RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 ATRQ13535 2644 aa1.09□□□□□ -2.23
CCDC7-214ENST00000639453 DEFB108BQ8NET1 73 aa1.09□□□□□ -2.23
CCDC7-214ENST00000639453 APC2O95996 2303 aa1.08□□□□□ -2.24
CCDC7-214ENST00000639453 NBASA2RRP1 2371 aa1.08□□□□□ -2.24
CCDC7-214ENST00000639453 CHD8Q9HCK8 2581 aa1.07□□□□□ -2.24
CCDC7-214ENST00000639453 CELSR1Q9NYQ6 3014 aa1.07□□□□□ -2.24
CCDC7-214ENST00000639453 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
CCDC7-214ENST00000639453 COX14Q96I36 57 aa1.07□□□□□ -2.24
CCDC7-214ENST00000639453 Q9Y3F1 56 aa1.07□□□□□ -2.24
CCDC7-214ENST00000639453 HELZ2Q9BYK8 2649 aaKnown RBP1.07□□□□□ -2.24
CCDC7-214ENST00000639453 PIEZO1Q92508 2521 aa1.07□□□□□ -2.24
CCDC7-214ENST00000639453 SPTBN4Q9H254 2564 aa1.06□□□□□ -2.24
CCDC7-214ENST00000639453 CSMD3Q7Z407 3707 aa1.06□□□□□ -2.24
CCDC7-214ENST00000639453 PRM1P04553 51 aa1.06□□□□□ -2.24
CCDC7-214ENST00000639453 VWFP04275 2813 aa1.06□□□□□ -2.24
CCDC7-214ENST00000639453 CHD7Q9P2D1 2997 aa1.05□□□□□ -2.24
CCDC7-214ENST00000639453 BDP1A6H8Y1 2624 aa1.05□□□□□ -2.24
CCDC7-214ENST00000639453 CHD6Q8TD26 2715 aa1.05□□□□□ -2.24
CCDC7-214ENST00000639453 UBR5O95071 2799 aaPredicted RBP1.05□□□□□ -2.24
CCDC7-214ENST00000639453 HIVEP3Q5T1R4 2406 aa1.05□□□□□ -2.24
CCDC7-214ENST00000639453 DEFB133Q30KQ1 61 aa1.04□□□□□ -2.24
CCDC7-214ENST00000639453 TENM2Q9NT68 2774 aa1.03□□□□□ -2.24
CCDC7-214ENST00000639453 TNRC18O15417 2968 aaPredicted RBP1.03□□□□□ -2.24
CCDC7-214ENST00000639453 UBR4Q5T4S7 5183 aa1.02□□□□□ -2.25
CCDC7-214ENST00000639453 SETD2Q9BYW2 2564 aaPredicted RBP1.02□□□□□ -2.25
CCDC7-214ENST00000639453 MAP1BP46821 2468 aaKnown RBP1.01□□□□□ -2.25
CCDC7-214ENST00000639453 COL6A3P12111 3177 aa1.01□□□□□ -2.25
CCDC7-214ENST00000639453 A0A096LPF7 62 aa1.01□□□□□ -2.25
CCDC7-214ENST00000639453 MTORP42345 2549 aa1.01□□□□□ -2.25
CCDC7-214ENST00000639453 PTPN13Q12923 2485 aa1.01□□□□□ -2.25
CCDC7-214ENST00000639453 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
CCDC7-214ENST00000639453 FAM186AA6NE01 2351 aa1□□□□□ -2.25
CCDC7-214ENST00000639453 KRTAP8-1Q8IUC2 63 aa0.99□□□□□ -2.25
CCDC7-214ENST00000639453 CACNA1AO00555 2505 aa0.97□□□□□ -2.25
CCDC7-214ENST00000639453 FBN2P35556 2912 aa0.97□□□□□ -2.25
CCDC7-214ENST00000639453 CD52P31358 61 aa0.97□□□□□ -2.25
CCDC7-214ENST00000639453 LINC01556Q5JQF7 62 aa0.97□□□□□ -2.25
CCDC7-214ENST00000639453 RIF1Q5UIP0 2472 aaKnown RBP0.97□□□□□ -2.25
CCDC7-214ENST00000639453 ACANP16112 2415 aa0.96□□□□□ -2.26
CCDC7-214ENST00000639453 CEP250Q9BV73 2442 aa0.96□□□□□ -2.26
CCDC7-214ENST00000639453 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
CCDC7-214ENST00000639453 VPS13DQ5THJ4 4388 aa0.95□□□□□ -2.26
CCDC7-214ENST00000639453 USP24Q9UPU5 2620 aa0.95□□□□□ -2.26
CCDC7-214ENST00000639453 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
CCDC7-214ENST00000639453 NCOR2Q9Y618 2525 aa0.95□□□□□ -2.26
CCDC7-214ENST00000639453 MGAQ8IWI9 3026 aa0.94□□□□□ -2.26
CCDC7-214ENST00000639453 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
CCDC7-214ENST00000639453 GCN1Q92616 2671 aaKnown RBP0.93□□□□□ -2.26
CCDC7-214ENST00000639453 BSNQ9UPA5 3926 aa0.93□□□□□ -2.26
CCDC7-214ENST00000639453 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
CCDC7-214ENST00000639453 TNXBP22105 4242 aa0.93□□□□□ -2.26
CCDC7-214ENST00000639453 DNAH11Q96DT5 4516 aa0.92□□□□□ -2.26
CCDC7-214ENST00000639453 SPRR2DP22532 72 aa0.91□□□□□ -2.26
CCDC7-214ENST00000639453 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
CCDC7-214ENST00000639453 ANK2Q01484 3957 aa0.9□□□□□ -2.26
CCDC7-214ENST00000639453 LRRK2Q5S007 2527 aa0.9□□□□□ -2.26
CCDC7-214ENST00000639453 NF1P21359 2839 aa0.9□□□□□ -2.27
CCDC7-214ENST00000639453 SPRR2BP35325 72 aa0.89□□□□□ -2.27
CCDC7-214ENST00000639453 APCP25054 2843 aa0.89□□□□□ -2.27
CCDC7-214ENST00000639453 FLNCQ14315 2725 aa0.89□□□□□ -2.27
CCDC7-214ENST00000639453 LYSTQ99698 3801 aa0.89□□□□□ -2.27
CCDC7-214ENST00000639453 STAB1Q9NY15 2570 aa0.89□□□□□ -2.27
CCDC7-214ENST00000639453 ZFYVE26Q68DK2 2539 aa0.88□□□□□ -2.27
CCDC7-214ENST00000639453 MACF1Q9UPN3 7388 aaKnown RBP0.88□□□□□ -2.27
CCDC7-214ENST00000639453 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
CCDC7-214ENST00000639453 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
CCDC7-214ENST00000639453 MYCBP2O75592 4640 aa0.88□□□□□ -2.27
CCDC7-214ENST00000639453 PCLOQ9Y6V0 5065 aa0.88□□□□□ -2.27
CCDC7-214ENST00000639453 ACACBO00763 2458 aa0.88□□□□□ -2.27
CCDC7-214ENST00000639453 ANKHD1Q8IWZ3 2542 aaKnown RBP0.87□□□□□ -2.27
CCDC7-214ENST00000639453 FAT2Q9NYQ8 4349 aa0.87□□□□□ -2.27
CCDC7-214ENST00000639453 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
CCDC7-214ENST00000639453 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 FRYQ5TBA9 3013 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-214ENST00000639453 HTN3P15516 51 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 TENM3Q9P273 2699 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 PDZD2O15018 2839 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 SPG11Q96JI7 2443 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 NOTCH1P46531 2555 aa0.86□□□□□ -2.27
CCDC7-214ENST00000639453 PRKDCP78527 4128 aaKnown RBP0.86□□□□□ -2.27
CCDC7-214ENST00000639453 COL12A1Q99715 3063 aa0.85□□□□□ -2.27
CCDC7-214ENST00000639453 UTP20O75691 2785 aaKnown RBP0.85□□□□□ -2.27
CCDC7-214ENST00000639453 SMR3BP02814 79 aaPredicted RBP0.85□□□□□ -2.27
CCDC7-214ENST00000639453 MT1AP04731 61 aa0.85□□□□□ -2.27
CCDC7-214ENST00000639453 MUC2Q02817 5179 aa0.85□□□□□ -2.27
CCDC7-214ENST00000639453 KIAA1109Q2LD37 5005 aa0.85□□□□□ -2.27
CCDC7-214ENST00000639453 SONP18583 2426 aaKnown RBP0.85□□□□□ -2.27
CCDC7-214ENST00000639453 ZFHX4Q86UP3 3567 aa0.85□□□□□ -2.27
CCDC7-214ENST00000639453 ITPR3Q14573 2671 aa0.84□□□□□ -2.27
CCDC7-214ENST00000639453 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
CCDC7-214ENST00000639453 SPRR2AP35326 72 aa0.84□□□□□ -2.27
CCDC7-214ENST00000639453 SETXQ7Z333 2677 aaKnown RBP0.84□□□□□ -2.28
CCDC7-214ENST00000639453 NSD1Q96L73 2696 aaPredicted RBP0.84□□□□□ -2.28
CCDC7-214ENST00000639453 PKD1L1Q8TDX9 2849 aa0.83□□□□□ -2.28
CCDC7-214ENST00000639453 DCHS2Q6V1P9 2916 aa0.83□□□□□ -2.28
CCDC7-214ENST00000639453 COL7A1Q02388 2944 aa0.82□□□□□ -2.28
CCDC7-214ENST00000639453 DYNC2H1Q8NCM8 4307 aaKnown RBP0.82□□□□□ -2.28
CCDC7-214ENST00000639453 RANBP2P49792 3224 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms