RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
CCDC140-201ENST00000295226 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
CCDC140-201ENST00000295226 SPINK7P58062 85 aa7.84□□□□□ -1.15
CCDC140-201ENST00000295226 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
CCDC140-201ENST00000295226 C7orf65Q6ZTY9 151 aa7.83□□□□□ -1.16
CCDC140-201ENST00000295226 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
CCDC140-201ENST00000295226 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
CCDC140-201ENST00000295226 PSPHP1O15172 72 aa7.78□□□□□ -1.16
CCDC140-201ENST00000295226 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
CCDC140-201ENST00000295226 A8MUN3 132 aa7.76□□□□□ -1.17
CCDC140-201ENST00000295226 PRR15LQ9BU68 103 aa7.74□□□□□ -1.17
CCDC140-201ENST00000295226 Q5VV11 94 aa7.73□□□□□ -1.17
CCDC140-201ENST00000295226 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
CCDC140-201ENST00000295226 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
CCDC140-201ENST00000295226 FAT4Q6V0I7 4981 aa7.65□□□□□ -1.18
CCDC140-201ENST00000295226 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
CCDC140-201ENST00000295226 RBM12B-AS1Q9P1G2 102 aa7.63□□□□□ -1.19
CCDC140-201ENST00000295226 SPTSSBQ8NFR3 76 aa7.61□□□□□ -1.19
CCDC140-201ENST00000295226 A6NED7 52 aa7.59□□□□□ -1.19
CCDC140-201ENST00000295226 A0A1B0GU69 56 aa7.56□□□□□ -1.2
CCDC140-201ENST00000295226 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
CCDC140-201ENST00000295226 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
CCDC140-201ENST00000295226 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
CCDC140-201ENST00000295226 MT1HP80294 61 aa7.5□□□□□ -1.21
CCDC140-201ENST00000295226 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
CCDC140-201ENST00000295226 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
CCDC140-201ENST00000295226 SEC61GP60059 68 aa7.47□□□□□ -1.21
CCDC140-201ENST00000295226 LCA10Q71F78 164 aa7.47□□□□□ -1.21
CCDC140-201ENST00000295226 M0R2T5 61 aa7.41□□□□□ -1.22
CCDC140-201ENST00000295226 UQCR11O14957 56 aa7.41□□□□□ -1.22
CCDC140-201ENST00000295226 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
CCDC140-201ENST00000295226 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
CCDC140-201ENST00000295226 A8MU10 97 aa7.36□□□□□ -1.23
CCDC140-201ENST00000295226 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
CCDC140-201ENST00000295226 S4R3F8 94 aa7.35□□□□□ -1.23
CCDC140-201ENST00000295226 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
CCDC140-201ENST00000295226 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
CCDC140-201ENST00000295226 MIR22HGQ0VDD5 57 aa7.33□□□□□ -1.24
CCDC140-201ENST00000295226 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
CCDC140-201ENST00000295226 A6NN06 94 aa7.24□□□□□ -1.25
CCDC140-201ENST00000295226 A0A1B0GU33 70 aa7.22□□□□□ -1.25
CCDC140-201ENST00000295226 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
CCDC140-201ENST00000295226 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
CCDC140-201ENST00000295226 KTN1-AS1Q86SY8 53 aa7.16□□□□□ -1.26
CCDC140-201ENST00000295226 MT2AP02795 61 aa7.12□□□□□ -1.27
CCDC140-201ENST00000295226 H0YAA0 97 aa7.11□□□□□ -1.27
CCDC140-201ENST00000295226 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
CCDC140-201ENST00000295226 MT1FP04733 61 aa7.09□□□□□ -1.27
CCDC140-201ENST00000295226 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
CCDC140-201ENST00000295226 KRTAP4-12Q9BQ66 201 aa7.05□□□□□ -1.28
CCDC140-201ENST00000295226 K7ERS5 55 aa7.02□□□□□ -1.29
CCDC140-201ENST00000295226 ADM2Q7Z4H4 148 aa7.01□□□□□ -1.29
CCDC140-201ENST00000295226 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
CCDC140-201ENST00000295226 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
CCDC140-201ENST00000295226 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
CCDC140-201ENST00000295226 P0C880 135 aa6.94□□□□□ -1.3
CCDC140-201ENST00000295226 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CCDC140-201ENST00000295226 M0QZ58 72 aa6.89□□□□□ -1.31
CCDC140-201ENST00000295226 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
CCDC140-201ENST00000295226 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
CCDC140-201ENST00000295226 A0A0D9SG42 100 aa6.79□□□□□ -1.32
CCDC140-201ENST00000295226 CRIPTQ9P021 101 aa6.77□□□□□ -1.32
CCDC140-201ENST00000295226 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
CCDC140-201ENST00000295226 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
CCDC140-201ENST00000295226 R4GN34 69 aa6.75□□□□□ -1.33
CCDC140-201ENST00000295226 USH2AO75445 5202 aa6.74□□□□□ -1.33
CCDC140-201ENST00000295226 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
CCDC140-201ENST00000295226 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
CCDC140-201ENST00000295226 ROMO1P60602 79 aa6.72□□□□□ -1.33
CCDC140-201ENST00000295226 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
CCDC140-201ENST00000295226 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
CCDC140-201ENST00000295226 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
CCDC140-201ENST00000295226 KRTAP12-2P59991 146 aa6.65□□□□□ -1.35
CCDC140-201ENST00000295226 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.35
CCDC140-201ENST00000295226 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
CCDC140-201ENST00000295226 MT1BP07438 61 aa6.63□□□□□ -1.35
CCDC140-201ENST00000295226 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CCDC140-201ENST00000295226 SSPOA2VEC9 5147 aa6.57□□□□□ -1.36
CCDC140-201ENST00000295226 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
CCDC140-201ENST00000295226 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
CCDC140-201ENST00000295226 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
CCDC140-201ENST00000295226 KRTAP4-2Q9BYR5 136 aa6.44□□□□□ -1.38
CCDC140-201ENST00000295226 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
CCDC140-201ENST00000295226 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
CCDC140-201ENST00000295226 H3BS24 57 aa6.35□□□□□ -1.39
CCDC140-201ENST00000295226 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
CCDC140-201ENST00000295226 MT1XP80297 61 aa6.33□□□□□ -1.4
CCDC140-201ENST00000295226 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
CCDC140-201ENST00000295226 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
CCDC140-201ENST00000295226 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
CCDC140-201ENST00000295226 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
CCDC140-201ENST00000295226 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
CCDC140-201ENST00000295226 TNP1P09430 55 aa6.1□□□□□ -1.43
CCDC140-201ENST00000295226 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
CCDC140-201ENST00000295226 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
CCDC140-201ENST00000295226 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
CCDC140-201ENST00000295226 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
CCDC140-201ENST00000295226 KMT2DO14686 5537 aa6.02□□□□□ -1.45
CCDC140-201ENST00000295226 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
CCDC140-201ENST00000295226 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms