RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 AEBP2Q6ZN18 517 aaPredicted RBP31.94■■■□□ 2.7
LINC00343-211ENST00000608426 CHIC1Q5VXU3 224 aa31.22■■■□□ 2.59
LINC00343-211ENST00000608426 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
LINC00343-211ENST00000608426 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
LINC00343-211ENST00000608426 PLPPR3Q6T4P5 718 aa25.38■■□□□ 1.65
LINC00343-211ENST00000608426 FOXD1Q16676 465 aa25.16■■□□□ 1.62
LINC00343-211ENST00000608426 ADRA2BP18089 450 aa24.23■■□□□ 1.47
LINC00343-211ENST00000608426 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
LINC00343-211ENST00000608426 PIAS4Q8N2W9 510 aaPredicted RBP23.78■■□□□ 1.4
LINC00343-211ENST00000608426 MSH5O43196 834 aa23.2■■□□□ 1.3
LINC00343-211ENST00000608426 PPP4R3CPQ6ZMV5 832 aa22.37■■□□□ 1.17
LINC00343-211ENST00000608426 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
LINC00343-211ENST00000608426 MAPK8IP2Q13387 824 aaPredicted RBP21.98■■□□□ 1.11
LINC00343-211ENST00000608426 KCNA4P22459 653 aa21.88■■□□□ 1.09
LINC00343-211ENST00000608426 NCBP3Q53F19 620 aaKnown RBP21.8■■□□□ 1.08
LINC00343-211ENST00000608426 CNKSR2Q8WXI2 1034 aa21.73■■□□□ 1.07
LINC00343-211ENST00000608426 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
LINC00343-211ENST00000608426 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
LINC00343-211ENST00000608426 RNF216Q9NWF9 866 aaPredicted RBP21.29■■□□□ 1
LINC00343-211ENST00000608426 HOXD11P31277 338 aaPredicted RBP21.18■□□□□ 0.98
LINC00343-211ENST00000608426 POTEDQ86YR6 584 aa21.1■□□□□ 0.97
LINC00343-211ENST00000608426 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
LINC00343-211ENST00000608426 DCAF8L1A6NGE4 600 aa20.8■□□□□ 0.92
LINC00343-211ENST00000608426 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
LINC00343-211ENST00000608426 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
LINC00343-211ENST00000608426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.83
LINC00343-211ENST00000608426 SLC4A2P04920 1241 aa20.24■□□□□ 0.83
LINC00343-211ENST00000608426 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
LINC00343-211ENST00000608426 ZBTB22O15209 634 aa20.11■□□□□ 0.81
LINC00343-211ENST00000608426 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
LINC00343-211ENST00000608426 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
LINC00343-211ENST00000608426 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
LINC00343-211ENST00000608426 MYCNP04198 464 aaPredicted RBP19.84■□□□□ 0.77
LINC00343-211ENST00000608426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
LINC00343-211ENST00000608426 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
LINC00343-211ENST00000608426 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
LINC00343-211ENST00000608426 SAMD1Q6SPF0 538 aaPredicted RBP19.58■□□□□ 0.72
LINC00343-211ENST00000608426 APLP2Q06481 763 aa19.46■□□□□ 0.71
LINC00343-211ENST00000608426 CACNB1Q02641 598 aaPredicted RBP19.4■□□□□ 0.7
LINC00343-211ENST00000608426 ATXN8OSP0DMR3 200 aa19.38■□□□□ 0.69
LINC00343-211ENST00000608426 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
LINC00343-211ENST00000608426 CAPN15O75808 1086 aa19.31■□□□□ 0.68
LINC00343-211ENST00000608426 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
LINC00343-211ENST00000608426 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
LINC00343-211ENST00000608426 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
LINC00343-211ENST00000608426 ABCB7O75027 752 aa18.95■□□□□ 0.62
LINC00343-211ENST00000608426 DSG3P32926 999 aa18.92■□□□□ 0.62
LINC00343-211ENST00000608426 POLA2Q14181 598 aa18.88■□□□□ 0.61
LINC00343-211ENST00000608426 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
LINC00343-211ENST00000608426 FBLN2P98095 1184 aa18.53■□□□□ 0.56
LINC00343-211ENST00000608426 MKRN4PQ13434 485 aaPredicted RBP18.45■□□□□ 0.54
LINC00343-211ENST00000608426 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
LINC00343-211ENST00000608426 FKBP8Q14318 412 aa18.14■□□□□ 0.49
LINC00343-211ENST00000608426 SPDYE4A6NLX3 237 aa18.08■□□□□ 0.48
LINC00343-211ENST00000608426 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
LINC00343-211ENST00000608426 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
LINC00343-211ENST00000608426 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
LINC00343-211ENST00000608426 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
LINC00343-211ENST00000608426 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.48
LINC00343-211ENST00000608426 SSUH2Q9Y2M2 353 aa17.9■□□□□ 0.46
LINC00343-211ENST00000608426 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
LINC00343-211ENST00000608426 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
LINC00343-211ENST00000608426 PROM2Q8N271 834 aa17.71■□□□□ 0.43
LINC00343-211ENST00000608426 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
LINC00343-211ENST00000608426 SPDYE1Q8NFV5 336 aaPredicted RBP17.54■□□□□ 0.4
LINC00343-211ENST00000608426 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
LINC00343-211ENST00000608426 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
LINC00343-211ENST00000608426 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
LINC00343-211ENST00000608426 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
LINC00343-211ENST00000608426 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
LINC00343-211ENST00000608426 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
LINC00343-211ENST00000608426 VASPP50552 380 aaPredicted RBP17.23■□□□□ 0.35
LINC00343-211ENST00000608426 MIER1Q8N108 512 aa17.17■□□□□ 0.34
LINC00343-211ENST00000608426 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
LINC00343-211ENST00000608426 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC00343-211ENST00000608426 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
LINC00343-211ENST00000608426 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
LINC00343-211ENST00000608426 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
LINC00343-211ENST00000608426 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
LINC00343-211ENST00000608426 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
LINC00343-211ENST00000608426 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
LINC00343-211ENST00000608426 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
LINC00343-211ENST00000608426 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
LINC00343-211ENST00000608426 MNX1P50219 401 aaPredicted RBP16.87■□□□□ 0.29
LINC00343-211ENST00000608426 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
LINC00343-211ENST00000608426 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00343-211ENST00000608426 SPOCK2Q92563 424 aa16.8■□□□□ 0.28
LINC00343-211ENST00000608426 POTEHQ6S545 545 aa16.73■□□□□ 0.27
LINC00343-211ENST00000608426 NUBP1P53384 320 aa16.68■□□□□ 0.26
LINC00343-211ENST00000608426 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
LINC00343-211ENST00000608426 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
LINC00343-211ENST00000608426 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
LINC00343-211ENST00000608426 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
LINC00343-211ENST00000608426 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
LINC00343-211ENST00000608426 HAX1O00165 279 aa16.56■□□□□ 0.24
LINC00343-211ENST00000608426 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
LINC00343-211ENST00000608426 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
LINC00343-211ENST00000608426 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
LINC00343-211ENST00000608426 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
LINC00343-211ENST00000608426 GSE1Q14687 1217 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms