RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
HDAC7-217ENST00000459625 KRTAP1-4P0C5Y4 121 aa8.33□□□□□ -1.08
HDAC7-217ENST00000459625 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
HDAC7-217ENST00000459625 UBR5O95071 2799 aaPredicted RBP8.32□□□□□ -1.08
HDAC7-217ENST00000459625 SZT2Q5T011 3432 aa8.29□□□□□ -1.08
HDAC7-217ENST00000459625 DSPP15924 2871 aaKnown RBP8.28□□□□□ -1.08
HDAC7-217ENST00000459625 APCP25054 2843 aa8.26□□□□□ -1.09
HDAC7-217ENST00000459625 VPS13AQ96RL7 3174 aa8.26□□□□□ -1.09
HDAC7-217ENST00000459625 H0YAA0 97 aa8.26□□□□□ -1.09
HDAC7-217ENST00000459625 CFAP47Q6ZTR5 3102 aa8.26□□□□□ -1.09
HDAC7-217ENST00000459625 DMXL2Q8TDJ6 3036 aa8.25□□□□□ -1.09
HDAC7-217ENST00000459625 TRANK1O15050 2925 aa8.25□□□□□ -1.09
HDAC7-217ENST00000459625 VCANP13611 3396 aa8.23□□□□□ -1.09
HDAC7-217ENST00000459625 KALRNO60229 2985 aa8.2□□□□□ -1.1
HDAC7-217ENST00000459625 COL6A3P12111 3177 aa8.2□□□□□ -1.1
HDAC7-217ENST00000459625 HIVEP1P15822 2718 aa8.19□□□□□ -1.1
HDAC7-217ENST00000459625 TACC2O95359 2948 aa8.17□□□□□ -1.1
HDAC7-217ENST00000459625 KRTAP13-3Q3SY46 172 aa8.16□□□□□ -1.1
HDAC7-217ENST00000459625 ASH1LQ9NR48 2969 aaKnown RBP8.15□□□□□ -1.1
HDAC7-217ENST00000459625 LAMA1P25391 3075 aa8.15□□□□□ -1.11
HDAC7-217ENST00000459625 UTP20O75691 2785 aaKnown RBP8.13□□□□□ -1.11
HDAC7-217ENST00000459625 SPEGQ15772 3267 aa8.11□□□□□ -1.11
HDAC7-217ENST00000459625 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
HDAC7-217ENST00000459625 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
HDAC7-217ENST00000459625 LRBAP50851 2863 aa8.02□□□□□ -1.13
HDAC7-217ENST00000459625 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
HDAC7-217ENST00000459625 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
HDAC7-217ENST00000459625 EYSQ5T1H1 3165 aa7.96□□□□□ -1.14
HDAC7-217ENST00000459625 COL12A1Q99715 3063 aa7.93□□□□□ -1.14
HDAC7-217ENST00000459625 MYO15AQ9UKN7 3530 aa7.93□□□□□ -1.14
HDAC7-217ENST00000459625 FRYLO94915 3013 aa7.93□□□□□ -1.14
HDAC7-217ENST00000459625 ATMQ13315 3056 aa7.92□□□□□ -1.14
HDAC7-217ENST00000459625 NBEAQ8NFP9 2946 aa7.91□□□□□ -1.14
HDAC7-217ENST00000459625 BOD1L1Q8NFC6 3051 aa7.89□□□□□ -1.15
HDAC7-217ENST00000459625 FLNCQ14315 2725 aa7.88□□□□□ -1.15
HDAC7-217ENST00000459625 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
HDAC7-217ENST00000459625 SPTBN5Q9NRC6 3674 aaKnown RBP7.86□□□□□ -1.15
HDAC7-217ENST00000459625 TENM1Q9UKZ4 2725 aa7.83□□□□□ -1.16
HDAC7-217ENST00000459625 TENM2Q9NT68 2774 aa7.83□□□□□ -1.16
HDAC7-217ENST00000459625 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
HDAC7-217ENST00000459625 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
HDAC7-217ENST00000459625 ADGRG4Q8IZF6 3080 aa7.74□□□□□ -1.17
HDAC7-217ENST00000459625 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
HDAC7-217ENST00000459625 ZZEF1O43149 2961 aa7.71□□□□□ -1.17
HDAC7-217ENST00000459625 DCHS2Q6V1P9 2916 aa7.69□□□□□ -1.18
HDAC7-217ENST00000459625 WDFY3Q8IZQ1 3526 aa7.65□□□□□ -1.18
HDAC7-217ENST00000459625 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
HDAC7-217ENST00000459625 NF1P21359 2839 aa7.57□□□□□ -1.2
HDAC7-217ENST00000459625 TGP01266 2768 aa7.56□□□□□ -1.2
HDAC7-217ENST00000459625 TENM3Q9P273 2699 aa7.56□□□□□ -1.2
HDAC7-217ENST00000459625 LOC400499M0QZD8 3231 aa7.56□□□□□ -1.2
HDAC7-217ENST00000459625 CELSR1Q9NYQ6 3014 aa7.51□□□□□ -1.21
HDAC7-217ENST00000459625 ZFHX4Q86UP3 3567 aa7.51□□□□□ -1.21
HDAC7-217ENST00000459625 ASPMQ8IZT6 3477 aa7.51□□□□□ -1.21
HDAC7-217ENST00000459625 NBPF19A0A087WUL8 3843 aa7.49□□□□□ -1.21
HDAC7-217ENST00000459625 PKD1L1Q8TDX9 2849 aa7.49□□□□□ -1.21
HDAC7-217ENST00000459625 TNRC18O15417 2968 aaPredicted RBP7.46□□□□□ -1.21
HDAC7-217ENST00000459625 DMXL1Q9Y485 3027 aa7.46□□□□□ -1.22
HDAC7-217ENST00000459625 VWFP04275 2813 aa7.45□□□□□ -1.22
HDAC7-217ENST00000459625 PDZD2O15018 2839 aa7.42□□□□□ -1.22
HDAC7-217ENST00000459625 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
HDAC7-217ENST00000459625 DCHS1Q96JQ0 3298 aa7.39□□□□□ -1.23
HDAC7-217ENST00000459625 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
HDAC7-217ENST00000459625 ZANQ9Y493 2812 aa7.35□□□□□ -1.23
HDAC7-217ENST00000459625 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
HDAC7-217ENST00000459625 RELNP78509 3460 aa7.31□□□□□ -1.24
HDAC7-217ENST00000459625 FBN2P35556 2912 aa7.31□□□□□ -1.24
HDAC7-217ENST00000459625 LAMA5O15230 3695 aa7.29□□□□□ -1.24
HDAC7-217ENST00000459625 DMDP11532 3685 aa7.24□□□□□ -1.25
HDAC7-217ENST00000459625 KRTAP4-5Q9BYR2 181 aa7.22□□□□□ -1.25
HDAC7-217ENST00000459625 CSMD1Q96PZ7 3565 aa7.19□□□□□ -1.26
HDAC7-217ENST00000459625 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
HDAC7-217ENST00000459625 HRNRQ86YZ3 2850 aaPredicted RBP7.16□□□□□ -1.26
HDAC7-217ENST00000459625 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
HDAC7-217ENST00000459625 MUC3AQ02505 3323 aa7.1□□□□□ -1.27
HDAC7-217ENST00000459625 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
HDAC7-217ENST00000459625 SMG1Q96Q15 3661 aaKnown RBP7.08□□□□□ -1.28
HDAC7-217ENST00000459625 MT1HL1P0DM35 61 aa7.07□□□□□ -1.28
HDAC7-217ENST00000459625 ZFHX3Q15911 3703 aa7.05□□□□□ -1.28
HDAC7-217ENST00000459625 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
HDAC7-217ENST00000459625 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
HDAC7-217ENST00000459625 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
HDAC7-217ENST00000459625 CUBNO60494 3623 aa7□□□□□ -1.29
HDAC7-217ENST00000459625 SVEP1Q4LDE5 3571 aa7□□□□□ -1.29
HDAC7-217ENST00000459625 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
HDAC7-217ENST00000459625 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
HDAC7-217ENST00000459625 INE1O15225 51 aa6.96□□□□□ -1.3
HDAC7-217ENST00000459625 FBN3Q75N90 2809 aa6.88□□□□□ -1.31
HDAC7-217ENST00000459625 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
HDAC7-217ENST00000459625 SPENQ96T58 3664 aaKnown RBP6.82□□□□□ -1.32
HDAC7-217ENST00000459625 MEGF8Q7Z7M0 2845 aa6.8□□□□□ -1.32
HDAC7-217ENST00000459625 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
HDAC7-217ENST00000459625 COL7A1Q02388 2944 aa6.77□□□□□ -1.33
HDAC7-217ENST00000459625 ANK3Q12955 4377 aaKnown RBP6.75□□□□□ -1.33
HDAC7-217ENST00000459625 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
HDAC7-217ENST00000459625 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
HDAC7-217ENST00000459625 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
HDAC7-217ENST00000459625 SPRR2FQ96RM1 72 aa6.58□□□□□ -1.36
HDAC7-217ENST00000459625 TRRAPQ9Y4A5 3859 aa6.57□□□□□ -1.36
HDAC7-217ENST00000459625 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms