RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
TPM3-211ENST00000368531 H3BPC8 53 aa6.81□□□□□ -1.32
TPM3-211ENST00000368531 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
TPM3-211ENST00000368531 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
TPM3-211ENST00000368531 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
TPM3-211ENST00000368531 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
TPM3-211ENST00000368531 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
TPM3-211ENST00000368531 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
TPM3-211ENST00000368531 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
TPM3-211ENST00000368531 S4R3F8 94 aa6.72□□□□□ -1.33
TPM3-211ENST00000368531 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
TPM3-211ENST00000368531 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
TPM3-211ENST00000368531 LCA10Q71F78 164 aa6.67□□□□□ -1.34
TPM3-211ENST00000368531 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
TPM3-211ENST00000368531 A8MUN3 132 aa6.64□□□□□ -1.35
TPM3-211ENST00000368531 COX7CP15954 63 aa6.63□□□□□ -1.35
TPM3-211ENST00000368531 H3BS24 57 aa6.62□□□□□ -1.35
TPM3-211ENST00000368531 MT2AP02795 61 aa6.62□□□□□ -1.35
TPM3-211ENST00000368531 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
TPM3-211ENST00000368531 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
TPM3-211ENST00000368531 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
TPM3-211ENST00000368531 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
TPM3-211ENST00000368531 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
TPM3-211ENST00000368531 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
TPM3-211ENST00000368531 MT1FP04733 61 aa6.57□□□□□ -1.36
TPM3-211ENST00000368531 NDUFC1O43677 76 aa6.56□□□□□ -1.36
TPM3-211ENST00000368531 ACYP2P14621 99 aa6.53□□□□□ -1.36
TPM3-211ENST00000368531 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
TPM3-211ENST00000368531 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
TPM3-211ENST00000368531 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
TPM3-211ENST00000368531 CCDC179H3BU77 68 aa6.47□□□□□ -1.37
TPM3-211ENST00000368531 H7BZZ5 65 aa6.45□□□□□ -1.38
TPM3-211ENST00000368531 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
TPM3-211ENST00000368531 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
TPM3-211ENST00000368531 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
TPM3-211ENST00000368531 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
TPM3-211ENST00000368531 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
TPM3-211ENST00000368531 COA5Q86WW8 74 aa6.35□□□□□ -1.39
TPM3-211ENST00000368531 H0YAA0 97 aa6.34□□□□□ -1.39
TPM3-211ENST00000368531 P0C880 135 aa6.27□□□□□ -1.41
TPM3-211ENST00000368531 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
TPM3-211ENST00000368531 CRIPTQ9P021 101 aa6.24□□□□□ -1.41
TPM3-211ENST00000368531 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
TPM3-211ENST00000368531 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
TPM3-211ENST00000368531 TMEM258P61165 79 aa6.2□□□□□ -1.42
TPM3-211ENST00000368531 R4GN34 69 aa6.16□□□□□ -1.42
TPM3-211ENST00000368531 M0QZ58 72 aa6.15□□□□□ -1.42
TPM3-211ENST00000368531 Q5VV11 94 aa6.14□□□□□ -1.43
TPM3-211ENST00000368531 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
TPM3-211ENST00000368531 MT1BP07438 61 aa6.12□□□□□ -1.43
TPM3-211ENST00000368531 PCP4P48539 62 aa6.12□□□□□ -1.43
TPM3-211ENST00000368531 SEC61GP60059 68 aa6.11□□□□□ -1.43
TPM3-211ENST00000368531 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
TPM3-211ENST00000368531 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
TPM3-211ENST00000368531 LINC01554Q52M75 96 aa6.08□□□□□ -1.44
TPM3-211ENST00000368531 USH2AO75445 5202 aa6.05□□□□□ -1.44
TPM3-211ENST00000368531 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
TPM3-211ENST00000368531 A0A1B0GU69 56 aa6.02□□□□□ -1.45
TPM3-211ENST00000368531 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
TPM3-211ENST00000368531 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
TPM3-211ENST00000368531 A0A1B0GU33 70 aa5.97□□□□□ -1.45
TPM3-211ENST00000368531 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
TPM3-211ENST00000368531 A6NN06 94 aa5.93□□□□□ -1.46
TPM3-211ENST00000368531 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
TPM3-211ENST00000368531 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
TPM3-211ENST00000368531 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
TPM3-211ENST00000368531 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
TPM3-211ENST00000368531 A0A0D9SG42 100 aa5.89□□□□□ -1.47
TPM3-211ENST00000368531 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
TPM3-211ENST00000368531 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
TPM3-211ENST00000368531 MT1XP80297 61 aa5.82□□□□□ -1.48
TPM3-211ENST00000368531 SMIM26A0A096LP01 95 aa5.8□□□□□ -1.48
TPM3-211ENST00000368531 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
TPM3-211ENST00000368531 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
TPM3-211ENST00000368531 A8MU10 97 aa5.79□□□□□ -1.48
TPM3-211ENST00000368531 V9GYY9 64 aa5.79□□□□□ -1.48
TPM3-211ENST00000368531 PSPHP1O15172 72 aa5.78□□□□□ -1.48
TPM3-211ENST00000368531 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
TPM3-211ENST00000368531 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
TPM3-211ENST00000368531 Q1T7F1 81 aa5.77□□□□□ -1.49
TPM3-211ENST00000368531 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
TPM3-211ENST00000368531 UQCR11O14957 56 aa5.73□□□□□ -1.49
TPM3-211ENST00000368531 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
TPM3-211ENST00000368531 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
TPM3-211ENST00000368531 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
TPM3-211ENST00000368531 A6NED7 52 aa5.59□□□□□ -1.51
TPM3-211ENST00000368531 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
TPM3-211ENST00000368531 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
TPM3-211ENST00000368531 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
TPM3-211ENST00000368531 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
TPM3-211ENST00000368531 K7ERS5 55 aa5.47□□□□□ -1.53
TPM3-211ENST00000368531 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
TPM3-211ENST00000368531 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
TPM3-211ENST00000368531 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
TPM3-211ENST00000368531 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
TPM3-211ENST00000368531 TNP1P09430 55 aa5.37□□□□□ -1.55
TPM3-211ENST00000368531 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
TPM3-211ENST00000368531 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
TPM3-211ENST00000368531 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
TPM3-211ENST00000368531 KMT2DO14686 5537 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms