH2AO75445 5202 aa6.72□□□□□ -1.33
SUMO1-203ENST00000392246 P0C880 135 aa6.69□□□□□ -1.34
SUMO1-203ENST00000392246 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
SUMO1-203ENST00000392246 TMEM258P61165 79 aa6.64□□□□□ -1.35
SUMO1-203ENST00000392246 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
SUMO1-203ENST00000392246 R4GN34 69 aa6.61□□□□□ -1.35
SUMO1-203ENST00000392246 Q5VV11 94 aa6.6□□□□□ -1.35
SUMO1-203ENST00000392246 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
SUMO1-203ENST00000392246 M0QZ58 72 aa6.57□□□□□ -1.36
SUMO1-203ENST00000392246 MT1BP07438 61 aa6.56□□□□□ -1.36
SUMO1-203ENST00000392246 SEC61GP60059 68 aa6.55□□□□□ -1.36
SUMO1-203ENST00000392246 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
SUMO1-203ENST00000392246 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
SUMO1-203ENST00000392246 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
SUMO1-203ENST00000392246 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
SUMO1-203ENST00000392246 PCP4P48539 62 aa6.48□□□□□ -1.37
SUMO1-203ENST00000392246 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
SUMO1-203ENST00000392246 A0A1B0GU69 56 aa6.43□□□□□ -1.38
SUMO1-203ENST00000392246 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SUMO1-203ENST00000392246 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
SUMO1-203ENST00000392246 A0A1B0GU33 70 aa6.39□□□□□ -1.39
SUMO1-203ENST00000392246 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
SUMO1-203ENST00000392246 A6NN06 94 aa6.37□□□□□ -1.39
SUMO1-203ENST00000392246 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
SUMO1-203ENST00000392246 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
SUMO1-203ENST00000392246 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
SUMO1-203ENST00000392246 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
SUMO1-203ENST00000392246 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
SUMO1-203ENST00000392246 A0A0D9SG42 100 aa6.25□□□□□ -1.41
SUMO1-203ENST00000392246 MT1XP80297 61 aa6.25□□□□□ -1.41
SUMO1-203ENST00000392246 V9GYY9 64 aa6.24□□□□□ -1.41
SUMO1-203ENST00000392246 SMIM26A0A096LP01 95 aa6.21□□□□□ -1.42
SUMO1-203ENST00000392246 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
SUMO1-203ENST00000392246 Q1T7F1 81 aa6.2□□□□□ -1.42
SUMO1-203ENST00000392246 UQCR11O14957 56 aa6.15□□□□□ -1.42
SUMO1-203ENST00000392246 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.43
SUMO1-203ENST00000392246 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
SUMO1-203ENST00000392246 A8MU10 97 aa6.14□□□□□ -1.43
SUMO1-203ENST00000392246 CAMK2N1Q7Z7J9 78 aa6.14□□□□□ -1.43
SUMO1-203ENST00000392246 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
SUMO1-203ENST00000392246 PSPHP1O15172 72 aa6.12□□□□□ -1.43
SUMO1-203ENST00000392246 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
SUMO1-203ENST00000392246 KRTAP12-2P59991 146 aa6.09□□□□□ -1.44
SUMO1-203ENST00000392246 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
SUMO1-203ENST00000392246 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
SUMO1-203ENST00000392246 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
SUMO1-203ENST00000392246 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
SUMO1-203ENST00000392246 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
SUMO1-203ENST00000392246 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
SUMO1-203ENST00000392246 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
SUMO1-203ENST00000392246 A6NED7 52 aa5.94□□□□□ -1.46
SUMO1-203ENST00000392246 KMT2DO14686 5537 aa5.9□□□□□ -1.47
SUMO1-203ENST00000392246 K7ERS5 55 aa5.87□□□□□ -1.47
SUMO1-203ENST00000392246 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
SUMO1-203ENST00000392246 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
SUMO1-203ENST00000392246 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
SUMO1-203ENST00000392246 TNP1P09430 55 aa5.76□□□□□ -1.49
SUMO1-203ENST00000392246 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
SUMO1-203ENST00000392246 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
SUMO1-203ENST00000392246 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
SUMO1-203ENST00000392246 NEBP20929 6669 aa5.61□□□□□ -1.51
SUMO1-203ENST00000392246 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SUMO1-203ENST00000392246 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms