RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
CTSL-201ENST00000340342 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
CTSL-201ENST00000340342 CYP4F30PQ9H0H9 118 aa7.05□□□□□ -1.28
CTSL-201ENST00000340342 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
CTSL-201ENST00000340342 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
CTSL-201ENST00000340342 NDUFC1O43677 76 aa6.98□□□□□ -1.29
CTSL-201ENST00000340342 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
CTSL-201ENST00000340342 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
CTSL-201ENST00000340342 FSIP2Q5CZC0 6907 aa6.96□□□□□ -1.3
CTSL-201ENST00000340342 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
CTSL-201ENST00000340342 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
CTSL-201ENST00000340342 H7BZZ5 65 aa6.93□□□□□ -1.3
CTSL-201ENST00000340342 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
CTSL-201ENST00000340342 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
CTSL-201ENST00000340342 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
CTSL-201ENST00000340342 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
CTSL-201ENST00000340342 KRTAP3-1Q9BYR8 98 aa6.88□□□□□ -1.31
CTSL-201ENST00000340342 MT2AP02795 61 aa6.84□□□□□ -1.32
CTSL-201ENST00000340342 TMEM258P61165 79 aa6.84□□□□□ -1.32
CTSL-201ENST00000340342 MT1FP04733 61 aa6.8□□□□□ -1.32
CTSL-201ENST00000340342 A8MUN3 132 aa6.79□□□□□ -1.32
CTSL-201ENST00000340342 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
CTSL-201ENST00000340342 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
CTSL-201ENST00000340342 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
CTSL-201ENST00000340342 S4R3F8 94 aa6.76□□□□□ -1.33
CTSL-201ENST00000340342 ACYP2P14621 99 aa6.75□□□□□ -1.33
CTSL-201ENST00000340342 LCA10Q71F78 164 aa6.75□□□□□ -1.33
CTSL-201ENST00000340342 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
CTSL-201ENST00000340342 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.34
CTSL-201ENST00000340342 USH2AO75445 5202 aa6.7□□□□□ -1.34
CTSL-201ENST00000340342 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
CTSL-201ENST00000340342 COA5Q86WW8 74 aa6.67□□□□□ -1.34
CTSL-201ENST00000340342 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
CTSL-201ENST00000340342 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
CTSL-201ENST00000340342 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
CTSL-201ENST00000340342 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
CTSL-201ENST00000340342 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
CTSL-201ENST00000340342 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
CTSL-201ENST00000340342 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
CTSL-201ENST00000340342 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
CTSL-201ENST00000340342 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
CTSL-201ENST00000340342 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
CTSL-201ENST00000340342 H0YAA0 97 aa6.42□□□□□ -1.38
CTSL-201ENST00000340342 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
CTSL-201ENST00000340342 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
CTSL-201ENST00000340342 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
CTSL-201ENST00000340342 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
CTSL-201ENST00000340342 V9GYY9 64 aa6.35□□□□□ -1.39
CTSL-201ENST00000340342 Q1T7F1 81 aa6.34□□□□□ -1.39
CTSL-201ENST00000340342 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
CTSL-201ENST00000340342 SEC61GP60059 68 aa6.33□□□□□ -1.4
CTSL-201ENST00000340342 P0C880 135 aa6.32□□□□□ -1.4
CTSL-201ENST00000340342 A0A1B0GU69 56 aa6.31□□□□□ -1.4
CTSL-201ENST00000340342 MT1BP07438 61 aa6.3□□□□□ -1.4
CTSL-201ENST00000340342 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
CTSL-201ENST00000340342 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
CTSL-201ENST00000340342 Q5VV11 94 aa6.29□□□□□ -1.4
CTSL-201ENST00000340342 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
CTSL-201ENST00000340342 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
CTSL-201ENST00000340342 KRTAP4-11Q9BYQ6 195 aa6.25□□□□□ -1.41
CTSL-201ENST00000340342 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
CTSL-201ENST00000340342 PSPHP1O15172 72 aa6.22□□□□□ -1.41
CTSL-201ENST00000340342 R4GN34 69 aa6.2□□□□□ -1.42
CTSL-201ENST00000340342 M0QZ58 72 aa6.18□□□□□ -1.42
CTSL-201ENST00000340342 A0A1B0GU33 70 aa6.17□□□□□ -1.42
CTSL-201ENST00000340342 A6NN06 94 aa6.16□□□□□ -1.42
CTSL-201ENST00000340342 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
CTSL-201ENST00000340342 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
CTSL-201ENST00000340342 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
CTSL-201ENST00000340342 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
CTSL-201ENST00000340342 UQCR11O14957 56 aa6.09□□□□□ -1.43
CTSL-201ENST00000340342 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
CTSL-201ENST00000340342 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
CTSL-201ENST00000340342 A6NED7 52 aa6.05□□□□□ -1.44
CTSL-201ENST00000340342 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
CTSL-201ENST00000340342 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
CTSL-201ENST00000340342 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
CTSL-201ENST00000340342 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
CTSL-201ENST00000340342 MIR22HGQ0VDD5 57 aa6□□□□□ -1.45
CTSL-201ENST00000340342 MT1XP80297 61 aa5.98□□□□□ -1.45
CTSL-201ENST00000340342 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
CTSL-201ENST00000340342 A0A0D9SG42 100 aa5.94□□□□□ -1.46
CTSL-201ENST00000340342 A8MU10 97 aa5.94□□□□□ -1.46
CTSL-201ENST00000340342 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
CTSL-201ENST00000340342 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
CTSL-201ENST00000340342 KMT2DO14686 5537 aa5.86□□□□□ -1.47
CTSL-201ENST00000340342 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
CTSL-201ENST00000340342 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
CTSL-201ENST00000340342 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
CTSL-201ENST00000340342 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
CTSL-201ENST00000340342 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
CTSL-201ENST00000340342 K7ERS5 55 aa5.78□□□□□ -1.48
CTSL-201ENST00000340342 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
CTSL-201ENST00000340342 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
CTSL-201ENST00000340342 NEBP20929 6669 aa5.72□□□□□ -1.49
CTSL-201ENST00000340342 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
CTSL-201ENST00000340342 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
CTSL-201ENST00000340342 KRTAP10-12P60413 245 aa5.65□□□□□ -1.51
CTSL-201ENST00000340342 PRO0628Q9UI54 55 aa5.65□□□□□ -1.51
CTSL-201ENST00000340342 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms