RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
CDCA3-201ENST00000229265 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
CDCA3-201ENST00000229265 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
CDCA3-201ENST00000229265 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
CDCA3-201ENST00000229265 XP32Q5T750 250 aa5.64□□□□□ -1.51
CDCA3-201ENST00000229265 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
CDCA3-201ENST00000229265 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
CDCA3-201ENST00000229265 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
CDCA3-201ENST00000229265 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
CDCA3-201ENST00000229265 Q5VV11 94 aa5.58□□□□□ -1.52
CDCA3-201ENST00000229265 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
CDCA3-201ENST00000229265 PSPHP1O15172 72 aa5.56□□□□□ -1.52
CDCA3-201ENST00000229265 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
CDCA3-201ENST00000229265 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
CDCA3-201ENST00000229265 A0A1B0GU69 56 aa5.52□□□□□ -1.53
CDCA3-201ENST00000229265 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
CDCA3-201ENST00000229265 SEC61GP60059 68 aa5.52□□□□□ -1.53
CDCA3-201ENST00000229265 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
CDCA3-201ENST00000229265 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
CDCA3-201ENST00000229265 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
CDCA3-201ENST00000229265 KRTAP9-2Q9BYQ4 174 aa5.49□□□□□ -1.53
CDCA3-201ENST00000229265 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
CDCA3-201ENST00000229265 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
CDCA3-201ENST00000229265 A6NED7 52 aa5.46□□□□□ -1.54
CDCA3-201ENST00000229265 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
CDCA3-201ENST00000229265 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
CDCA3-201ENST00000229265 UQCR11O14957 56 aa5.44□□□□□ -1.54
CDCA3-201ENST00000229265 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
CDCA3-201ENST00000229265 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
CDCA3-201ENST00000229265 SPATA8Q6RVD6 105 aa5.4□□□□□ -1.54
CDCA3-201ENST00000229265 LCA10Q71F78 164 aa5.38□□□□□ -1.55
CDCA3-201ENST00000229265 S4R3F8 94 aa5.36□□□□□ -1.55
CDCA3-201ENST00000229265 MT1HP80294 61 aa5.34□□□□□ -1.55
CDCA3-201ENST00000229265 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
CDCA3-201ENST00000229265 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
CDCA3-201ENST00000229265 A0A1B0GU33 70 aa5.32□□□□□ -1.56
CDCA3-201ENST00000229265 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
CDCA3-201ENST00000229265 H0YAA0 97 aa5.28□□□□□ -1.56
CDCA3-201ENST00000229265 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
CDCA3-201ENST00000229265 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
CDCA3-201ENST00000229265 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
CDCA3-201ENST00000229265 LORP23490 312 aaPredicted RBP5.24□□□□□ -1.57
CDCA3-201ENST00000229265 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
CDCA3-201ENST00000229265 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
CDCA3-201ENST00000229265 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
CDCA3-201ENST00000229265 A8MU10 97 aa5.2□□□□□ -1.58
CDCA3-201ENST00000229265 A6NN06 94 aa5.19□□□□□ -1.58
CDCA3-201ENST00000229265 K7ERS5 55 aa5.16□□□□□ -1.58
CDCA3-201ENST00000229265 M0QZ58 72 aa5.16□□□□□ -1.58
CDCA3-201ENST00000229265 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
CDCA3-201ENST00000229265 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
CDCA3-201ENST00000229265 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
CDCA3-201ENST00000229265 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
CDCA3-201ENST00000229265 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
CDCA3-201ENST00000229265 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
CDCA3-201ENST00000229265 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
CDCA3-201ENST00000229265 USH2AO75445 5202 aa5.08□□□□□ -1.6
CDCA3-201ENST00000229265 P0C880 135 aa5.07□□□□□ -1.6
CDCA3-201ENST00000229265 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
CDCA3-201ENST00000229265 M0R2T5 61 aa5□□□□□ -1.61
CDCA3-201ENST00000229265 MT2AP02795 61 aa4.99□□□□□ -1.61
CDCA3-201ENST00000229265 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
CDCA3-201ENST00000229265 MT1FP04733 61 aa4.98□□□□□ -1.61
CDCA3-201ENST00000229265 R4GN34 69 aa4.97□□□□□ -1.61
CDCA3-201ENST00000229265 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
CDCA3-201ENST00000229265 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
CDCA3-201ENST00000229265 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
CDCA3-201ENST00000229265 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
CDCA3-201ENST00000229265 A0A0D9SG42 100 aa4.9□□□□□ -1.63
CDCA3-201ENST00000229265 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
CDCA3-201ENST00000229265 ROMO1P60602 79 aa4.9□□□□□ -1.63
CDCA3-201ENST00000229265 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
CDCA3-201ENST00000229265 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
CDCA3-201ENST00000229265 KRTAP12-2P59991 146 aa4.84□□□□□ -1.63
CDCA3-201ENST00000229265 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
CDCA3-201ENST00000229265 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
CDCA3-201ENST00000229265 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
CDCA3-201ENST00000229265 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
CDCA3-201ENST00000229265 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
CDCA3-201ENST00000229265 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
CDCA3-201ENST00000229265 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
CDCA3-201ENST00000229265 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
CDCA3-201ENST00000229265 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
CDCA3-201ENST00000229265 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
CDCA3-201ENST00000229265 KRTAP19-6Q3LI70 58 aa4.66□□□□□ -1.66
CDCA3-201ENST00000229265 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
CDCA3-201ENST00000229265 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
CDCA3-201ENST00000229265 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
CDCA3-201ENST00000229265 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
CDCA3-201ENST00000229265 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
CDCA3-201ENST00000229265 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
CDCA3-201ENST00000229265 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
CDCA3-201ENST00000229265 MT1BP07438 61 aa4.57□□□□□ -1.68
CDCA3-201ENST00000229265 TNP1P09430 55 aa4.54□□□□□ -1.68
CDCA3-201ENST00000229265 NEBP20929 6669 aa4.47□□□□□ -1.69
CDCA3-201ENST00000229265 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
CDCA3-201ENST00000229265 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
CDCA3-201ENST00000229265 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.71
CDCA3-201ENST00000229265 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
CDCA3-201ENST00000229265 KMT2DO14686 5537 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms