RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 EHMT2Q96KQ7 1210 aa6.39□□□□□ -1.39
SOCS4-201ENST00000339298 CHIC1Q5VXU3 224 aa6.26□□□□□ -1.41
SOCS4-201ENST00000339298 DCAF8L2P0C7V8 631 aa6.01□□□□□ -1.45
SOCS4-201ENST00000339298 AEBP2Q6ZN18 517 aaPredicted RBP5.92□□□□□ -1.46
SOCS4-201ENST00000339298 SLC24A1O60721 1099 aa5.77□□□□□ -1.49
SOCS4-201ENST00000339298 MYT1Q01538 1121 aa5.63□□□□□ -1.51
SOCS4-201ENST00000339298 PLPPR3Q6T4P5 718 aa5.57□□□□□ -1.52
SOCS4-201ENST00000339298 RANGAP1P46060 587 aaPredicted RBP5.51□□□□□ -1.53
SOCS4-201ENST00000339298 SLC4A1APQ9BWU0 796 aaKnown RBP5.51□□□□□ -1.53
SOCS4-201ENST00000339298 MYT1LQ9UL68 1186 aa5.49□□□□□ -1.53
SOCS4-201ENST00000339298 HAP1P54257 671 aaPredicted RBP5.48□□□□□ -1.53
SOCS4-201ENST00000339298 KCNA4P22459 653 aa5.45□□□□□ -1.54
SOCS4-201ENST00000339298 PHF23Q9BUL5 403 aaPredicted RBP5.42□□□□□ -1.54
SOCS4-201ENST00000339298 PELP1Q8IZL8 1130 aaKnown RBP5.41□□□□□ -1.54
SOCS4-201ENST00000339298 ATP1B4Q9UN42 357 aaPredicted RBP5.41□□□□□ -1.54
SOCS4-201ENST00000339298 RTN4Q9NQC3 1192 aaKnown RBP5.38□□□□□ -1.55
SOCS4-201ENST00000339298 TTBK1Q5TCY1 1321 aaPredicted RBP5.36□□□□□ -1.55
SOCS4-201ENST00000339298 ERICH6Q7L0X2 663 aa5.36□□□□□ -1.55
SOCS4-201ENST00000339298 AMER1Q5JTC6 1135 aaPredicted RBP5.31□□□□□ -1.56
SOCS4-201ENST00000339298 SENP3Q9H4L4 574 aaPredicted RBP5.26□□□□□ -1.57
SOCS4-201ENST00000339298 FKBP8Q14318 412 aa5.26□□□□□ -1.57
SOCS4-201ENST00000339298 PRKCSHP14314 528 aaPredicted RBP5.26□□□□□ -1.57
SOCS4-201ENST00000339298 DCAF8L1A6NGE4 600 aa5.25□□□□□ -1.57
SOCS4-201ENST00000339298 ADRA2BP18089 450 aa5.25□□□□□ -1.57
SOCS4-201ENST00000339298 CFAP44Q96MT7 982 aa5.23□□□□□ -1.57
SOCS4-201ENST00000339298 NCBP3Q53F19 620 aaKnown RBP5.23□□□□□ -1.57
SOCS4-201ENST00000339298 ARID3AQ99856 593 aa5.22□□□□□ -1.57
SOCS4-201ENST00000339298 TPRNQ4KMQ1 711 aa5.22□□□□□ -1.57
SOCS4-201ENST00000339298 KLHL34Q8N239 644 aa5.17□□□□□ -1.58
SOCS4-201ENST00000339298 NBR1Q14596 966 aa5.17□□□□□ -1.58
SOCS4-201ENST00000339298 CSRNP3Q8WYN3 585 aa5.16□□□□□ -1.58
SOCS4-201ENST00000339298 C14orf37Q86TY3 774 aa5.15□□□□□ -1.58
SOCS4-201ENST00000339298 TULP1O00294 542 aaPredicted RBP5.14□□□□□ -1.59
SOCS4-201ENST00000339298 POLR3GLQ9BT43 218 aa5.13□□□□□ -1.59
SOCS4-201ENST00000339298 BCANQ96GW7 911 aa5.1□□□□□ -1.59
SOCS4-201ENST00000339298 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.08□□□□□ -1.6
SOCS4-201ENST00000339298 SUPT5HO00267 1087 aaKnown RBP5.08□□□□□ -1.6
SOCS4-201ENST00000339298 PIAS4Q8N2W9 510 aaPredicted RBP5.07□□□□□ -1.6
SOCS4-201ENST00000339298 TRIM41Q8WV44 630 aa5.06□□□□□ -1.6
SOCS4-201ENST00000339298 PODXL2Q9NZ53 605 aa5.04□□□□□ -1.6
SOCS4-201ENST00000339298 EIF5BO60841 1220 aaKnown RBP5.02□□□□□ -1.61
SOCS4-201ENST00000339298 PPP4R3CPQ6ZMV5 832 aa5.02□□□□□ -1.61
SOCS4-201ENST00000339298 PAXIP1Q6ZW49 1069 aaPredicted RBP5.02□□□□□ -1.61
SOCS4-201ENST00000339298 HOMEZQ8IX15 550 aa4.95□□□□□ -1.62
SOCS4-201ENST00000339298 CIZ1Q9ULV3 898 aaPredicted RBP4.95□□□□□ -1.62
SOCS4-201ENST00000339298 TAOK2Q9UL54 1235 aa4.92□□□□□ -1.62
SOCS4-201ENST00000339298 FAM9AQ8IZU1 332 aaPredicted RBP4.91□□□□□ -1.62
SOCS4-201ENST00000339298 DAXXQ9UER7 740 aaPredicted RBP4.91□□□□□ -1.62
SOCS4-201ENST00000339298 PLCD3Q8N3E9 789 aa4.89□□□□□ -1.63
SOCS4-201ENST00000339298 SCAF1Q9H7N4 1312 aaKnown RBP4.88□□□□□ -1.63
SOCS4-201ENST00000339298 PPP6R1Q9UPN7 881 aa4.86□□□□□ -1.63
SOCS4-201ENST00000339298 FOXD4L1Q9NU39 408 aa4.86□□□□□ -1.63
SOCS4-201ENST00000339298 YTHDC1Q96MU7 727 aaKnown RBP4.85□□□□□ -1.63
SOCS4-201ENST00000339298 GTF3C3Q9Y5Q9 886 aa4.85□□□□□ -1.63
SOCS4-201ENST00000339298 NPM2Q86SE8 214 aaKnown RBP4.85□□□□□ -1.63
SOCS4-201ENST00000339298 PLCB2Q00722 1185 aa4.84□□□□□ -1.64
SOCS4-201ENST00000339298 NPM3O75607 178 aaKnown RBP4.83□□□□□ -1.64
SOCS4-201ENST00000339298 PLEKHG5O94827 1062 aa4.83□□□□□ -1.64
SOCS4-201ENST00000339298 CHGAP10645 457 aaKnown RBP4.82□□□□□ -1.64
SOCS4-201ENST00000339298 TIMELESSQ9UNS1 1208 aa4.82□□□□□ -1.64
SOCS4-201ENST00000339298 ECM2O94769 699 aaPredicted RBP4.81□□□□□ -1.64
SOCS4-201ENST00000339298 PPP1R1BQ9UD71 204 aaPredicted RBP4.8□□□□□ -1.64
SOCS4-201ENST00000339298 CENPBP07199 599 aaPredicted RBP4.8□□□□□ -1.64
SOCS4-201ENST00000339298 GLIPR1L2Q4G1C9 344 aa4.79□□□□□ -1.64
SOCS4-201ENST00000339298 WDR70Q9NW82 654 aa4.79□□□□□ -1.64
SOCS4-201ENST00000339298 NEUROD2Q15784 382 aa4.78□□□□□ -1.64
SOCS4-201ENST00000339298 AEBP1Q8IUX7 1158 aa4.78□□□□□ -1.64
SOCS4-201ENST00000339298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.78□□□□□ -1.64
SOCS4-201ENST00000339298 CCER1Q8TC90 406 aaPredicted RBP4.78□□□□□ -1.64
SOCS4-201ENST00000339298 USP35Q9P2H5 1018 aa4.77□□□□□ -1.65
SOCS4-201ENST00000339298 ZBTB7CA1YPR0 619 aa4.77□□□□□ -1.65
SOCS4-201ENST00000339298 CDK11BP21127 795 aaKnown RBP4.76□□□□□ -1.65
SOCS4-201ENST00000339298 CDK11AQ9UQ88 783 aaPredicted RBP4.76□□□□□ -1.65
SOCS4-201ENST00000339298 A0A0U1RQG5 324 aaPredicted RBP4.76□□□□□ -1.65
SOCS4-201ENST00000339298 NEFLP07196 543 aa4.76□□□□□ -1.65
SOCS4-201ENST00000339298 FBXO3Q9UK99 471 aa4.74□□□□□ -1.65
SOCS4-201ENST00000339298 KRI1Q8N9T8 703 aaKnown RBP4.74□□□□□ -1.65
SOCS4-201ENST00000339298 SPRYD3Q8NCJ5 442 aa4.73□□□□□ -1.65
SOCS4-201ENST00000339298 RTL5Q5HYW3 569 aaPredicted RBP4.73□□□□□ -1.65
SOCS4-201ENST00000339298 MIER1Q8N108 512 aa4.73□□□□□ -1.65
SOCS4-201ENST00000339298 TRHP20396 242 aaPredicted RBP4.71□□□□□ -1.66
SOCS4-201ENST00000339298 FOXD1Q16676 465 aa4.71□□□□□ -1.66
SOCS4-201ENST00000339298 BCL11AQ9H165 835 aa4.71□□□□□ -1.66
SOCS4-201ENST00000339298 ARXQ96QS3 562 aa4.7□□□□□ -1.66
SOCS4-201ENST00000339298 FBLN2P98095 1184 aa4.69□□□□□ -1.66
SOCS4-201ENST00000339298 ARID4BQ4LE39 1312 aaPredicted RBP4.69□□□□□ -1.66
SOCS4-201ENST00000339298 ZEB1P37275 1124 aaPredicted RBP4.68□□□□□ -1.66
SOCS4-201ENST00000339298 ZNF526Q8TF50 670 aaPredicted RBP4.68□□□□□ -1.66
SOCS4-201ENST00000339298 ZBTB22O15209 634 aa4.67□□□□□ -1.66
SOCS4-201ENST00000339298 RBM25P49756 843 aaKnown RBP4.66□□□□□ -1.66
SOCS4-201ENST00000339298 NISCHQ9Y2I1 1504 aa4.65□□□□□ -1.66
SOCS4-201ENST00000339298 PDIA4P13667 645 aaKnown RBP4.64□□□□□ -1.67
SOCS4-201ENST00000339298 CNKSR2Q8WXI2 1034 aa4.64□□□□□ -1.67
SOCS4-201ENST00000339298 TSHZ2Q9NRE2 1034 aa4.64□□□□□ -1.67
SOCS4-201ENST00000339298 CCDC9Q9Y3X0 531 aaKnown RBP4.63□□□□□ -1.67
SOCS4-201ENST00000339298 VSIG10Q8N0Z9 540 aa4.62□□□□□ -1.67
SOCS4-201ENST00000339298 ZNF326Q5BKZ1 582 aaKnown RBP4.61□□□□□ -1.67
SOCS4-201ENST00000339298 ARID3CA6NKF2 412 aa4.61□□□□□ -1.67
SOCS4-201ENST00000339298 DCAF8Q5TAQ9 597 aa4.61□□□□□ -1.67
SOCS4-201ENST00000339298 SPDYE4A6NLX3 237 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms