RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 PSPHP1O15172 72 aa8.23□□□□□ -1.09
RAB38-201ENST00000243662 BRK1Q8WUW1 75 aa8.23□□□□□ -1.09
RAB38-201ENST00000243662 A8MUN3 132 aa8.21□□□□□ -1.09
RAB38-201ENST00000243662 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
RAB38-201ENST00000243662 Q5VV11 94 aa8.19□□□□□ -1.1
RAB38-201ENST00000243662 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
RAB38-201ENST00000243662 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
RAB38-201ENST00000243662 IGKV2D-30A0A075B6S6 120 aa8.14□□□□□ -1.11
RAB38-201ENST00000243662 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
RAB38-201ENST00000243662 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
RAB38-201ENST00000243662 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
RAB38-201ENST00000243662 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
RAB38-201ENST00000243662 LCE2CQ5TA81 110 aa8.05□□□□□ -1.12
RAB38-201ENST00000243662 A6NED7 52 aa8□□□□□ -1.13
RAB38-201ENST00000243662 CDC42SE1Q9NRR8 79 aa7.96□□□□□ -1.13
RAB38-201ENST00000243662 LCA10Q71F78 164 aa7.93□□□□□ -1.14
RAB38-201ENST00000243662 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
RAB38-201ENST00000243662 A0A1B0GU69 56 aa7.92□□□□□ -1.14
RAB38-201ENST00000243662 SPINK7P58062 85 aa7.91□□□□□ -1.14
RAB38-201ENST00000243662 MT1HP80294 61 aa7.9□□□□□ -1.14
RAB38-201ENST00000243662 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
RAB38-201ENST00000243662 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
RAB38-201ENST00000243662 A8MU10 97 aa7.84□□□□□ -1.15
RAB38-201ENST00000243662 PMAIP1Q13794 54 aa7.81□□□□□ -1.16
RAB38-201ENST00000243662 RBM12B-AS1Q9P1G2 102 aa7.81□□□□□ -1.16
RAB38-201ENST00000243662 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
RAB38-201ENST00000243662 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
RAB38-201ENST00000243662 SEC61GP60059 68 aa7.79□□□□□ -1.16
RAB38-201ENST00000243662 UQCR11O14957 56 aa7.78□□□□□ -1.16
RAB38-201ENST00000243662 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
RAB38-201ENST00000243662 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
RAB38-201ENST00000243662 A6NN06 94 aa7.72□□□□□ -1.17
RAB38-201ENST00000243662 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
RAB38-201ENST00000243662 M0R2T5 61 aa7.69□□□□□ -1.18
RAB38-201ENST00000243662 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
RAB38-201ENST00000243662 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
RAB38-201ENST00000243662 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
RAB38-201ENST00000243662 KTN1-AS1Q86SY8 53 aa7.62□□□□□ -1.19
RAB38-201ENST00000243662 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
RAB38-201ENST00000243662 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
RAB38-201ENST00000243662 A0A1B0GU33 70 aa7.55□□□□□ -1.2
RAB38-201ENST00000243662 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
RAB38-201ENST00000243662 S4R3F8 94 aa7.51□□□□□ -1.21
RAB38-201ENST00000243662 H0YAA0 97 aa7.48□□□□□ -1.21
RAB38-201ENST00000243662 MT2AP02795 61 aa7.45□□□□□ -1.22
RAB38-201ENST00000243662 MT1FP04733 61 aa7.39□□□□□ -1.23
RAB38-201ENST00000243662 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
RAB38-201ENST00000243662 K7ERS5 55 aa7.33□□□□□ -1.24
RAB38-201ENST00000243662 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
RAB38-201ENST00000243662 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
RAB38-201ENST00000243662 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
RAB38-201ENST00000243662 KRTAP4-12Q9BQ66 201 aa7.25□□□□□ -1.25
RAB38-201ENST00000243662 KRTAP9-9Q9BYP9 154 aa7.25□□□□□ -1.25
RAB38-201ENST00000243662 KRTAP9-4Q9BYQ2 154 aa7.25□□□□□ -1.25
RAB38-201ENST00000243662 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
RAB38-201ENST00000243662 P0C880 135 aa7.21□□□□□ -1.26
RAB38-201ENST00000243662 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
RAB38-201ENST00000243662 PRAC1Q96KF2 57 aa7.21□□□□□ -1.26
RAB38-201ENST00000243662 KRTAP13-4Q3LI77 160 aa7.19□□□□□ -1.26
RAB38-201ENST00000243662 M0QZ58 72 aa7.16□□□□□ -1.26
RAB38-201ENST00000243662 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
RAB38-201ENST00000243662 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
RAB38-201ENST00000243662 A0A0D9SG42 100 aa7.1□□□□□ -1.27
RAB38-201ENST00000243662 USH2AO75445 5202 aa7.09□□□□□ -1.27
RAB38-201ENST00000243662 ROMO1P60602 79 aa7.07□□□□□ -1.28
RAB38-201ENST00000243662 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
RAB38-201ENST00000243662 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
RAB38-201ENST00000243662 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
RAB38-201ENST00000243662 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
RAB38-201ENST00000243662 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
RAB38-201ENST00000243662 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
RAB38-201ENST00000243662 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
RAB38-201ENST00000243662 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
RAB38-201ENST00000243662 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
RAB38-201ENST00000243662 R4GN34 69 aa6.94□□□□□ -1.3
RAB38-201ENST00000243662 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
RAB38-201ENST00000243662 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
RAB38-201ENST00000243662 LCE1DQ5T752 114 aa6.9□□□□□ -1.31
RAB38-201ENST00000243662 MT1BP07438 61 aa6.89□□□□□ -1.31
RAB38-201ENST00000243662 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
RAB38-201ENST00000243662 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
RAB38-201ENST00000243662 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
RAB38-201ENST00000243662 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
RAB38-201ENST00000243662 KRTAP10-5P60370 271 aa6.65□□□□□ -1.35
RAB38-201ENST00000243662 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
RAB38-201ENST00000243662 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
RAB38-201ENST00000243662 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
RAB38-201ENST00000243662 MT1XP80297 61 aa6.53□□□□□ -1.36
RAB38-201ENST00000243662 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
RAB38-201ENST00000243662 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
RAB38-201ENST00000243662 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.38
RAB38-201ENST00000243662 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
RAB38-201ENST00000243662 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
RAB38-201ENST00000243662 KRTAP4-11Q9BYQ6 195 aa6.44□□□□□ -1.38
RAB38-201ENST00000243662 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
RAB38-201ENST00000243662 TNP1P09430 55 aa6.33□□□□□ -1.4
RAB38-201ENST00000243662 KRTAP6-3Q3LI67 103 aa6.31□□□□□ -1.4
RAB38-201ENST00000243662 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
RAB38-201ENST00000243662 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
RAB38-201ENST00000243662 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms