RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
RNU1-55P-201ENST00000365510 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
RNU1-55P-201ENST00000365510 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
RNU1-55P-201ENST00000365510 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
RNU1-55P-201ENST00000365510 M0R2T5 61 aa3.4□□□□□ -1.87
RNU1-55P-201ENST00000365510 DMAC1Q96GE9 116 aa3.4□□□□□ -1.87
RNU1-55P-201ENST00000365510 USH2AO75445 5202 aa3.39□□□□□ -1.87
RNU1-55P-201ENST00000365510 ATP5EP56381 51 aaPredicted RBP3.38□□□□□ -1.87
RNU1-55P-201ENST00000365510 TMEM258P61165 79 aa3.38□□□□□ -1.87
RNU1-55P-201ENST00000365510 H1FX-AS1Q4G0G2 97 aa3.38□□□□□ -1.87
RNU1-55P-201ENST00000365510 KRTAP3-1Q9BYR8 98 aa3.37□□□□□ -1.87
RNU1-55P-201ENST00000365510 ACYP2P14621 99 aa3.36□□□□□ -1.87
RNU1-55P-201ENST00000365510 S4R3F8 94 aa3.35□□□□□ -1.87
RNU1-55P-201ENST00000365510 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
RNU1-55P-201ENST00000365510 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
RNU1-55P-201ENST00000365510 LCA10Q71F78 164 aa3.31□□□□□ -1.88
RNU1-55P-201ENST00000365510 COA5Q86WW8 74 aa3.31□□□□□ -1.88
RNU1-55P-201ENST00000365510 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
RNU1-55P-201ENST00000365510 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
RNU1-55P-201ENST00000365510 SPTSSBQ8NFR3 76 aa3.29□□□□□ -1.88
RNU1-55P-201ENST00000365510 LCE2BO14633 110 aa3.28□□□□□ -1.88
RNU1-55P-201ENST00000365510 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
RNU1-55P-201ENST00000365510 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
RNU1-55P-201ENST00000365510 KRTAP3-3Q9BYR6 98 aa3.26□□□□□ -1.89
RNU1-55P-201ENST00000365510 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
RNU1-55P-201ENST00000365510 MT2AP02795 61 aa3.24□□□□□ -1.89
RNU1-55P-201ENST00000365510 MT1FP04733 61 aa3.23□□□□□ -1.89
RNU1-55P-201ENST00000365510 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
RNU1-55P-201ENST00000365510 H0YAA0 97 aa3.2□□□□□ -1.9
RNU1-55P-201ENST00000365510 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
RNU1-55P-201ENST00000365510 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
RNU1-55P-201ENST00000365510 SEC61GP60059 68 aa3.18□□□□□ -1.9
RNU1-55P-201ENST00000365510 RPS28P62857 69 aaKnown RBP3.18□□□□□ -1.9
RNU1-55P-201ENST00000365510 ADM2Q7Z4H4 148 aa3.17□□□□□ -1.9
RNU1-55P-201ENST00000365510 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
RNU1-55P-201ENST00000365510 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
RNU1-55P-201ENST00000365510 V9GYY9 64 aa3.15□□□□□ -1.91
RNU1-55P-201ENST00000365510 A0A1B0GU69 56 aa3.14□□□□□ -1.91
RNU1-55P-201ENST00000365510 LINC01558Q9Y6Z2 57 aa3.13□□□□□ -1.91
RNU1-55P-201ENST00000365510 P0C880 135 aa3.12□□□□□ -1.91
RNU1-55P-201ENST00000365510 Q1T7F1 81 aa3.11□□□□□ -1.91
RNU1-55P-201ENST00000365510 KRTAP3-2Q9BYR7 98 aa3.11□□□□□ -1.91
RNU1-55P-201ENST00000365510 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
RNU1-55P-201ENST00000365510 NEBP20929 6669 aa3.1□□□□□ -1.91
RNU1-55P-201ENST00000365510 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
RNU1-55P-201ENST00000365510 R4GN34 69 aa3.09□□□□□ -1.91
RNU1-55P-201ENST00000365510 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
RNU1-55P-201ENST00000365510 A0A1B0GU33 70 aa3.07□□□□□ -1.92
RNU1-55P-201ENST00000365510 M0QZ58 72 aa3.07□□□□□ -1.92
RNU1-55P-201ENST00000365510 PSPHP1O15172 72 aa3.07□□□□□ -1.92
RNU1-55P-201ENST00000365510 SPRR2GQ9BYE4 73 aa3.04□□□□□ -1.92
RNU1-55P-201ENST00000365510 Q5VV11 94 aa3.03□□□□□ -1.92
RNU1-55P-201ENST00000365510 UQCR11O14957 56 aa3.02□□□□□ -1.93
RNU1-55P-201ENST00000365510 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
RNU1-55P-201ENST00000365510 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
RNU1-55P-201ENST00000365510 A6NED7 52 aa3□□□□□ -1.93
RNU1-55P-201ENST00000365510 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
RNU1-55P-201ENST00000365510 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
RNU1-55P-201ENST00000365510 A0A0D9SG42 100 aa2.98□□□□□ -1.93
RNU1-55P-201ENST00000365510 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
RNU1-55P-201ENST00000365510 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
RNU1-55P-201ENST00000365510 A6NN06 94 aa2.96□□□□□ -1.94
RNU1-55P-201ENST00000365510 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
RNU1-55P-201ENST00000365510 A8MU10 97 aa2.94□□□□□ -1.94
RNU1-55P-201ENST00000365510 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
RNU1-55P-201ENST00000365510 MT1BP07438 61 aa2.92□□□□□ -1.94
RNU1-55P-201ENST00000365510 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
RNU1-55P-201ENST00000365510 K7ERS5 55 aa2.91□□□□□ -1.94
RNU1-55P-201ENST00000365510 SPINT4Q6UDR6 99 aa2.91□□□□□ -1.94
RNU1-55P-201ENST00000365510 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
RNU1-55P-201ENST00000365510 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
RNU1-55P-201ENST00000365510 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
RNU1-55P-201ENST00000365510 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
RNU1-55P-201ENST00000365510 KMT2DO14686 5537 aa2.87□□□□□ -1.95
RNU1-55P-201ENST00000365510 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
RNU1-55P-201ENST00000365510 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
RNU1-55P-201ENST00000365510 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
RNU1-55P-201ENST00000365510 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
RNU1-55P-201ENST00000365510 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
RNU1-55P-201ENST00000365510 MT1XP80297 61 aa2.82□□□□□ -1.96
RNU1-55P-201ENST00000365510 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
RNU1-55P-201ENST00000365510 SPRR2EP22531 72 aa2.76□□□□□ -1.97
RNU1-55P-201ENST00000365510 SPRR2BP35325 72 aa2.76□□□□□ -1.97
RNU1-55P-201ENST00000365510 SPRR2AP35326 72 aa2.76□□□□□ -1.97
RNU1-55P-201ENST00000365510 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
RNU1-55P-201ENST00000365510 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
RNU1-55P-201ENST00000365510 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
RNU1-55P-201ENST00000365510 ROMO1P60602 79 aa2.73□□□□□ -1.97
RNU1-55P-201ENST00000365510 TNP1P09430 55 aa2.72□□□□□ -1.97
RNU1-55P-201ENST00000365510 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
RNU1-55P-201ENST00000365510 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP25-1Q3LHN0 102 aa2.69□□□□□ -1.98
RNU1-55P-201ENST00000365510 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
RNU1-55P-201ENST00000365510 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
RNU1-55P-201ENST00000365510 SPRR2DP22532 72 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms