RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
PTN-201ENST00000348225 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
PTN-201ENST00000348225 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
PTN-201ENST00000348225 V9GYY9 64 aa9.42□□□□□ -0.9
PTN-201ENST00000348225 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
PTN-201ENST00000348225 Q1T7F1 81 aa9.41□□□□□ -0.9
PTN-201ENST00000348225 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.9
PTN-201ENST00000348225 S4R3F8 94 aa9.34□□□□□ -0.91
PTN-201ENST00000348225 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
PTN-201ENST00000348225 LCA10Q71F78 164 aa9.29□□□□□ -0.92
PTN-201ENST00000348225 UBR4Q5T4S7 5183 aa9.27□□□□□ -0.93
PTN-201ENST00000348225 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
PTN-201ENST00000348225 PRR15LQ9BU68 103 aa9.24□□□□□ -0.93
PTN-201ENST00000348225 PSPHP1O15172 72 aa9.23□□□□□ -0.93
PTN-201ENST00000348225 MUC2Q02817 5179 aa9.2□□□□□ -0.94
PTN-201ENST00000348225 A0A1B0GU69 56 aa9.19□□□□□ -0.94
PTN-201ENST00000348225 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
PTN-201ENST00000348225 RNF213Q63HN8 5207 aa9.17□□□□□ -0.94
PTN-201ENST00000348225 SEC61GP60059 68 aa9.16□□□□□ -0.94
PTN-201ENST00000348225 Q5VV11 94 aa9.13□□□□□ -0.95
PTN-201ENST00000348225 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
PTN-201ENST00000348225 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
PTN-201ENST00000348225 SVIPQ8NHG7 77 aa9.05□□□□□ -0.96
PTN-201ENST00000348225 A6NED7 52 aa8.97□□□□□ -0.97
PTN-201ENST00000348225 H0YAA0 97 aa8.93□□□□□ -0.98
PTN-201ENST00000348225 UQCR11O14957 56 aa8.91□□□□□ -0.98
PTN-201ENST00000348225 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
PTN-201ENST00000348225 A0A1B0GU33 70 aa8.9□□□□□ -0.99
PTN-201ENST00000348225 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.99
PTN-201ENST00000348225 BRK1Q8WUW1 75 aa8.87□□□□□ -0.99
PTN-201ENST00000348225 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
PTN-201ENST00000348225 P0C880 135 aa8.83□□□□□ -1
PTN-201ENST00000348225 MT1HP80294 61 aa8.82□□□□□ -1
PTN-201ENST00000348225 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
PTN-201ENST00000348225 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
PTN-201ENST00000348225 M0R2T5 61 aa8.8□□□□□ -1
PTN-201ENST00000348225 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
PTN-201ENST00000348225 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
PTN-201ENST00000348225 A8MU10 97 aa8.69□□□□□ -1.02
PTN-201ENST00000348225 PRO0628Q9UI54 55 aa8.69□□□□□ -1.02
PTN-201ENST00000348225 M0QZ58 72 aa8.67□□□□□ -1.02
PTN-201ENST00000348225 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.03
PTN-201ENST00000348225 R4GN34 69 aa8.62□□□□□ -1.03
PTN-201ENST00000348225 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
PTN-201ENST00000348225 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
PTN-201ENST00000348225 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
PTN-201ENST00000348225 A0A0D9SG42 100 aa8.53□□□□□ -1.04
PTN-201ENST00000348225 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
PTN-201ENST00000348225 MT2AP02795 61 aa8.47□□□□□ -1.05
PTN-201ENST00000348225 KRTAP9-8Q9BYQ0 159 aa8.47□□□□□ -1.05
PTN-201ENST00000348225 K7ERS5 55 aa8.46□□□□□ -1.06
PTN-201ENST00000348225 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
PTN-201ENST00000348225 KRTAP10-10P60014 251 aa8.43□□□□□ -1.06
PTN-201ENST00000348225 MT1FP04733 61 aa8.42□□□□□ -1.06
PTN-201ENST00000348225 PMAIP1Q13794 54 aa8.39□□□□□ -1.07
PTN-201ENST00000348225 SPINT4Q6UDR6 99 aa8.35□□□□□ -1.07
PTN-201ENST00000348225 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
PTN-201ENST00000348225 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
PTN-201ENST00000348225 A6NN06 94 aa8.32□□□□□ -1.08
PTN-201ENST00000348225 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
PTN-201ENST00000348225 LCE3BQ5TA77 95 aa8.28□□□□□ -1.08
PTN-201ENST00000348225 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
PTN-201ENST00000348225 KRTAP4-12Q9BQ66 201 aa8.22□□□□□ -1.09
PTN-201ENST00000348225 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
PTN-201ENST00000348225 KRTAP9-9Q9BYP9 154 aa8.12□□□□□ -1.11
PTN-201ENST00000348225 KRTAP9-4Q9BYQ2 154 aa8.12□□□□□ -1.11
PTN-201ENST00000348225 KRTAP19-8Q3LI54 63 aa8.11□□□□□ -1.11
PTN-201ENST00000348225 PLAC4Q8WY50 150 aa8.11□□□□□ -1.11
PTN-201ENST00000348225 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
PTN-201ENST00000348225 ROMO1P60602 79 aa8.07□□□□□ -1.12
PTN-201ENST00000348225 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
PTN-201ENST00000348225 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
PTN-201ENST00000348225 MT1BP07438 61 aa7.97□□□□□ -1.13
PTN-201ENST00000348225 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
PTN-201ENST00000348225 PRAC1Q96KF2 57 aa7.82□□□□□ -1.16
PTN-201ENST00000348225 KRTAP4-7Q9BYR0 210 aa7.79□□□□□ -1.16
PTN-201ENST00000348225 FSIP2Q5CZC0 6907 aa7.78□□□□□ -1.16
PTN-201ENST00000348225 USH2AO75445 5202 aa7.77□□□□□ -1.17
PTN-201ENST00000348225 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
PTN-201ENST00000348225 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
PTN-201ENST00000348225 MT1XP80297 61 aa7.72□□□□□ -1.17
PTN-201ENST00000348225 KRTAP10-5P60370 271 aa7.71□□□□□ -1.17
PTN-201ENST00000348225 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.17
PTN-201ENST00000348225 TNP1P09430 55 aa7.7□□□□□ -1.18
PTN-201ENST00000348225 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
PTN-201ENST00000348225 KRTAP4-9Q9BYQ8 210 aa7.55□□□□□ -1.2
PTN-201ENST00000348225 SSPOA2VEC9 5147 aa7.53□□□□□ -1.2
PTN-201ENST00000348225 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
PTN-201ENST00000348225 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
PTN-201ENST00000348225 KRTAP23-1A1A580 65 aa7.47□□□□□ -1.21
PTN-201ENST00000348225 KRTAP4-2Q9BYR5 136 aa7.46□□□□□ -1.21
PTN-201ENST00000348225 KRTAP10-7P60409 375 aaPredicted RBP7.41□□□□□ -1.22
PTN-201ENST00000348225 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
PTN-201ENST00000348225 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
PTN-201ENST00000348225 KRTAP4-11Q9BYQ6 195 aa7.23□□□□□ -1.25
PTN-201ENST00000348225 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
PTN-201ENST00000348225 KRTAP8-1Q8IUC2 63 aa7.19□□□□□ -1.26
PTN-201ENST00000348225 LCE4AQ5TA78 99 aa7.16□□□□□ -1.26
PTN-201ENST00000348225 KMT2DO14686 5537 aa7.09□□□□□ -1.27
PTN-201ENST00000348225 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms