RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
HOXC4-201ENST00000303406 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
HOXC4-201ENST00000303406 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
HOXC4-201ENST00000303406 A0A1B0GU69 56 aa10.09□□□□□ -0.79
HOXC4-201ENST00000303406 A6NED7 52 aa10.08□□□□□ -0.8
HOXC4-201ENST00000303406 KRTAP4-8Q9BYQ9 185 aa10.07□□□□□ -0.8
HOXC4-201ENST00000303406 CDC42SE1Q9NRR8 79 aa10.02□□□□□ -0.81
HOXC4-201ENST00000303406 BIRC6Q9NR09 4857 aa9.98□□□□□ -0.81
HOXC4-201ENST00000303406 LCA10Q71F78 164 aa9.97□□□□□ -0.81
HOXC4-201ENST00000303406 HERC2O95714 4834 aa9.96□□□□□ -0.82
HOXC4-201ENST00000303406 SEC61GP60059 68 aa9.94□□□□□ -0.82
HOXC4-201ENST00000303406 ABCA13Q86UQ4 5058 aa9.89□□□□□ -0.83
HOXC4-201ENST00000303406 A8MU10 97 aa9.88□□□□□ -0.83
HOXC4-201ENST00000303406 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.88□□□□□ -0.83
HOXC4-201ENST00000303406 UQCR11O14957 56 aa9.87□□□□□ -0.83
HOXC4-201ENST00000303406 KRTAP9-2Q9BYQ4 174 aa9.87□□□□□ -0.83
HOXC4-201ENST00000303406 SPATA8Q6RVD6 105 aa9.84□□□□□ -0.83
HOXC4-201ENST00000303406 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
HOXC4-201ENST00000303406 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
HOXC4-201ENST00000303406 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
HOXC4-201ENST00000303406 S4R3F8 94 aa9.82□□□□□ -0.84
HOXC4-201ENST00000303406 LRP2P98164 4655 aa9.8□□□□□ -0.84
HOXC4-201ENST00000303406 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
HOXC4-201ENST00000303406 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
HOXC4-201ENST00000303406 LPAP08519 4548 aa9.74□□□□□ -0.85
HOXC4-201ENST00000303406 PMAIP1Q13794 54 aa9.69□□□□□ -0.86
HOXC4-201ENST00000303406 A0A1B0GU33 70 aa9.67□□□□□ -0.86
HOXC4-201ENST00000303406 MUC17Q685J3 4493 aa9.67□□□□□ -0.86
HOXC4-201ENST00000303406 A6NN06 94 aa9.63□□□□□ -0.87
HOXC4-201ENST00000303406 H0YAA0 97 aa9.57□□□□□ -0.88
HOXC4-201ENST00000303406 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
HOXC4-201ENST00000303406 LCE3BQ5TA77 95 aa9.56□□□□□ -0.88
HOXC4-201ENST00000303406 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
HOXC4-201ENST00000303406 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.88
HOXC4-201ENST00000303406 KRTAP4-12Q9BQ66 201 aa9.46□□□□□ -0.9
HOXC4-201ENST00000303406 KTN1-AS1Q86SY8 53 aa9.45□□□□□ -0.9
HOXC4-201ENST00000303406 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
HOXC4-201ENST00000303406 PCLOQ9Y6V0 5065 aa9.4□□□□□ -0.9
HOXC4-201ENST00000303406 KRTAP19-2Q3LHN2 52 aa9.4□□□□□ -0.91
HOXC4-201ENST00000303406 P0C880 135 aa9.39□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP9-9Q9BYP9 154 aa9.37□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP9-4Q9BYQ2 154 aa9.37□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
HOXC4-201ENST00000303406 KRTAP13-4Q3LI77 160 aa9.32□□□□□ -0.92
HOXC4-201ENST00000303406 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
HOXC4-201ENST00000303406 HERC1Q15751 4861 aa9.32□□□□□ -0.92
HOXC4-201ENST00000303406 K7ERS5 55 aa9.29□□□□□ -0.92
HOXC4-201ENST00000303406 M0QZ58 72 aa9.26□□□□□ -0.93
HOXC4-201ENST00000303406 A0A0D9SG42 100 aa9.15□□□□□ -0.95
HOXC4-201ENST00000303406 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
HOXC4-201ENST00000303406 FLGP20930 4061 aaPredicted RBP9.11□□□□□ -0.95
HOXC4-201ENST00000303406 KRTAP4-7Q9BYR0 210 aa9.06□□□□□ -0.96
HOXC4-201ENST00000303406 R4GN34 69 aa9.04□□□□□ -0.96
HOXC4-201ENST00000303406 KRTAP12-1P59990 96 aa9.02□□□□□ -0.97
HOXC4-201ENST00000303406 PRAC1Q96KF2 57 aa9□□□□□ -0.97
HOXC4-201ENST00000303406 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
HOXC4-201ENST00000303406 ROMO1P60602 79 aa8.97□□□□□ -0.97
HOXC4-201ENST00000303406 LCE1DQ5T752 114 aa8.95□□□□□ -0.98
HOXC4-201ENST00000303406 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
HOXC4-201ENST00000303406 MUC2Q02817 5179 aa8.92□□□□□ -0.98
HOXC4-201ENST00000303406 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
HOXC4-201ENST00000303406 LINC01554Q52M75 96 aa8.83□□□□□ -1
HOXC4-201ENST00000303406 RNF213Q63HN8 5207 aa8.81□□□□□ -1
HOXC4-201ENST00000303406 MT1HP80294 61 aa8.79□□□□□ -1
HOXC4-201ENST00000303406 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
HOXC4-201ENST00000303406 KRTAP4-9Q9BYQ8 210 aa8.75□□□□□ -1.01
HOXC4-201ENST00000303406 KRTAP23-1A1A580 65 aa8.73□□□□□ -1.01
HOXC4-201ENST00000303406 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
HOXC4-201ENST00000303406 M0R2T5 61 aa8.69□□□□□ -1.02
HOXC4-201ENST00000303406 KRTAP4-2Q9BYR5 136 aa8.66□□□□□ -1.02
HOXC4-201ENST00000303406 A0A0A0MQY5 61 aa8.62□□□□□ -1.03
HOXC4-201ENST00000303406 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
HOXC4-201ENST00000303406 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
HOXC4-201ENST00000303406 MT2AP02795 61 aa8.54□□□□□ -1.04
HOXC4-201ENST00000303406 KRTAP9-8Q9BYQ0 159 aa8.53□□□□□ -1.04
HOXC4-201ENST00000303406 C10orf95Q9H7T3 257 aa8.51□□□□□ -1.05
HOXC4-201ENST00000303406 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
HOXC4-201ENST00000303406 MT1FP04733 61 aa8.49□□□□□ -1.05
HOXC4-201ENST00000303406 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
HOXC4-201ENST00000303406 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
HOXC4-201ENST00000303406 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
HOXC4-201ENST00000303406 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
HOXC4-201ENST00000303406 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
HOXC4-201ENST00000303406 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.1
HOXC4-201ENST00000303406 TNP1P09430 55 aa8.2□□□□□ -1.1
HOXC4-201ENST00000303406 MT1BP07438 61 aa8.14□□□□□ -1.11
HOXC4-201ENST00000303406 LCE4AQ5TA78 99 aa8.06□□□□□ -1.12
HOXC4-201ENST00000303406 KRTAP5-3Q6L8H2 238 aa8.06□□□□□ -1.12
HOXC4-201ENST00000303406 KRTAP19-4Q3LI73 84 aa8□□□□□ -1.13
HOXC4-201ENST00000303406 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
HOXC4-201ENST00000303406 MT1XP80297 61 aa7.95□□□□□ -1.14
HOXC4-201ENST00000303406 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
HOXC4-201ENST00000303406 KRTAP15-1Q3LI76 137 aa7.88□□□□□ -1.15
HOXC4-201ENST00000303406 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
HOXC4-201ENST00000303406 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
HOXC4-201ENST00000303406 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
HOXC4-201ENST00000303406 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
HOXC4-201ENST00000303406 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
HOXC4-201ENST00000303406 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
HOXC4-201ENST00000303406 USH2AO75445 5202 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms