RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
CCDC7-214ENST00000639453 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
CCDC7-214ENST00000639453 SENP3Q9H4L4 574 aaPredicted RBP24.33■■□□□ 1.49
CCDC7-214ENST00000639453 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-214ENST00000639453 FOXD1Q16676 465 aa22.53■■□□□ 1.2
CCDC7-214ENST00000639453 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.05
CCDC7-214ENST00000639453 MSH5O43196 834 aa21.29■■□□□ 1
CCDC7-214ENST00000639453 PIAS4Q8N2W9 510 aaPredicted RBP21.16■□□□□ 0.98
CCDC7-214ENST00000639453 ADRA2BP18089 450 aa20.95■□□□□ 0.94
CCDC7-214ENST00000639453 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
CCDC7-214ENST00000639453 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
CCDC7-214ENST00000639453 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
CCDC7-214ENST00000639453 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
CCDC7-214ENST00000639453 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
CCDC7-214ENST00000639453 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
CCDC7-214ENST00000639453 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
CCDC7-214ENST00000639453 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
CCDC7-214ENST00000639453 HOXD11P31277 338 aaPredicted RBP18.46■□□□□ 0.55
CCDC7-214ENST00000639453 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
CCDC7-214ENST00000639453 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
CCDC7-214ENST00000639453 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
CCDC7-214ENST00000639453 RNF39Q9H2S5 420 aa18.04■□□□□ 0.48
CCDC7-214ENST00000639453 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
CCDC7-214ENST00000639453 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
CCDC7-214ENST00000639453 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
CCDC7-214ENST00000639453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC7-214ENST00000639453 KCNA4P22459 653 aa17.38■□□□□ 0.37
CCDC7-214ENST00000639453 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
CCDC7-214ENST00000639453 CAPN15O75808 1086 aa17.08■□□□□ 0.32
CCDC7-214ENST00000639453 APLP2Q06481 763 aa17.02■□□□□ 0.32
CCDC7-214ENST00000639453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
CCDC7-214ENST00000639453 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
CCDC7-214ENST00000639453 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
CCDC7-214ENST00000639453 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
CCDC7-214ENST00000639453 DSG3P32926 999 aa16.87■□□□□ 0.29
CCDC7-214ENST00000639453 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
CCDC7-214ENST00000639453 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
CCDC7-214ENST00000639453 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
CCDC7-214ENST00000639453 ABCB7O75027 752 aa16.58■□□□□ 0.24
CCDC7-214ENST00000639453 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
CCDC7-214ENST00000639453 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
CCDC7-214ENST00000639453 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
CCDC7-214ENST00000639453 POLA2Q14181 598 aa16.28■□□□□ 0.2
CCDC7-214ENST00000639453 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
CCDC7-214ENST00000639453 POTEHQ6S545 545 aa16.27■□□□□ 0.2
CCDC7-214ENST00000639453 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
CCDC7-214ENST00000639453 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
CCDC7-214ENST00000639453 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
CCDC7-214ENST00000639453 ZBTB22O15209 634 aa15.87■□□□□ 0.13
CCDC7-214ENST00000639453 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
CCDC7-214ENST00000639453 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
CCDC7-214ENST00000639453 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
CCDC7-214ENST00000639453 FBLN2P98095 1184 aa15.66■□□□□ 0.1
CCDC7-214ENST00000639453 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
CCDC7-214ENST00000639453 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
CCDC7-214ENST00000639453 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
CCDC7-214ENST00000639453 SPDYE2Q495Y8 402 aa15.5■□□□□ 0.07
CCDC7-214ENST00000639453 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
CCDC7-214ENST00000639453 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
CCDC7-214ENST00000639453 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
CCDC7-214ENST00000639453 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC7-214ENST00000639453 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
CCDC7-214ENST00000639453 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
CCDC7-214ENST00000639453 HAX1O00165 279 aa15.25■□□□□ 0.03
CCDC7-214ENST00000639453 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
CCDC7-214ENST00000639453 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
CCDC7-214ENST00000639453 SSUH2Q9Y2M2 353 aa15.18■□□□□ 0.02
CCDC7-214ENST00000639453 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
CCDC7-214ENST00000639453 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
CCDC7-214ENST00000639453 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
CCDC7-214ENST00000639453 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC7-214ENST00000639453 PRR29P0C7W0 189 aa15□□□□□ -0.01
CCDC7-214ENST00000639453 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
CCDC7-214ENST00000639453 EVX2Q03828 476 aa14.81□□□□□ -0.04
CCDC7-214ENST00000639453 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
CCDC7-214ENST00000639453 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
CCDC7-214ENST00000639453 SPDYE4A6NLX3 237 aa14.69□□□□□ -0.06
CCDC7-214ENST00000639453 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
CCDC7-214ENST00000639453 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
CCDC7-214ENST00000639453 GABBR2O75899 941 aa14.61□□□□□ -0.07
CCDC7-214ENST00000639453 CLCN6P51797 869 aa14.57□□□□□ -0.08
CCDC7-214ENST00000639453 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
CCDC7-214ENST00000639453 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
CCDC7-214ENST00000639453 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC7-214ENST00000639453 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
CCDC7-214ENST00000639453 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
CCDC7-214ENST00000639453 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
CCDC7-214ENST00000639453 LHX8Q68G74 356 aa14.32□□□□□ -0.12
CCDC7-214ENST00000639453 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
CCDC7-214ENST00000639453 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
CCDC7-214ENST00000639453 PROM2Q8N271 834 aa14.18□□□□□ -0.14
CCDC7-214ENST00000639453 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
CCDC7-214ENST00000639453 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
CCDC7-214ENST00000639453 PHF12Q96QT6 1004 aa14.11□□□□□ -0.15
CCDC7-214ENST00000639453 MIER1Q8N108 512 aa14.09□□□□□ -0.15
CCDC7-214ENST00000639453 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
CCDC7-214ENST00000639453 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
CCDC7-214ENST00000639453 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
CCDC7-214ENST00000639453 MS4A3Q96HJ5 214 aa13.93□□□□□ -0.18
CCDC7-214ENST00000639453 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms