RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FAM236CP0DP71 79 aa6□□□□□ -1.45
CSNK1E-202ENST00000366216 ATP5EP56381 51 aaPredicted RBP6□□□□□ -1.45
CSNK1E-202ENST00000366216 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
CSNK1E-202ENST00000366216 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
CSNK1E-202ENST00000366216 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
CSNK1E-202ENST00000366216 USH2AO75445 5202 aa5.97□□□□□ -1.45
CSNK1E-202ENST00000366216 M0R2T5 61 aa5.94□□□□□ -1.46
CSNK1E-202ENST00000366216 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
CSNK1E-202ENST00000366216 PCOTHQ58A44 107 aa5.94□□□□□ -1.46
CSNK1E-202ENST00000366216 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
CSNK1E-202ENST00000366216 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
CSNK1E-202ENST00000366216 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
CSNK1E-202ENST00000366216 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
CSNK1E-202ENST00000366216 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
CSNK1E-202ENST00000366216 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
CSNK1E-202ENST00000366216 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
CSNK1E-202ENST00000366216 HRES1P13985 223 aa5.88□□□□□ -1.47
CSNK1E-202ENST00000366216 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
CSNK1E-202ENST00000366216 SPINK7P58062 85 aa5.85□□□□□ -1.47
CSNK1E-202ENST00000366216 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
CSNK1E-202ENST00000366216 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
CSNK1E-202ENST00000366216 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
CSNK1E-202ENST00000366216 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
CSNK1E-202ENST00000366216 ACYP2P14621 99 aa5.79□□□□□ -1.48
CSNK1E-202ENST00000366216 A8MUN3 132 aa5.77□□□□□ -1.49
CSNK1E-202ENST00000366216 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
CSNK1E-202ENST00000366216 COA5Q86WW8 74 aa5.76□□□□□ -1.49
CSNK1E-202ENST00000366216 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
CSNK1E-202ENST00000366216 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
CSNK1E-202ENST00000366216 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
CSNK1E-202ENST00000366216 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
CSNK1E-202ENST00000366216 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
CSNK1E-202ENST00000366216 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
CSNK1E-202ENST00000366216 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
CSNK1E-202ENST00000366216 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
CSNK1E-202ENST00000366216 Q1T7F1 81 aa5.63□□□□□ -1.51
CSNK1E-202ENST00000366216 V9GYY9 64 aa5.63□□□□□ -1.51
CSNK1E-202ENST00000366216 RBM12B-AS1Q9P1G2 102 aa5.62□□□□□ -1.51
CSNK1E-202ENST00000366216 SPTSSBQ8NFR3 76 aa5.58□□□□□ -1.52
CSNK1E-202ENST00000366216 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
CSNK1E-202ENST00000366216 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
CSNK1E-202ENST00000366216 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
CSNK1E-202ENST00000366216 MT2AP02795 61 aa5.55□□□□□ -1.52
CSNK1E-202ENST00000366216 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
CSNK1E-202ENST00000366216 MT1FP04733 61 aa5.52□□□□□ -1.53
CSNK1E-202ENST00000366216 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
CSNK1E-202ENST00000366216 S4R3F8 94 aa5.52□□□□□ -1.53
CSNK1E-202ENST00000366216 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
CSNK1E-202ENST00000366216 LCA10Q71F78 164 aa5.5□□□□□ -1.53
CSNK1E-202ENST00000366216 NEBP20929 6669 aa5.48□□□□□ -1.53
CSNK1E-202ENST00000366216 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
CSNK1E-202ENST00000366216 PSPHP1O15172 72 aa5.47□□□□□ -1.53
CSNK1E-202ENST00000366216 KRTAP10-10P60014 251 aa5.46□□□□□ -1.54
CSNK1E-202ENST00000366216 A0A1B0GU69 56 aa5.45□□□□□ -1.54
CSNK1E-202ENST00000366216 Q5VV11 94 aa5.45□□□□□ -1.54
CSNK1E-202ENST00000366216 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
CSNK1E-202ENST00000366216 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
CSNK1E-202ENST00000366216 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
CSNK1E-202ENST00000366216 SEC61GP60059 68 aa5.42□□□□□ -1.54
CSNK1E-202ENST00000366216 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
CSNK1E-202ENST00000366216 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
CSNK1E-202ENST00000366216 A6NED7 52 aa5.32□□□□□ -1.56
CSNK1E-202ENST00000366216 H0YAA0 97 aa5.32□□□□□ -1.56
CSNK1E-202ENST00000366216 UQCR11O14957 56 aa5.3□□□□□ -1.56
CSNK1E-202ENST00000366216 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
CSNK1E-202ENST00000366216 A0A1B0GU33 70 aa5.28□□□□□ -1.56
CSNK1E-202ENST00000366216 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
CSNK1E-202ENST00000366216 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
CSNK1E-202ENST00000366216 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
CSNK1E-202ENST00000366216 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
CSNK1E-202ENST00000366216 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
CSNK1E-202ENST00000366216 P0C880 135 aa5.24□□□□□ -1.57
CSNK1E-202ENST00000366216 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
CSNK1E-202ENST00000366216 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
CSNK1E-202ENST00000366216 PRO0628Q9UI54 55 aa5.2□□□□□ -1.58
CSNK1E-202ENST00000366216 A8MU10 97 aa5.17□□□□□ -1.58
CSNK1E-202ENST00000366216 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
CSNK1E-202ENST00000366216 M0QZ58 72 aa5.16□□□□□ -1.58
CSNK1E-202ENST00000366216 KMT2DO14686 5537 aa5.15□□□□□ -1.59
CSNK1E-202ENST00000366216 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
CSNK1E-202ENST00000366216 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
CSNK1E-202ENST00000366216 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
CSNK1E-202ENST00000366216 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
CSNK1E-202ENST00000366216 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
CSNK1E-202ENST00000366216 R4GN34 69 aa5.08□□□□□ -1.6
CSNK1E-202ENST00000366216 A6NN06 94 aa5.06□□□□□ -1.6
CSNK1E-202ENST00000366216 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
CSNK1E-202ENST00000366216 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CSNK1E-202ENST00000366216 A0A0D9SG42 100 aa5.02□□□□□ -1.61
CSNK1E-202ENST00000366216 K7ERS5 55 aa5.01□□□□□ -1.61
CSNK1E-202ENST00000366216 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
CSNK1E-202ENST00000366216 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
CSNK1E-202ENST00000366216 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
CSNK1E-202ENST00000366216 MT1BP07438 61 aa4.95□□□□□ -1.62
CSNK1E-202ENST00000366216 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
CSNK1E-202ENST00000366216 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
CSNK1E-202ENST00000366216 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
CSNK1E-202ENST00000366216 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
CSNK1E-202ENST00000366216 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
CSNK1E-202ENST00000366216 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms