RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SPTSSBQ8NFR3 76 aa7.2□□□□□ -1.26
SDF2-201ENST00000247020 HERC1Q15751 4861 aa7.19□□□□□ -1.26
SDF2-201ENST00000247020 HMCN2Q8NDA2 5059 aa7.18□□□□□ -1.26
SDF2-201ENST00000247020 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
SDF2-201ENST00000247020 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
SDF2-201ENST00000247020 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
SDF2-201ENST00000247020 S4R3F8 94 aa7.11□□□□□ -1.27
SDF2-201ENST00000247020 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
SDF2-201ENST00000247020 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
SDF2-201ENST00000247020 LCA10Q71F78 164 aa7.06□□□□□ -1.28
SDF2-201ENST00000247020 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
SDF2-201ENST00000247020 PSPHP1O15172 72 aa7.01□□□□□ -1.29
SDF2-201ENST00000247020 A0A1B0GU69 56 aa7□□□□□ -1.29
SDF2-201ENST00000247020 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
SDF2-201ENST00000247020 Q5VV11 94 aa6.99□□□□□ -1.29
SDF2-201ENST00000247020 SEC61GP60059 68 aa6.98□□□□□ -1.29
SDF2-201ENST00000247020 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
SDF2-201ENST00000247020 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
SDF2-201ENST00000247020 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
SDF2-201ENST00000247020 H0YAA0 97 aa6.86□□□□□ -1.31
SDF2-201ENST00000247020 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
SDF2-201ENST00000247020 A6NED7 52 aa6.83□□□□□ -1.32
SDF2-201ENST00000247020 UQCR11O14957 56 aa6.82□□□□□ -1.32
SDF2-201ENST00000247020 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
SDF2-201ENST00000247020 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
SDF2-201ENST00000247020 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
SDF2-201ENST00000247020 MUC2Q02817 5179 aa6.8□□□□□ -1.32
SDF2-201ENST00000247020 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
SDF2-201ENST00000247020 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
SDF2-201ENST00000247020 A0A1B0GU33 70 aa6.78□□□□□ -1.32
SDF2-201ENST00000247020 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
SDF2-201ENST00000247020 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
SDF2-201ENST00000247020 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
SDF2-201ENST00000247020 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
SDF2-201ENST00000247020 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
SDF2-201ENST00000247020 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
SDF2-201ENST00000247020 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
SDF2-201ENST00000247020 P0C880 135 aa6.7□□□□□ -1.34
SDF2-201ENST00000247020 MT1HP80294 61 aa6.68□□□□□ -1.34
SDF2-201ENST00000247020 M0QZ58 72 aa6.63□□□□□ -1.35
SDF2-201ENST00000247020 A8MU10 97 aa6.61□□□□□ -1.35
SDF2-201ENST00000247020 M0R2T5 61 aa6.61□□□□□ -1.35
SDF2-201ENST00000247020 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
SDF2-201ENST00000247020 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
SDF2-201ENST00000247020 FAT4Q6V0I7 4981 aa6.57□□□□□ -1.36
SDF2-201ENST00000247020 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
SDF2-201ENST00000247020 R4GN34 69 aa6.55□□□□□ -1.36
SDF2-201ENST00000247020 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
SDF2-201ENST00000247020 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
SDF2-201ENST00000247020 K7ERS5 55 aa6.46□□□□□ -1.38
SDF2-201ENST00000247020 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
SDF2-201ENST00000247020 KRTAP9-9Q9BYP9 154 aa6.44□□□□□ -1.38
SDF2-201ENST00000247020 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
SDF2-201ENST00000247020 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
SDF2-201ENST00000247020 A0A0D9SG42 100 aa6.44□□□□□ -1.38
SDF2-201ENST00000247020 A6NN06 94 aa6.42□□□□□ -1.38
SDF2-201ENST00000247020 MT2AP02795 61 aa6.42□□□□□ -1.38
SDF2-201ENST00000247020 MT1FP04733 61 aa6.37□□□□□ -1.39
SDF2-201ENST00000247020 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
SDF2-201ENST00000247020 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
SDF2-201ENST00000247020 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
SDF2-201ENST00000247020 LINC01554Q52M75 96 aa6.35□□□□□ -1.39
SDF2-201ENST00000247020 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
SDF2-201ENST00000247020 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
SDF2-201ENST00000247020 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
SDF2-201ENST00000247020 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
SDF2-201ENST00000247020 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
SDF2-201ENST00000247020 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
SDF2-201ENST00000247020 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
SDF2-201ENST00000247020 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
SDF2-201ENST00000247020 ROMO1P60602 79 aa6.16□□□□□ -1.42
SDF2-201ENST00000247020 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
SDF2-201ENST00000247020 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
SDF2-201ENST00000247020 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
SDF2-201ENST00000247020 MT1BP07438 61 aa6.06□□□□□ -1.44
SDF2-201ENST00000247020 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
SDF2-201ENST00000247020 KRTAP4-2Q9BYR5 136 aa6.03□□□□□ -1.44
SDF2-201ENST00000247020 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
SDF2-201ENST00000247020 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
SDF2-201ENST00000247020 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
SDF2-201ENST00000247020 MT1XP80297 61 aa5.87□□□□□ -1.47
SDF2-201ENST00000247020 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
SDF2-201ENST00000247020 TNP1P09430 55 aa5.86□□□□□ -1.47
SDF2-201ENST00000247020 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
SDF2-201ENST00000247020 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
SDF2-201ENST00000247020 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
SDF2-201ENST00000247020 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
SDF2-201ENST00000247020 USH2AO75445 5202 aa5.74□□□□□ -1.49
SDF2-201ENST00000247020 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
SDF2-201ENST00000247020 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
SDF2-201ENST00000247020 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
SDF2-201ENST00000247020 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
SDF2-201ENST00000247020 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
SDF2-201ENST00000247020 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
SDF2-201ENST00000247020 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
SDF2-201ENST00000247020 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
SDF2-201ENST00000247020 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
SDF2-201ENST00000247020 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
SDF2-201ENST00000247020 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
SDF2-201ENST00000247020 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms