RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
APOA1-201ENST00000236850 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
APOA1-201ENST00000236850 MT1FP04733 61 aa7.43□□□□□ -1.22
APOA1-201ENST00000236850 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
APOA1-201ENST00000236850 CYSTM1Q9H1C7 97 aa7.39□□□□□ -1.23
APOA1-201ENST00000236850 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
APOA1-201ENST00000236850 A8MUN3 132 aa7.33□□□□□ -1.24
APOA1-201ENST00000236850 NDUFC1O43677 76 aa7.33□□□□□ -1.24
APOA1-201ENST00000236850 H7BZZ5 65 aa7.32□□□□□ -1.24
APOA1-201ENST00000236850 DMAC1Q96GE9 116 aa7.32□□□□□ -1.24
APOA1-201ENST00000236850 S4R3F8 94 aa7.32□□□□□ -1.24
APOA1-201ENST00000236850 USH2AO75445 5202 aa7.31□□□□□ -1.24
APOA1-201ENST00000236850 SSPOA2VEC9 5147 aa7.31□□□□□ -1.24
APOA1-201ENST00000236850 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
APOA1-201ENST00000236850 LCE2BO14633 110 aa7.29□□□□□ -1.24
APOA1-201ENST00000236850 LCA10Q71F78 164 aa7.27□□□□□ -1.25
APOA1-201ENST00000236850 ACYP2P14621 99 aa7.24□□□□□ -1.25
APOA1-201ENST00000236850 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
APOA1-201ENST00000236850 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
APOA1-201ENST00000236850 PCP4P48539 62 aa7.21□□□□□ -1.26
APOA1-201ENST00000236850 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
APOA1-201ENST00000236850 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
APOA1-201ENST00000236850 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
APOA1-201ENST00000236850 TMEM258P61165 79 aa7.12□□□□□ -1.27
APOA1-201ENST00000236850 COA5Q86WW8 74 aa7.12□□□□□ -1.27
APOA1-201ENST00000236850 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
APOA1-201ENST00000236850 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
APOA1-201ENST00000236850 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
APOA1-201ENST00000236850 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
APOA1-201ENST00000236850 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
APOA1-201ENST00000236850 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
APOA1-201ENST00000236850 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
APOA1-201ENST00000236850 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
APOA1-201ENST00000236850 H0YAA0 97 aa6.94□□□□□ -1.3
APOA1-201ENST00000236850 Q5VV11 94 aa6.93□□□□□ -1.3
APOA1-201ENST00000236850 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
APOA1-201ENST00000236850 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
APOA1-201ENST00000236850 P0C880 135 aa6.86□□□□□ -1.31
APOA1-201ENST00000236850 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
APOA1-201ENST00000236850 MT1BP07438 61 aa6.84□□□□□ -1.31
APOA1-201ENST00000236850 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
APOA1-201ENST00000236850 A6NN06 94 aa6.82□□□□□ -1.32
APOA1-201ENST00000236850 SEC61GP60059 68 aa6.79□□□□□ -1.32
APOA1-201ENST00000236850 A0A1B0GU69 56 aa6.74□□□□□ -1.33
APOA1-201ENST00000236850 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
APOA1-201ENST00000236850 M0QZ58 72 aa6.71□□□□□ -1.34
APOA1-201ENST00000236850 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
APOA1-201ENST00000236850 R4GN34 69 aa6.71□□□□□ -1.34
APOA1-201ENST00000236850 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
APOA1-201ENST00000236850 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
APOA1-201ENST00000236850 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
APOA1-201ENST00000236850 NEBP20929 6669 aa6.65□□□□□ -1.34
APOA1-201ENST00000236850 A0A1B0GU33 70 aa6.63□□□□□ -1.35
APOA1-201ENST00000236850 KRTAP20-1Q3LI63 56 aa6.63□□□□□ -1.35
APOA1-201ENST00000236850 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
APOA1-201ENST00000236850 Q1T7F1 81 aa6.61□□□□□ -1.35
APOA1-201ENST00000236850 KRTAP13-4Q3LI77 160 aa6.61□□□□□ -1.35
APOA1-201ENST00000236850 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
APOA1-201ENST00000236850 V9GYY9 64 aa6.61□□□□□ -1.35
APOA1-201ENST00000236850 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
APOA1-201ENST00000236850 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
APOA1-201ENST00000236850 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
APOA1-201ENST00000236850 PSPHP1O15172 72 aa6.56□□□□□ -1.36
APOA1-201ENST00000236850 A0A0D9SG42 100 aa6.49□□□□□ -1.37
APOA1-201ENST00000236850 UQCR11O14957 56 aa6.45□□□□□ -1.38
APOA1-201ENST00000236850 MT1XP80297 61 aa6.45□□□□□ -1.38
APOA1-201ENST00000236850 A8MU10 97 aa6.43□□□□□ -1.38
APOA1-201ENST00000236850 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
APOA1-201ENST00000236850 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
APOA1-201ENST00000236850 A6NED7 52 aa6.36□□□□□ -1.39
APOA1-201ENST00000236850 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
APOA1-201ENST00000236850 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
APOA1-201ENST00000236850 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
APOA1-201ENST00000236850 SVIPQ8NHG7 77 aa6.3□□□□□ -1.4
APOA1-201ENST00000236850 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
APOA1-201ENST00000236850 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
APOA1-201ENST00000236850 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
APOA1-201ENST00000236850 KMT2DO14686 5537 aa6.25□□□□□ -1.41
APOA1-201ENST00000236850 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
APOA1-201ENST00000236850 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
APOA1-201ENST00000236850 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
APOA1-201ENST00000236850 SPRR2EP22531 72 aa6.23□□□□□ -1.41
APOA1-201ENST00000236850 SPRR2BP35325 72 aa6.23□□□□□ -1.41
APOA1-201ENST00000236850 SPRR2AP35326 72 aa6.23□□□□□ -1.41
APOA1-201ENST00000236850 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
APOA1-201ENST00000236850 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
APOA1-201ENST00000236850 K7ERS5 55 aa6.14□□□□□ -1.43
APOA1-201ENST00000236850 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
APOA1-201ENST00000236850 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
APOA1-201ENST00000236850 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
APOA1-201ENST00000236850 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
APOA1-201ENST00000236850 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
APOA1-201ENST00000236850 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
APOA1-201ENST00000236850 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
APOA1-201ENST00000236850 SPRR2DP22532 72 aa6.02□□□□□ -1.45
APOA1-201ENST00000236850 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
APOA1-201ENST00000236850 TNP1P09430 55 aa5.89□□□□□ -1.47
APOA1-201ENST00000236850 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
APOA1-201ENST00000236850 ROMO1P60602 79 aa5.83□□□□□ -1.48
APOA1-201ENST00000236850 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms