RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ACYP2P14621 99 aa5.96□□□□□ -1.45
H3F3A-202ENST00000366814 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.45
H3F3A-202ENST00000366814 A8MUU9 505 aa5.96□□□□□ -1.46
H3F3A-202ENST00000366814 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.46
H3F3A-202ENST00000366814 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
H3F3A-202ENST00000366814 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
H3F3A-202ENST00000366814 SEC61GP60059 68 aa5.92□□□□□ -1.46
H3F3A-202ENST00000366814 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.46
H3F3A-202ENST00000366814 LRP2P98164 4655 aa5.9□□□□□ -1.47
H3F3A-202ENST00000366814 Q75L30 129 aa5.9□□□□□ -1.47
H3F3A-202ENST00000366814 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
H3F3A-202ENST00000366814 A8MUN3 132 aa5.85□□□□□ -1.47
H3F3A-202ENST00000366814 PSPHP1O15172 72 aa5.85□□□□□ -1.47
H3F3A-202ENST00000366814 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
H3F3A-202ENST00000366814 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
H3F3A-202ENST00000366814 LPAP08519 4548 aa5.82□□□□□ -1.48
H3F3A-202ENST00000366814 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
H3F3A-202ENST00000366814 SPINK7P58062 85 aa5.81□□□□□ -1.48
H3F3A-202ENST00000366814 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
H3F3A-202ENST00000366814 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
H3F3A-202ENST00000366814 RPL37P61927 97 aaKnown RBP5.79□□□□□ -1.48
H3F3A-202ENST00000366814 Q5VV11 94 aa5.79□□□□□ -1.48
H3F3A-202ENST00000366814 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
H3F3A-202ENST00000366814 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
H3F3A-202ENST00000366814 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
H3F3A-202ENST00000366814 SPTSSBQ8NFR3 76 aa5.76□□□□□ -1.49
H3F3A-202ENST00000366814 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
H3F3A-202ENST00000366814 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
H3F3A-202ENST00000366814 A6NED7 52 aa5.71□□□□□ -1.5
H3F3A-202ENST00000366814 KRTAP9-3Q9BYQ3 159 aa5.71□□□□□ -1.5
H3F3A-202ENST00000366814 A0A1B0GU69 56 aa5.71□□□□□ -1.5
H3F3A-202ENST00000366814 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
H3F3A-202ENST00000366814 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
H3F3A-202ENST00000366814 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
H3F3A-202ENST00000366814 MUC2Q02817 5179 aa5.59□□□□□ -1.51
H3F3A-202ENST00000366814 UQCR11O14957 56 aa5.58□□□□□ -1.52
H3F3A-202ENST00000366814 SEC61BP60468 96 aaKnown RBP5.58□□□□□ -1.52
H3F3A-202ENST00000366814 LCA10Q71F78 164 aa5.58□□□□□ -1.52
H3F3A-202ENST00000366814 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
H3F3A-202ENST00000366814 RBM12B-AS1Q9P1G2 102 aa5.54□□□□□ -1.52
H3F3A-202ENST00000366814 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
H3F3A-202ENST00000366814 S4R3F8 94 aa5.54□□□□□ -1.52
H3F3A-202ENST00000366814 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
H3F3A-202ENST00000366814 A8MU10 97 aa5.52□□□□□ -1.53
H3F3A-202ENST00000366814 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
H3F3A-202ENST00000366814 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
H3F3A-202ENST00000366814 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
H3F3A-202ENST00000366814 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
H3F3A-202ENST00000366814 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
H3F3A-202ENST00000366814 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
H3F3A-202ENST00000366814 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
H3F3A-202ENST00000366814 A0A1B0GU33 70 aa5.45□□□□□ -1.54
H3F3A-202ENST00000366814 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
H3F3A-202ENST00000366814 A6NN06 94 aa5.38□□□□□ -1.55
H3F3A-202ENST00000366814 H0YAA0 97 aa5.36□□□□□ -1.55
H3F3A-202ENST00000366814 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
H3F3A-202ENST00000366814 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
H3F3A-202ENST00000366814 K7ERS5 55 aa5.3□□□□□ -1.56
H3F3A-202ENST00000366814 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
H3F3A-202ENST00000366814 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
H3F3A-202ENST00000366814 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
H3F3A-202ENST00000366814 MT1HP80294 61 aa5.27□□□□□ -1.57
H3F3A-202ENST00000366814 P0C880 135 aa5.26□□□□□ -1.57
H3F3A-202ENST00000366814 M0R2T5 61 aa5.24□□□□□ -1.57
H3F3A-202ENST00000366814 M0QZ58 72 aa5.21□□□□□ -1.58
H3F3A-202ENST00000366814 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
H3F3A-202ENST00000366814 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
H3F3A-202ENST00000366814 A0A0D9SG42 100 aa5.19□□□□□ -1.58
H3F3A-202ENST00000366814 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
H3F3A-202ENST00000366814 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
H3F3A-202ENST00000366814 FLGP20930 4061 aaPredicted RBP5.13□□□□□ -1.59
H3F3A-202ENST00000366814 R4GN34 69 aa5.13□□□□□ -1.59
H3F3A-202ENST00000366814 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
H3F3A-202ENST00000366814 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
H3F3A-202ENST00000366814 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
H3F3A-202ENST00000366814 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
H3F3A-202ENST00000366814 ROMO1P60602 79 aa5.05□□□□□ -1.6
H3F3A-202ENST00000366814 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
H3F3A-202ENST00000366814 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
H3F3A-202ENST00000366814 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
H3F3A-202ENST00000366814 CRIPTQ9P021 101 aa5□□□□□ -1.61
H3F3A-202ENST00000366814 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
H3F3A-202ENST00000366814 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
H3F3A-202ENST00000366814 MT2AP02795 61 aa4.92□□□□□ -1.62
H3F3A-202ENST00000366814 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
H3F3A-202ENST00000366814 MT1FP04733 61 aa4.88□□□□□ -1.63
H3F3A-202ENST00000366814 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.63
H3F3A-202ENST00000366814 USH2AO75445 5202 aa4.79□□□□□ -1.64
H3F3A-202ENST00000366814 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
H3F3A-202ENST00000366814 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
H3F3A-202ENST00000366814 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
H3F3A-202ENST00000366814 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
H3F3A-202ENST00000366814 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
H3F3A-202ENST00000366814 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.67
H3F3A-202ENST00000366814 TNP1P09430 55 aa4.64□□□□□ -1.67
H3F3A-202ENST00000366814 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
H3F3A-202ENST00000366814 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
H3F3A-202ENST00000366814 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
H3F3A-202ENST00000366814 MT1BP07438 61 aa4.52□□□□□ -1.69
H3F3A-202ENST00000366814 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms