RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
ERCC8-202ENST00000381118 COX6B2Q6YFQ2 88 aa4.08□□□□□ -1.76
ERCC8-202ENST00000381118 A8MUN3 132 aa4.06□□□□□ -1.76
ERCC8-202ENST00000381118 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
ERCC8-202ENST00000381118 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
ERCC8-202ENST00000381118 RBM12B-AS1Q9P1G2 102 aa4.05□□□□□ -1.76
ERCC8-202ENST00000381118 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
ERCC8-202ENST00000381118 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
ERCC8-202ENST00000381118 SMIM26A0A096LP01 95 aa3.99□□□□□ -1.77
ERCC8-202ENST00000381118 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
ERCC8-202ENST00000381118 LCA10Q71F78 164 aa3.98□□□□□ -1.77
ERCC8-202ENST00000381118 S4R3F8 94 aa3.98□□□□□ -1.77
ERCC8-202ENST00000381118 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
ERCC8-202ENST00000381118 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
ERCC8-202ENST00000381118 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
ERCC8-202ENST00000381118 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
ERCC8-202ENST00000381118 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
ERCC8-202ENST00000381118 PSPHP1O15172 72 aa3.92□□□□□ -1.78
ERCC8-202ENST00000381118 Q1T7F1 81 aa3.92□□□□□ -1.78
ERCC8-202ENST00000381118 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
ERCC8-202ENST00000381118 PRR15LQ9BU68 103 aa3.9□□□□□ -1.78
ERCC8-202ENST00000381118 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
ERCC8-202ENST00000381118 V9GYY9 64 aa3.9□□□□□ -1.79
ERCC8-202ENST00000381118 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
ERCC8-202ENST00000381118 A0A1B0GU69 56 aa3.88□□□□□ -1.79
ERCC8-202ENST00000381118 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
ERCC8-202ENST00000381118 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
ERCC8-202ENST00000381118 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
ERCC8-202ENST00000381118 SEC61GP60059 68 aa3.85□□□□□ -1.79
ERCC8-202ENST00000381118 Q5VV11 94 aa3.85□□□□□ -1.79
ERCC8-202ENST00000381118 M0R2T5 61 aa3.82□□□□□ -1.8
ERCC8-202ENST00000381118 MT1HP80294 61 aa3.82□□□□□ -1.8
ERCC8-202ENST00000381118 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
ERCC8-202ENST00000381118 P0C880 135 aa3.79□□□□□ -1.8
ERCC8-202ENST00000381118 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
ERCC8-202ENST00000381118 A6NED7 52 aa3.78□□□□□ -1.8
ERCC8-202ENST00000381118 A0A1B0GU33 70 aa3.76□□□□□ -1.81
ERCC8-202ENST00000381118 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
ERCC8-202ENST00000381118 H0YAA0 97 aa3.75□□□□□ -1.81
ERCC8-202ENST00000381118 UQCR11O14957 56 aa3.74□□□□□ -1.81
ERCC8-202ENST00000381118 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
ERCC8-202ENST00000381118 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
ERCC8-202ENST00000381118 A8MU10 97 aa3.72□□□□□ -1.81
ERCC8-202ENST00000381118 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
ERCC8-202ENST00000381118 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
ERCC8-202ENST00000381118 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
ERCC8-202ENST00000381118 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
ERCC8-202ENST00000381118 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
ERCC8-202ENST00000381118 LCE3BQ5TA77 95 aa3.69□□□□□ -1.82
ERCC8-202ENST00000381118 R4GN34 69 aa3.68□□□□□ -1.82
ERCC8-202ENST00000381118 M0QZ58 72 aa3.68□□□□□ -1.82
ERCC8-202ENST00000381118 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
ERCC8-202ENST00000381118 A0A0D9SG42 100 aa3.67□□□□□ -1.82
ERCC8-202ENST00000381118 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
ERCC8-202ENST00000381118 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
ERCC8-202ENST00000381118 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
ERCC8-202ENST00000381118 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
ERCC8-202ENST00000381118 MT2AP02795 61 aa3.65□□□□□ -1.83
ERCC8-202ENST00000381118 LINC01554Q52M75 96 aa3.65□□□□□ -1.83
ERCC8-202ENST00000381118 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
ERCC8-202ENST00000381118 MT1FP04733 61 aa3.64□□□□□ -1.83
ERCC8-202ENST00000381118 CRIPTQ9P021 101 aa3.59□□□□□ -1.83
ERCC8-202ENST00000381118 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
ERCC8-202ENST00000381118 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
ERCC8-202ENST00000381118 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
ERCC8-202ENST00000381118 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
ERCC8-202ENST00000381118 KRTAP12-1P59990 96 aa3.54□□□□□ -1.84
ERCC8-202ENST00000381118 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
ERCC8-202ENST00000381118 K7ERS5 55 aa3.53□□□□□ -1.84
ERCC8-202ENST00000381118 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
ERCC8-202ENST00000381118 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
ERCC8-202ENST00000381118 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
ERCC8-202ENST00000381118 A6NN06 94 aa3.47□□□□□ -1.85
ERCC8-202ENST00000381118 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
ERCC8-202ENST00000381118 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
ERCC8-202ENST00000381118 USH2AO75445 5202 aa3.45□□□□□ -1.86
ERCC8-202ENST00000381118 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
ERCC8-202ENST00000381118 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
ERCC8-202ENST00000381118 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
ERCC8-202ENST00000381118 MT1BP07438 61 aa3.43□□□□□ -1.86
ERCC8-202ENST00000381118 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
ERCC8-202ENST00000381118 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
ERCC8-202ENST00000381118 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
ERCC8-202ENST00000381118 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.86
ERCC8-202ENST00000381118 ROMO1P60602 79 aa3.38□□□□□ -1.87
ERCC8-202ENST00000381118 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
ERCC8-202ENST00000381118 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
ERCC8-202ENST00000381118 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
ERCC8-202ENST00000381118 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
ERCC8-202ENST00000381118 MT1XP80297 61 aa3.32□□□□□ -1.88
ERCC8-202ENST00000381118 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
ERCC8-202ENST00000381118 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
ERCC8-202ENST00000381118 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
ERCC8-202ENST00000381118 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
ERCC8-202ENST00000381118 TNP1P09430 55 aa3.25□□□□□ -1.89
ERCC8-202ENST00000381118 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
ERCC8-202ENST00000381118 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
ERCC8-202ENST00000381118 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
ERCC8-202ENST00000381118 KMT2DO14686 5537 aa3.2□□□□□ -1.9
ERCC8-202ENST00000381118 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms