RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 CHKB-CPT1BH3BT56 60 aa4.17□□□□□ -1.74
MUC1-209ENST00000368396 TPRXLQ17RH7 258 aa4.16□□□□□ -1.74
MUC1-209ENST00000368396 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
MUC1-209ENST00000368396 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
MUC1-209ENST00000368396 PSPHP1O15172 72 aa4.14□□□□□ -1.75
MUC1-209ENST00000368396 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
MUC1-209ENST00000368396 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
MUC1-209ENST00000368396 Q5VV11 94 aa4.12□□□□□ -1.75
MUC1-209ENST00000368396 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
MUC1-209ENST00000368396 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
MUC1-209ENST00000368396 LRP2P98164 4655 aa4.1□□□□□ -1.75
MUC1-209ENST00000368396 LPAP08519 4548 aa4.09□□□□□ -1.75
MUC1-209ENST00000368396 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
MUC1-209ENST00000368396 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
MUC1-209ENST00000368396 MUC17Q685J3 4493 aa4.09□□□□□ -1.75
MUC1-209ENST00000368396 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
MUC1-209ENST00000368396 SPTSSBQ8NFR3 76 aa4.07□□□□□ -1.76
MUC1-209ENST00000368396 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
MUC1-209ENST00000368396 A0A1B0GU69 56 aa4.04□□□□□ -1.76
MUC1-209ENST00000368396 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
MUC1-209ENST00000368396 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
MUC1-209ENST00000368396 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
MUC1-209ENST00000368396 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
MUC1-209ENST00000368396 A6NED7 52 aa4.01□□□□□ -1.77
MUC1-209ENST00000368396 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
MUC1-209ENST00000368396 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
MUC1-209ENST00000368396 SEC61GP60059 68 aa3.98□□□□□ -1.77
MUC1-209ENST00000368396 LCA10Q71F78 164 aa3.98□□□□□ -1.77
MUC1-209ENST00000368396 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
MUC1-209ENST00000368396 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
MUC1-209ENST00000368396 S4R3F8 94 aa3.98□□□□□ -1.77
MUC1-209ENST00000368396 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
MUC1-209ENST00000368396 HERC1Q15751 4861 aa3.96□□□□□ -1.78
MUC1-209ENST00000368396 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
MUC1-209ENST00000368396 A8MU10 97 aa3.95□□□□□ -1.78
MUC1-209ENST00000368396 UQCR11O14957 56 aa3.94□□□□□ -1.78
MUC1-209ENST00000368396 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
MUC1-209ENST00000368396 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
MUC1-209ENST00000368396 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
MUC1-209ENST00000368396 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
MUC1-209ENST00000368396 A0A1B0GU33 70 aa3.88□□□□□ -1.79
MUC1-209ENST00000368396 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
MUC1-209ENST00000368396 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
MUC1-209ENST00000368396 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
MUC1-209ENST00000368396 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
MUC1-209ENST00000368396 H0YAA0 97 aa3.85□□□□□ -1.79
MUC1-209ENST00000368396 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
MUC1-209ENST00000368396 A6NN06 94 aa3.83□□□□□ -1.8
MUC1-209ENST00000368396 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
MUC1-209ENST00000368396 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
MUC1-209ENST00000368396 P0C880 135 aa3.81□□□□□ -1.8
MUC1-209ENST00000368396 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
MUC1-209ENST00000368396 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
MUC1-209ENST00000368396 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
MUC1-209ENST00000368396 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
MUC1-209ENST00000368396 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
MUC1-209ENST00000368396 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
MUC1-209ENST00000368396 MUC2Q02817 5179 aa3.74□□□□□ -1.81
MUC1-209ENST00000368396 M0QZ58 72 aa3.73□□□□□ -1.81
MUC1-209ENST00000368396 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
MUC1-209ENST00000368396 K7ERS5 55 aa3.7□□□□□ -1.82
MUC1-209ENST00000368396 A0A0D9SG42 100 aa3.69□□□□□ -1.82
MUC1-209ENST00000368396 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
MUC1-209ENST00000368396 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
MUC1-209ENST00000368396 R4GN34 69 aa3.65□□□□□ -1.83
MUC1-209ENST00000368396 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
MUC1-209ENST00000368396 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
MUC1-209ENST00000368396 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
MUC1-209ENST00000368396 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
MUC1-209ENST00000368396 MT1HP80294 61 aa3.62□□□□□ -1.83
MUC1-209ENST00000368396 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
MUC1-209ENST00000368396 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
MUC1-209ENST00000368396 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
MUC1-209ENST00000368396 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
MUC1-209ENST00000368396 ROMO1P60602 79 aa3.58□□□□□ -1.84
MUC1-209ENST00000368396 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
MUC1-209ENST00000368396 M0R2T5 61 aa3.57□□□□□ -1.84
MUC1-209ENST00000368396 MT2AP02795 61 aa3.52□□□□□ -1.85
MUC1-209ENST00000368396 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
MUC1-209ENST00000368396 MT1FP04733 61 aa3.5□□□□□ -1.85
MUC1-209ENST00000368396 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
MUC1-209ENST00000368396 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
MUC1-209ENST00000368396 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
MUC1-209ENST00000368396 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
MUC1-209ENST00000368396 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
MUC1-209ENST00000368396 KRTAP19-8Q3LI54 63 aa3.41□□□□□ -1.86
MUC1-209ENST00000368396 PLAC4Q8WY50 150 aa3.4□□□□□ -1.87
MUC1-209ENST00000368396 MT1BP07438 61 aa3.34□□□□□ -1.87
MUC1-209ENST00000368396 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
MUC1-209ENST00000368396 TNP1P09430 55 aa3.3□□□□□ -1.88
MUC1-209ENST00000368396 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
MUC1-209ENST00000368396 MT1XP80297 61 aa3.26□□□□□ -1.89
MUC1-209ENST00000368396 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
MUC1-209ENST00000368396 USH2AO75445 5202 aa3.19□□□□□ -1.9
MUC1-209ENST00000368396 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
MUC1-209ENST00000368396 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
MUC1-209ENST00000368396 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
MUC1-209ENST00000368396 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
MUC1-209ENST00000368396 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
MUC1-209ENST00000368396 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms