RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 GhrhP16043 103 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Lyg1Q9D7Q0 197 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Thsd7bQ6P4U0 1607 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ighv1-55A0A075B5W6 117 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 B1ARW8 110 aa11.2□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ighv8-4A0A0A6YW26 117 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 A530064D06RikQ8BNV8 229 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Tomm6Q9CQN3 74 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Bex1Q9R224 128 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 ArtnQ9Z0L2 224 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Prok1Q14A28 105 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ndufa4Q62425 82 aaKnown RBP11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Tmem30bQ8BHG3 353 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Lmo1Q924W9 156 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ubl5Q9EPV8 73 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Igkv4-72A0A0B4J1I4 117 aa11.19□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Igkv4-54A0A0G2JES9 117 aa11.18□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Lect2O88803 151 aa11.18□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Sdhaf1Q3U276 118 aa11.18□□□□□ -0.62
Col3a1-201ENSMUST00000087883 CtsgP28293 261 aa11.18□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Q8C708 225 aa11.18□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Rpl32P62911 135 aaKnown RBP11.18□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Slc25a48Q8BW66 306 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 C330021F23RikQ8C7T0 141 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Dpm3Q9D1Q4 92 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Hrct1Q9D6B9 109 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Reg3dQ9QUS9 175 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Il22ra2Q80XF5 230 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Spink10Q8CAC8 162 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Rasl10aQ8K5A4 203 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Gtsf1Q9DAN6 167 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Dnajc13D4AFX7 2248 aaKnown RBP11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Csrp1P97315 193 aaKnown RBP11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ndufa11Q9D8B4 141 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Igkv6-13A0A0G2JGY3 119 aa11.17□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Trav12-3A0A075B648 115 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Gm5129F6YHA9 99 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Cd24P24807 76 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Mustn1Q99JI1 82 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ighv1-62-2A0A0A6YXZ4 119 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 P01725 110 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 P01794 123 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 AmelxP63277 210 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Lhfpl1Q80SV1 220 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Col4a5Q63ZW6 1691 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Colca2F8VPY8 239 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 CtsbP10605 339 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Gata4Q08369 441 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 BB014433Q8C5R5 389 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Oxld1Q9CR10 201 aa11.16□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ighv8-8A0A0A6YXQ0 119 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Olfr312Q7TRZ9 308 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Them7Q9DCP4 223 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 GlrxQ9QUH0 107 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Gm15294V9GXA7 121 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 P01791 123 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 4930442H23RikQ9D5G7 103 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Plxna1P70206 1894 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Wdr81Q5ND34 1934 aa11.15□□□□□ -0.62
Col3a1-201ENSMUST00000087883 Ccl25O35903 144 aa11.15□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Tmem52Q9D702 196 aa11.15□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv12-89A0A0G2JGW8 112 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv3-9A0A140T8P4 119 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Zic4Q61467 341 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Q8R092 253 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 LitafQ9JLJ0 161 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm11733Q8BQP1 125 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Trav4n-4A0A075B615 110 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Chchd5Q9CQP3 110 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Fhl3Q9R059 289 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Exph5Q0VAV2 1960 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ighv1-39A0A075B5V5 117 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 P01649 108 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Shank1D3YZU1 2167 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Wnk2Q3UH66 2149 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gpr179E9PY61 2293 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Casp8ap2Q9WUF3 1962 aa11.14□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Trav14d-1A0A075B6B1 121 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm2174F6ZVF2 133 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv2-137A0A0B4J1H6 120 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv4-69A0A0B4J1I6 116 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Spink12Q9D256 87 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Zfp951A0A087WRH0 451 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv8-16A0A0G2JDG9 121 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm20726G3UX18 150 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ang5Q5GAN1 145 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Malrd1A2AJX4 2123 aa11.13□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ighv1-19A0A0A6YWX0 117 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv4-78A0A0A6YYE5 119 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Sslp1Q3UN54 99 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Minos1Q7TNS2 76 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Fhl4Q8CDC8 279 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Mpv17l2Q8VIK2 200 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Pear1Q8VIK5 1034 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ints1Q6P4S8 2195 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Luzp4B1AV09 449 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm15127B1AVZ5 449 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm15107B1B0X0 449 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm15085Q62012 449 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Pygo2Q80V76 405 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms