RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 LCE4AQ5TA78 99 aa1.53□□□□□ -2.16
SOCS4-201ENST00000339298 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
SOCS4-201ENST00000339298 ANK3Q12955 4377 aaKnown RBP1.53□□□□□ -2.16
SOCS4-201ENST00000339298 TENM2Q9NT68 2774 aa1.52□□□□□ -2.17
SOCS4-201ENST00000339298 FBN2P35556 2912 aa1.52□□□□□ -2.17
SOCS4-201ENST00000339298 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
SOCS4-201ENST00000339298 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.52□□□□□ -2.17
SOCS4-201ENST00000339298 LCE3CQ5T5A8 94 aa1.51□□□□□ -2.17
SOCS4-201ENST00000339298 NBEAQ8NFP9 2946 aa1.51□□□□□ -2.17
SOCS4-201ENST00000339298 OTOGQ6ZRI0 2925 aa1.51□□□□□ -2.17
SOCS4-201ENST00000339298 PRKDCP78527 4128 aaKnown RBP1.51□□□□□ -2.17
SOCS4-201ENST00000339298 HERC2O95714 4834 aa1.51□□□□□ -2.17
SOCS4-201ENST00000339298 KRTAP4-8Q9BYQ9 185 aa1.51□□□□□ -2.17
SOCS4-201ENST00000339298 KALRNO60229 2985 aa1.5□□□□□ -2.17
SOCS4-201ENST00000339298 SRRM2Q9UQ35 2752 aaKnown RBP1.5□□□□□ -2.17
SOCS4-201ENST00000339298 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
SOCS4-201ENST00000339298 Q5VSD8 79 aa1.49□□□□□ -2.17
SOCS4-201ENST00000339298 SMR3BP02814 79 aaPredicted RBP1.49□□□□□ -2.17
SOCS4-201ENST00000339298 KRTAP10-9P60411 292 aa1.49□□□□□ -2.17
SOCS4-201ENST00000339298 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
SOCS4-201ENST00000339298 KRTAP9-8Q9BYQ0 159 aa1.47□□□□□ -2.17
SOCS4-201ENST00000339298 KRTAP9-2Q9BYQ4 174 aa1.47□□□□□ -2.17
SOCS4-201ENST00000339298 DCHS2Q6V1P9 2916 aa1.46□□□□□ -2.18
SOCS4-201ENST00000339298 ZANQ9Y493 2812 aa1.46□□□□□ -2.18
SOCS4-201ENST00000339298 CRYBG3Q68DQ2 2970 aa1.46□□□□□ -2.18
SOCS4-201ENST00000339298 NBEAL2Q6ZNJ1 2754 aa1.46□□□□□ -2.18
SOCS4-201ENST00000339298 FRAS1Q86XX4 4008 aa1.46□□□□□ -2.18
SOCS4-201ENST00000339298 A0A0C4DFX4 3053 aa1.45□□□□□ -2.18
SOCS4-201ENST00000339298 NF1P21359 2839 aa1.45□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP5-3Q6L8H2 238 aa1.45□□□□□ -2.18
SOCS4-201ENST00000339298 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 VPS13DQ5THJ4 4388 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 TNXBP22105 4242 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP9-6A0A140TA67 174 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP9-7A8MTY7 169 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP13-1Q8IUC0 172 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 HSPG2P98160 4391 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP10-11P60412 298 aa1.44□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP13-3Q3SY46 172 aa1.43□□□□□ -2.18
SOCS4-201ENST00000339298 FAT2Q9NYQ8 4349 aa1.42□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP9-9Q9BYP9 154 aa1.41□□□□□ -2.18
SOCS4-201ENST00000339298 KRTAP9-4Q9BYQ2 154 aa1.41□□□□□ -2.18
SOCS4-201ENST00000339298 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.18
SOCS4-201ENST00000339298 TGP01266 2768 aa1.4□□□□□ -2.19
SOCS4-201ENST00000339298 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP1-4P0C5Y4 121 aa1.39□□□□□ -2.19
SOCS4-201ENST00000339298 HERC1Q15751 4861 aa1.39□□□□□ -2.19
SOCS4-201ENST00000339298 PDZD2O15018 2839 aa1.39□□□□□ -2.19
SOCS4-201ENST00000339298 SACSQ9NZJ4 4579 aa1.39□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP4-2Q9BYR5 136 aa1.38□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP1-5Q9BYS1 174 aa1.38□□□□□ -2.19
SOCS4-201ENST00000339298 DNAH17Q9UFH2 4485 aa1.38□□□□□ -2.19
SOCS4-201ENST00000339298 LCE3EQ5T5B0 92 aa1.37□□□□□ -2.19
SOCS4-201ENST00000339298 LRBAP50851 2863 aa1.37□□□□□ -2.19
SOCS4-201ENST00000339298 FLGP20930 4061 aaPredicted RBP1.37□□□□□ -2.19
SOCS4-201ENST00000339298 COL12A1Q99715 3063 aa1.37□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP10-5P60370 271 aa1.37□□□□□ -2.19
SOCS4-201ENST00000339298 LAMA1P25391 3075 aa1.36□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP10-3P60369 221 aa1.36□□□□□ -2.19
SOCS4-201ENST00000339298 PKD1P98161 4303 aa1.36□□□□□ -2.19
SOCS4-201ENST00000339298 MYCBP2O75592 4640 aa1.36□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP4-8A0A0G2JLE6 195 aa1.36□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP10-12P60413 245 aa1.35□□□□□ -2.19
SOCS4-201ENST00000339298 SMR3AQ99954 134 aa1.35□□□□□ -2.19
SOCS4-201ENST00000339298 PKD1L1Q8TDX9 2849 aa1.35□□□□□ -2.19
SOCS4-201ENST00000339298 KRTAP19-1Q8IUB9 90 aa1.35□□□□□ -2.19
SOCS4-201ENST00000339298 RNF213Q63HN8 5207 aa1.34□□□□□ -2.19
SOCS4-201ENST00000339298 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.19
SOCS4-201ENST00000339298 LRP1BQ9NZR2 4599 aa1.34□□□□□ -2.19
SOCS4-201ENST00000339298 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
SOCS4-201ENST00000339298 TACC2O95359 2948 aa1.33□□□□□ -2.2
SOCS4-201ENST00000339298 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
SOCS4-201ENST00000339298 A0A1B0GVY2 172 aa1.33□□□□□ -2.2
SOCS4-201ENST00000339298 KRTAP10-6P60371 365 aaPredicted RBP1.31□□□□□ -2.2
SOCS4-201ENST00000339298 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
SOCS4-201ENST00000339298 KRTAP4-7Q9BYR0 210 aa1.31□□□□□ -2.2
SOCS4-201ENST00000339298 LCE5AQ5TCM9 118 aa1.31□□□□□ -2.2
SOCS4-201ENST00000339298 LRP2P98164 4655 aa1.3□□□□□ -2.2
SOCS4-201ENST00000339298 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
SOCS4-201ENST00000339298 KRTAP10-1P60331 282 aa1.3□□□□□ -2.2
SOCS4-201ENST00000339298 DNAH9Q9NYC9 4486 aa1.29□□□□□ -2.2
SOCS4-201ENST00000339298 HRNRQ86YZ3 2850 aaPredicted RBP1.29□□□□□ -2.2
SOCS4-201ENST00000339298 KRTAP9-3Q9BYQ3 159 aa1.27□□□□□ -2.21
SOCS4-201ENST00000339298 KMT2DO14686 5537 aa1.27□□□□□ -2.21
SOCS4-201ENST00000339298 LCE1DQ5T752 114 aa1.27□□□□□ -2.21
SOCS4-201ENST00000339298 DNAH2Q9P225 4427 aa1.27□□□□□ -2.21
SOCS4-201ENST00000339298 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
SOCS4-201ENST00000339298 KRTAP4-9Q9BYQ8 210 aa1.26□□□□□ -2.21
SOCS4-201ENST00000339298 KRTAP4-5Q9BYR2 181 aa1.26□□□□□ -2.21
SOCS4-201ENST00000339298 LCE1FQ5T754 118 aa1.25□□□□□ -2.21
SOCS4-201ENST00000339298 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
SOCS4-201ENST00000339298 PLECQ15149 4684 aaKnown RBP1.25□□□□□ -2.21
SOCS4-201ENST00000339298 USH2AO75445 5202 aa1.25□□□□□ -2.21
SOCS4-201ENST00000339298 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.24□□□□□ -2.21
SOCS4-201ENST00000339298 KRTAP10-10P60014 251 aa1.23□□□□□ -2.21
SOCS4-201ENST00000339298 KRTAP2-2Q9BYT5 123 aa1.22□□□□□ -2.21
SOCS4-201ENST00000339298 LCE3AQ5TA76 89 aa1.22□□□□□ -2.21
SOCS4-201ENST00000339298 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
SOCS4-201ENST00000339298 DNAH10Q8IVF4 4471 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms