RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
HLA-DQA1-202ENST00000374949 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
HLA-DQA1-202ENST00000374949 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
HLA-DQA1-202ENST00000374949 SSPOA2VEC9 5147 aa5.58□□□□□ -1.52
HLA-DQA1-202ENST00000374949 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
HLA-DQA1-202ENST00000374949 USH2AO75445 5202 aa5.55□□□□□ -1.52
HLA-DQA1-202ENST00000374949 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
HLA-DQA1-202ENST00000374949 A8MUN3 132 aa5.52□□□□□ -1.53
HLA-DQA1-202ENST00000374949 ACYP2P14621 99 aa5.52□□□□□ -1.53
HLA-DQA1-202ENST00000374949 RBM12B-AS1Q9P1G2 102 aa5.52□□□□□ -1.53
HLA-DQA1-202ENST00000374949 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
HLA-DQA1-202ENST00000374949 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
HLA-DQA1-202ENST00000374949 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
HLA-DQA1-202ENST00000374949 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
HLA-DQA1-202ENST00000374949 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
HLA-DQA1-202ENST00000374949 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.54
HLA-DQA1-202ENST00000374949 COA5Q86WW8 74 aa5.45□□□□□ -1.54
HLA-DQA1-202ENST00000374949 RPS28P62857 69 aaKnown RBP5.44□□□□□ -1.54
HLA-DQA1-202ENST00000374949 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
HLA-DQA1-202ENST00000374949 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
HLA-DQA1-202ENST00000374949 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
HLA-DQA1-202ENST00000374949 MT2AP02795 61 aa5.39□□□□□ -1.55
HLA-DQA1-202ENST00000374949 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
HLA-DQA1-202ENST00000374949 S4R3F8 94 aa5.37□□□□□ -1.55
HLA-DQA1-202ENST00000374949 LCE2BO14633 110 aa5.36□□□□□ -1.55
HLA-DQA1-202ENST00000374949 MT1FP04733 61 aa5.36□□□□□ -1.55
HLA-DQA1-202ENST00000374949 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
HLA-DQA1-202ENST00000374949 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
HLA-DQA1-202ENST00000374949 LCA10Q71F78 164 aa5.33□□□□□ -1.56
HLA-DQA1-202ENST00000374949 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
HLA-DQA1-202ENST00000374949 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
HLA-DQA1-202ENST00000374949 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
HLA-DQA1-202ENST00000374949 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
HLA-DQA1-202ENST00000374949 V9GYY9 64 aa5.25□□□□□ -1.57
HLA-DQA1-202ENST00000374949 Q1T7F1 81 aa5.24□□□□□ -1.57
HLA-DQA1-202ENST00000374949 LINC01558Q9Y6Z2 57 aa5.22□□□□□ -1.57
HLA-DQA1-202ENST00000374949 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
HLA-DQA1-202ENST00000374949 SEC61GP60059 68 aa5.19□□□□□ -1.58
HLA-DQA1-202ENST00000374949 NEBP20929 6669 aa5.19□□□□□ -1.58
HLA-DQA1-202ENST00000374949 A0A1B0GU69 56 aa5.17□□□□□ -1.58
HLA-DQA1-202ENST00000374949 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
HLA-DQA1-202ENST00000374949 H0YAA0 97 aa5.14□□□□□ -1.59
HLA-DQA1-202ENST00000374949 PSPHP1O15172 72 aa5.13□□□□□ -1.59
HLA-DQA1-202ENST00000374949 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
HLA-DQA1-202ENST00000374949 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
HLA-DQA1-202ENST00000374949 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
HLA-DQA1-202ENST00000374949 Q5VV11 94 aa5.08□□□□□ -1.6
HLA-DQA1-202ENST00000374949 P0C880 135 aa5.06□□□□□ -1.6
HLA-DQA1-202ENST00000374949 A0A1B0GU33 70 aa5.05□□□□□ -1.6
HLA-DQA1-202ENST00000374949 UQCR11O14957 56 aa5□□□□□ -1.61
HLA-DQA1-202ENST00000374949 A6NED7 52 aa4.99□□□□□ -1.61
HLA-DQA1-202ENST00000374949 M0QZ58 72 aa4.96□□□□□ -1.62
HLA-DQA1-202ENST00000374949 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
HLA-DQA1-202ENST00000374949 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
HLA-DQA1-202ENST00000374949 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
HLA-DQA1-202ENST00000374949 R4GN34 69 aa4.94□□□□□ -1.62
HLA-DQA1-202ENST00000374949 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
HLA-DQA1-202ENST00000374949 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
HLA-DQA1-202ENST00000374949 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
HLA-DQA1-202ENST00000374949 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
HLA-DQA1-202ENST00000374949 A6NN06 94 aa4.87□□□□□ -1.63
HLA-DQA1-202ENST00000374949 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
HLA-DQA1-202ENST00000374949 A8MU10 97 aa4.85□□□□□ -1.63
HLA-DQA1-202ENST00000374949 A0A0D9SG42 100 aa4.84□□□□□ -1.63
HLA-DQA1-202ENST00000374949 LINC01554Q52M75 96 aa4.84□□□□□ -1.63
HLA-DQA1-202ENST00000374949 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
HLA-DQA1-202ENST00000374949 MT1BP07438 61 aa4.82□□□□□ -1.64
HLA-DQA1-202ENST00000374949 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
HLA-DQA1-202ENST00000374949 KMT2DO14686 5537 aa4.79□□□□□ -1.64
HLA-DQA1-202ENST00000374949 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
HLA-DQA1-202ENST00000374949 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
HLA-DQA1-202ENST00000374949 K7ERS5 55 aa4.76□□□□□ -1.65
HLA-DQA1-202ENST00000374949 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
HLA-DQA1-202ENST00000374949 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
HLA-DQA1-202ENST00000374949 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
HLA-DQA1-202ENST00000374949 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
HLA-DQA1-202ENST00000374949 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
HLA-DQA1-202ENST00000374949 PLAC4Q8WY50 150 aa4.71□□□□□ -1.66
HLA-DQA1-202ENST00000374949 KRTAP2-3P0C7H8 128 aa4.67□□□□□ -1.66
HLA-DQA1-202ENST00000374949 KRTAP2-4Q9BYR9 128 aa4.67□□□□□ -1.66
HLA-DQA1-202ENST00000374949 CAMK2N1Q7Z7J9 78 aa4.63□□□□□ -1.67
HLA-DQA1-202ENST00000374949 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
HLA-DQA1-202ENST00000374949 SPRR2EP22531 72 aa4.6□□□□□ -1.67
HLA-DQA1-202ENST00000374949 SPRR2BP35325 72 aa4.6□□□□□ -1.67
HLA-DQA1-202ENST00000374949 SPRR2AP35326 72 aa4.6□□□□□ -1.67
HLA-DQA1-202ENST00000374949 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
HLA-DQA1-202ENST00000374949 ROMO1P60602 79 aa4.53□□□□□ -1.68
HLA-DQA1-202ENST00000374949 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
HLA-DQA1-202ENST00000374949 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
HLA-DQA1-202ENST00000374949 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
HLA-DQA1-202ENST00000374949 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
HLA-DQA1-202ENST00000374949 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
HLA-DQA1-202ENST00000374949 MT1XP80297 61 aa4.48□□□□□ -1.69
HLA-DQA1-202ENST00000374949 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
HLA-DQA1-202ENST00000374949 SPRR2DP22532 72 aa4.45□□□□□ -1.7
HLA-DQA1-202ENST00000374949 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
HLA-DQA1-202ENST00000374949 TNP1P09430 55 aa4.4□□□□□ -1.71
HLA-DQA1-202ENST00000374949 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
HLA-DQA1-202ENST00000374949 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
HLA-DQA1-202ENST00000374949 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms