RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
HOXC4-201ENST00000303406 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
HOXC4-201ENST00000303406 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
HOXC4-201ENST00000303406 A0A1B0GU69 56 aa10.09□□□□□ -0.79
HOXC4-201ENST00000303406 A6NED7 52 aa10.08□□□□□ -0.8
HOXC4-201ENST00000303406 KRTAP4-8Q9BYQ9 185 aa10.07□□□□□ -0.8
HOXC4-201ENST00000303406 CDC42SE1Q9NRR8 79 aa10.02□□□□□ -0.81
HOXC4-201ENST00000303406 BIRC6Q9NR09 4857 aa9.98□□□□□ -0.81
HOXC4-201ENST00000303406 LCA10Q71F78 164 aa9.97□□□□□ -0.81
HOXC4-201ENST00000303406 HERC2O95714 4834 aa9.96□□□□□ -0.82
HOXC4-201ENST00000303406 SEC61GP60059 68 aa9.94□□□□□ -0.82
HOXC4-201ENST00000303406 ABCA13Q86UQ4 5058 aa9.89□□□□□ -0.83
HOXC4-201ENST00000303406 A8MU10 97 aa9.88□□□□□ -0.83
HOXC4-201ENST00000303406 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.88□□□□□ -0.83
HOXC4-201ENST00000303406 UQCR11O14957 56 aa9.87□□□□□ -0.83
HOXC4-201ENST00000303406 KRTAP9-2Q9BYQ4 174 aa9.87□□□□□ -0.83
HOXC4-201ENST00000303406 SPATA8Q6RVD6 105 aa9.84□□□□□ -0.83
HOXC4-201ENST00000303406 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
HOXC4-201ENST00000303406 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
HOXC4-201ENST00000303406 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
HOXC4-201ENST00000303406 S4R3F8 94 aa9.82□□□□□ -0.84
HOXC4-201ENST00000303406 LRP2P98164 4655 aa9.8□□□□□ -0.84
HOXC4-201ENST00000303406 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
HOXC4-201ENST00000303406 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
HOXC4-201ENST00000303406 LPAP08519 4548 aa9.74□□□□□ -0.85
HOXC4-201ENST00000303406 PMAIP1Q13794 54 aa9.69□□□□□ -0.86
HOXC4-201ENST00000303406 A0A1B0GU33 70 aa9.67□□□□□ -0.86
HOXC4-201ENST00000303406 MUC17Q685J3 4493 aa9.67□□□□□ -0.86
HOXC4-201ENST00000303406 A6NN06 94 aa9.63□□□□□ -0.87
HOXC4-201ENST00000303406 H0YAA0 97 aa9.57□□□□□ -0.88
HOXC4-201ENST00000303406 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
HOXC4-201ENST00000303406 LCE3BQ5TA77 95 aa9.56□□□□□ -0.88
HOXC4-201ENST00000303406 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
HOXC4-201ENST00000303406 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.88
HOXC4-201ENST00000303406 KRTAP4-12Q9BQ66 201 aa9.46□□□□□ -0.9
HOXC4-201ENST00000303406 KTN1-AS1Q86SY8 53 aa9.45□□□□□ -0.9
HOXC4-201ENST00000303406 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
HOXC4-201ENST00000303406 PCLOQ9Y6V0 5065 aa9.4□□□□□ -0.9
HOXC4-201ENST00000303406 KRTAP19-2Q3LHN2 52 aa9.4□□□□□ -0.91
HOXC4-201ENST00000303406 P0C880 135 aa9.39□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP9-9Q9BYP9 154 aa9.37□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP9-4Q9BYQ2 154 aa9.37□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP13-4Q3LI77 160 aa9.32□□□□□ -0.92
HOXC4-201ENST00000303406 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
HOXC4-201ENST00000303406 HERC1Q15751 4861 aa9.32□□□□□ -0.92
HOXC4-201ENST00000303406 K7ERS5 55 aa9.29□□□□□ -0.92
HOXC4-201ENST00000303406 M0QZ58 72 aa9.26□□□□□ -0.93
HOXC4-201ENST00000303406 A0A0D9SG42 100 aa9.15□□□□□ -0.95
HOXC4-201ENST00000303406 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
HOXC4-201ENST00000303406 FLGP20930 4061 aaPredicted RBP9.11□□□□□ -0.95
HOXC4-201ENST00000303406 KRTAP4-7Q9BYR0 210 aa9.06□□□□□ -0.96
HOXC4-201ENST00000303406 R4GN34 69 aa9.04□□□□□ -0.96
HOXC4-201ENST00000303406 KRTAP12-1P59990 96 aa9.02□□□□□ -0.97
HOXC4-201ENST00000303406 PRAC1Q96KF2 57 aa9□□□□□ -0.97
HOXC4-201ENST00000303406 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
HOXC4-201ENST00000303406 ROMO1P60602 79 aa8.97□□□□□ -0.97
HOXC4-201ENST00000303406 LCE1DQ5T752 114 aa8.95□□□□□ -0.98
HOXC4-201ENST00000303406 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
HOXC4-201ENST00000303406 MUC2Q02817 5179 aa8.92□□□□□ -0.98
HOXC4-201ENST00000303406 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
HOXC4-201ENST00000303406 LINC01554Q52M75 96 aa8.83□□□□□ -1
HOXC4-201ENST00000303406 RNF213Q63HN8 5207 aa8.81□□□□□ -1
HOXC4-201ENST00000303406 MT1HP80294 61 aa8.79□□□□□ -1
HOXC4-201ENST00000303406 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
HOXC4-201ENST00000303406 KRTAP4-9Q9BYQ8 210 aa8.75□□□□□ -1.01
HOXC4-201ENST00000303406 KRTAP23-1A1A580 65 aa8.73□□□□□ -1.01
HOXC4-201ENST00000303406 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
HOXC4-201ENST00000303406 M0R2T5 61 aa8.69□□□□□ -1.02
HOXC4-201ENST00000303406 KRTAP4-2Q9BYR5 136 aa8.66□□□□□ -1.02
HOXC4-201ENST00000303406 A0A0A0MQY5 61 aa8.62□□□□□ -1.03
HOXC4-201ENST00000303406 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
HOXC4-201ENST00000303406 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
HOXC4-201ENST00000303406 MT2AP02795 61 aa8.54□□□□□ -1.04
HOXC4-201ENST00000303406 KRTAP9-8Q9BYQ0 159 aa8.53□□□□□ -1.04
HOXC4-201ENST00000303406 C10orf95Q9H7T3 257 aa8.51□□□□□ -1.05
HOXC4-201ENST00000303406 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
HOXC4-201ENST00000303406 MT1FP04733 61 aa8.49□□□□□ -1.05
HOXC4-201ENST00000303406 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
HOXC4-201ENST00000303406 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
HOXC4-201ENST00000303406 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
HOXC4-201ENST00000303406 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
HOXC4-201ENST00000303406 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
HOXC4-201ENST00000303406 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.1
HOXC4-201ENST00000303406 TNP1P09430 55 aa8.2□□□□□ -1.1
HOXC4-201ENST00000303406 MT1BP07438 61 aa8.14□□□□□ -1.11
HOXC4-201ENST00000303406 LCE4AQ5TA78 99 aa8.06□□□□□ -1.12
HOXC4-201ENST00000303406 KRTAP5-3Q6L8H2 238 aa8.06□□□□□ -1.12
HOXC4-201ENST00000303406 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
HOXC4-201ENST00000303406 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
HOXC4-201ENST00000303406 MT1XP80297 61 aa7.95□□□□□ -1.14
HOXC4-201ENST00000303406 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
HOXC4-201ENST00000303406 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
HOXC4-201ENST00000303406 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
HOXC4-201ENST00000303406 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
HOXC4-201ENST00000303406 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
HOXC4-201ENST00000303406 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
HOXC4-201ENST00000303406 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
HOXC4-201ENST00000303406 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
HOXC4-201ENST00000303406 USH2AO75445 5202 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms