RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 CACNA1AO00555 2505 aa1.15□□□□□ -2.23
LINC00343-211ENST00000608426 HTN1P15515 57 aa1.15□□□□□ -2.23
LINC00343-211ENST00000608426 FRYQ5TBA9 3013 aa1.14□□□□□ -2.23
LINC00343-211ENST00000608426 PRKDCP78527 4128 aaKnown RBP1.14□□□□□ -2.23
LINC00343-211ENST00000608426 ZFHX4Q86UP3 3567 aa1.13□□□□□ -2.23
LINC00343-211ENST00000608426 SPTBN4Q9H254 2564 aa1.13□□□□□ -2.23
LINC00343-211ENST00000608426 SPENQ96T58 3664 aaKnown RBP1.13□□□□□ -2.23
LINC00343-211ENST00000608426 VPS13BQ7Z7G8 4022 aa1.13□□□□□ -2.23
LINC00343-211ENST00000608426 SPART-AS1P0CW21 52 aa1.13□□□□□ -2.23
LINC00343-211ENST00000608426 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
LINC00343-211ENST00000608426 KMT2AQ03164 3969 aa1.13□□□□□ -2.23
LINC00343-211ENST00000608426 PDZD2O15018 2839 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 RANBP2P49792 3224 aaKnown RBP1.12□□□□□ -2.23
LINC00343-211ENST00000608426 HECTD1Q9ULT8 2610 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 C9orf92A6NGG3 77 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 SMR3AQ99954 134 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 DNAH8Q96JB1 4490 aa1.12□□□□□ -2.23
LINC00343-211ENST00000608426 FBN2P35556 2912 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 AKAP9Q99996 3911 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 A0A096LNI7 61 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 DEFB136Q30KP8 78 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 COX14Q96I36 57 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 NOTCH1P46531 2555 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 COL6A3P12111 3177 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 NAV2Q8IVL1 2488 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 ATRQ13535 2644 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 SRCAPQ6ZRS2 3230 aa1.11□□□□□ -2.23
LINC00343-211ENST00000608426 CCDC168Q8NDH2 2452 aa1.1□□□□□ -2.23
LINC00343-211ENST00000608426 FAT2Q9NYQ8 4349 aa1.1□□□□□ -2.23
LINC00343-211ENST00000608426 DCHS2Q6V1P9 2916 aa1.09□□□□□ -2.23
LINC00343-211ENST00000608426 NCOR1O75376 2440 aa1.09□□□□□ -2.23
LINC00343-211ENST00000608426 CHD6Q8TD26 2715 aa1.09□□□□□ -2.23
LINC00343-211ENST00000608426 ZNF469Q96JG9 3925 aaPredicted RBP1.09□□□□□ -2.24
LINC00343-211ENST00000608426 RELNP78509 3460 aa1.08□□□□□ -2.24
LINC00343-211ENST00000608426 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
LINC00343-211ENST00000608426 DYNC2H1Q8NCM8 4307 aaKnown RBP1.07□□□□□ -2.24
LINC00343-211ENST00000608426 H3BNG1 76 aa1.07□□□□□ -2.24
LINC00343-211ENST00000608426 CFAP54Q96N23 3096 aa1.07□□□□□ -2.24
LINC00343-211ENST00000608426 PKHD1L1Q86WI1 4243 aa1.06□□□□□ -2.24
LINC00343-211ENST00000608426 TENM3Q9P273 2699 aa1.05□□□□□ -2.24
LINC00343-211ENST00000608426 APC2O95996 2303 aa1.05□□□□□ -2.24
LINC00343-211ENST00000608426 SETD2Q9BYW2 2564 aaPredicted RBP1.05□□□□□ -2.24
LINC00343-211ENST00000608426 DNAH3Q8TD57 4116 aa1.04□□□□□ -2.24
LINC00343-211ENST00000608426 DNAH2Q9P225 4427 aa1.04□□□□□ -2.24
LINC00343-211ENST00000608426 DEFB110Q30KQ9 67 aa1.04□□□□□ -2.24
LINC00343-211ENST00000608426 DEFB124Q8NES8 71 aa1.04□□□□□ -2.24
LINC00343-211ENST00000608426 DEFB108BQ8NET1 73 aa1.04□□□□□ -2.24
LINC00343-211ENST00000608426 U3KQA8 63 aa1.03□□□□□ -2.24
LINC00343-211ENST00000608426 DNAH7Q8WXX0 4024 aa1.03□□□□□ -2.24
LINC00343-211ENST00000608426 FRYLO94915 3013 aa1.03□□□□□ -2.24
LINC00343-211ENST00000608426 TNXBP22105 4242 aa1.03□□□□□ -2.25
LINC00343-211ENST00000608426 CREBBPQ92793 2442 aa1.03□□□□□ -2.25
LINC00343-211ENST00000608426 COL12A1Q99715 3063 aa1.02□□□□□ -2.25
LINC00343-211ENST00000608426 ANK3Q12955 4377 aaKnown RBP1.02□□□□□ -2.25
LINC00343-211ENST00000608426 PRM1P04553 51 aa1.02□□□□□ -2.25
LINC00343-211ENST00000608426 APCP25054 2843 aa1.02□□□□□ -2.25
LINC00343-211ENST00000608426 HECTD4Q9Y4D8 3996 aa1.02□□□□□ -2.25
LINC00343-211ENST00000608426 NF1P21359 2839 aa1.01□□□□□ -2.25
LINC00343-211ENST00000608426 C5orf42Q9H799 3197 aa1.01□□□□□ -2.25
LINC00343-211ENST00000608426 FRAS1Q86XX4 4008 aa1.01□□□□□ -2.25
LINC00343-211ENST00000608426 ITPR3Q14573 2671 aa1.01□□□□□ -2.25
LINC00343-211ENST00000608426 BDP1A6H8Y1 2624 aa1.01□□□□□ -2.25
LINC00343-211ENST00000608426 PIEZO1Q92508 2521 aa1□□□□□ -2.25
LINC00343-211ENST00000608426 NBASA2RRP1 2371 aa1□□□□□ -2.25
LINC00343-211ENST00000608426 SPTBN5Q9NRC6 3674 aaKnown RBP1□□□□□ -2.25
LINC00343-211ENST00000608426 WDR87Q6ZQQ6 2873 aa1□□□□□ -2.25
LINC00343-211ENST00000608426 HSPG2P98160 4391 aa1□□□□□ -2.25
LINC00343-211ENST00000608426 ZZEF1O43149 2961 aa0.99□□□□□ -2.25
LINC00343-211ENST00000608426 COL7A1Q02388 2944 aa0.99□□□□□ -2.25
LINC00343-211ENST00000608426 USP24Q9UPU5 2620 aa0.99□□□□□ -2.25
LINC00343-211ENST00000608426 CHD8Q9HCK8 2581 aa0.99□□□□□ -2.25
LINC00343-211ENST00000608426 TACC2O95359 2948 aa0.99□□□□□ -2.25
LINC00343-211ENST00000608426 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
LINC00343-211ENST00000608426 GCN1Q92616 2671 aaKnown RBP0.98□□□□□ -2.25
LINC00343-211ENST00000608426 SZT2Q5T011 3432 aa0.98□□□□□ -2.25
LINC00343-211ENST00000608426 ATMQ13315 3056 aa0.97□□□□□ -2.25
LINC00343-211ENST00000608426 CUBNO60494 3623 aa0.97□□□□□ -2.25
LINC00343-211ENST00000608426 CELSR3Q9NYQ7 3312 aa0.97□□□□□ -2.25
LINC00343-211ENST00000608426 SMG1Q96Q15 3661 aaKnown RBP0.97□□□□□ -2.25
LINC00343-211ENST00000608426 KRTAP8-1Q8IUC2 63 aa0.97□□□□□ -2.25
LINC00343-211ENST00000608426 FLNCQ14315 2725 aa0.97□□□□□ -2.25
LINC00343-211ENST00000608426 USP9YO00507 2555 aaPredicted RBP0.97□□□□□ -2.25
LINC00343-211ENST00000608426 DMXL1Q9Y485 3027 aa0.97□□□□□ -2.25
LINC00343-211ENST00000608426 LAMA5O15230 3695 aa0.96□□□□□ -2.26
LINC00343-211ENST00000608426 PRUNE2Q8WUY3 3088 aa0.96□□□□□ -2.26
LINC00343-211ENST00000608426 HUWE1Q7Z6Z7 4374 aaKnown RBP0.96□□□□□ -2.26
LINC00343-211ENST00000608426 DMXL2Q8TDJ6 3036 aa0.96□□□□□ -2.26
LINC00343-211ENST00000608426 A0A096LPF7 62 aa0.96□□□□□ -2.26
LINC00343-211ENST00000608426 CEP350Q5VT06 3117 aa0.96□□□□□ -2.26
LINC00343-211ENST00000608426 PKD1P98161 4303 aa0.96□□□□□ -2.26
LINC00343-211ENST00000608426 FLGP20930 4061 aaPredicted RBP0.95□□□□□ -2.26
LINC00343-211ENST00000608426 DNAH6Q9C0G6 4158 aa0.95□□□□□ -2.26
LINC00343-211ENST00000608426 HIVEP3Q5T1R4 2406 aa0.95□□□□□ -2.26
LINC00343-211ENST00000608426 NBEAQ8NFP9 2946 aa0.95□□□□□ -2.26
LINC00343-211ENST00000608426 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
LINC00343-211ENST00000608426 PKD1L1Q8TDX9 2849 aa0.95□□□□□ -2.26
LINC00343-211ENST00000608426 MKI67P46013 3256 aaKnown RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms