RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 XP32Q5T750 250 aa6.18□□□□□ -1.42
SLC38A1-201ENST00000398637 SPEGQ15772 3267 aa6.16□□□□□ -1.42
SLC38A1-201ENST00000398637 COL6A3P12111 3177 aa6.16□□□□□ -1.42
SLC38A1-201ENST00000398637 VPS13AQ96RL7 3174 aa6.15□□□□□ -1.43
SLC38A1-201ENST00000398637 HIVEP1P15822 2718 aa6.14□□□□□ -1.43
SLC38A1-201ENST00000398637 LAMA1P25391 3075 aa6.13□□□□□ -1.43
SLC38A1-201ENST00000398637 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
SLC38A1-201ENST00000398637 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
SLC38A1-201ENST00000398637 ITPR1Q14643 2758 aa6.12□□□□□ -1.43
SLC38A1-201ENST00000398637 NDUFAF8A1L188 74 aa6.11□□□□□ -1.43
SLC38A1-201ENST00000398637 TNRC18O15417 2968 aaPredicted RBP6.11□□□□□ -1.43
SLC38A1-201ENST00000398637 KRTAP29-1A8MX34 341 aaPredicted RBP6.11□□□□□ -1.43
SLC38A1-201ENST00000398637 Q5XG85 94 aa6.11□□□□□ -1.43
SLC38A1-201ENST00000398637 CYSTM1Q9H1C7 97 aa6.11□□□□□ -1.43
SLC38A1-201ENST00000398637 ASH1LQ9NR48 2969 aaKnown RBP6.1□□□□□ -1.43
SLC38A1-201ENST00000398637 FRYLO94915 3013 aa6.1□□□□□ -1.43
SLC38A1-201ENST00000398637 CFAP47Q6ZTR5 3102 aa6.08□□□□□ -1.44
SLC38A1-201ENST00000398637 TACC2O95359 2948 aa6.08□□□□□ -1.44
SLC38A1-201ENST00000398637 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
SLC38A1-201ENST00000398637 LRBAP50851 2863 aa6.04□□□□□ -1.44
SLC38A1-201ENST00000398637 KALRNO60229 2985 aa6.04□□□□□ -1.44
SLC38A1-201ENST00000398637 HTTP42858 3142 aa6.03□□□□□ -1.44
SLC38A1-201ENST00000398637 COL12A1Q99715 3063 aa6.01□□□□□ -1.45
SLC38A1-201ENST00000398637 NF1P21359 2839 aa5.99□□□□□ -1.45
SLC38A1-201ENST00000398637 USP34Q70CQ2 3546 aa5.98□□□□□ -1.45
SLC38A1-201ENST00000398637 KRTAP13-1Q8IUC0 172 aa5.98□□□□□ -1.45
SLC38A1-201ENST00000398637 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
SLC38A1-201ENST00000398637 TENM3Q9P273 2699 aa5.95□□□□□ -1.46
SLC38A1-201ENST00000398637 CELSR2Q9HCU4 2923 aa5.95□□□□□ -1.46
SLC38A1-201ENST00000398637 SPTBN5Q9NRC6 3674 aaKnown RBP5.94□□□□□ -1.46
SLC38A1-201ENST00000398637 NBPF19A0A087WUL8 3843 aa5.91□□□□□ -1.46
SLC38A1-201ENST00000398637 ATMQ13315 3056 aa5.91□□□□□ -1.46
SLC38A1-201ENST00000398637 BOD1L1Q8NFC6 3051 aa5.9□□□□□ -1.46
SLC38A1-201ENST00000398637 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
SLC38A1-201ENST00000398637 ZZEF1O43149 2961 aa5.88□□□□□ -1.47
SLC38A1-201ENST00000398637 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
SLC38A1-201ENST00000398637 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
SLC38A1-201ENST00000398637 A6NN06 94 aa5.84□□□□□ -1.47
SLC38A1-201ENST00000398637 TENM2Q9NT68 2774 aa5.84□□□□□ -1.47
SLC38A1-201ENST00000398637 ASPMQ8IZT6 3477 aa5.84□□□□□ -1.47
SLC38A1-201ENST00000398637 VWFP04275 2813 aa5.84□□□□□ -1.48
SLC38A1-201ENST00000398637 DCHS2Q6V1P9 2916 aa5.81□□□□□ -1.48
SLC38A1-201ENST00000398637 PDZD2O15018 2839 aa5.81□□□□□ -1.48
SLC38A1-201ENST00000398637 ADGRG4Q8IZF6 3080 aa5.8□□□□□ -1.48
SLC38A1-201ENST00000398637 NBEAQ8NFP9 2946 aa5.8□□□□□ -1.48
SLC38A1-201ENST00000398637 EYSQ5T1H1 3165 aa5.79□□□□□ -1.48
SLC38A1-201ENST00000398637 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
SLC38A1-201ENST00000398637 NIPBLQ6KC79 2804 aaeCLIP5.76□□□□□ -1.495e-6■■■■■ 32.2
SLC38A1-201ENST00000398637 CELSR1Q9NYQ6 3014 aa5.75□□□□□ -1.49
SLC38A1-201ENST00000398637 ZFHX4Q86UP3 3567 aa5.71□□□□□ -1.5
SLC38A1-201ENST00000398637 ZANQ9Y493 2812 aa5.7□□□□□ -1.5
SLC38A1-201ENST00000398637 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
SLC38A1-201ENST00000398637 H0YAA0 97 aa5.69□□□□□ -1.5
SLC38A1-201ENST00000398637 MYO15AQ9UKN7 3530 aa5.67□□□□□ -1.5
SLC38A1-201ENST00000398637 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
SLC38A1-201ENST00000398637 WDFY3Q8IZQ1 3526 aa5.64□□□□□ -1.51
SLC38A1-201ENST00000398637 TGP01266 2768 aa5.62□□□□□ -1.51
SLC38A1-201ENST00000398637 DMXL1Q9Y485 3027 aa5.62□□□□□ -1.51
SLC38A1-201ENST00000398637 LOC400499M0QZD8 3231 aa5.61□□□□□ -1.51
SLC38A1-201ENST00000398637 ZFHX3Q15911 3703 aa5.59□□□□□ -1.51
SLC38A1-201ENST00000398637 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
SLC38A1-201ENST00000398637 LAMA5O15230 3695 aa5.5□□□□□ -1.53
SLC38A1-201ENST00000398637 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
SLC38A1-201ENST00000398637 DCHS1Q96JQ0 3298 aa5.47□□□□□ -1.53
SLC38A1-201ENST00000398637 FBN2P35556 2912 aa5.46□□□□□ -1.53
SLC38A1-201ENST00000398637 FBN3Q75N90 2809 aa5.43□□□□□ -1.54
SLC38A1-201ENST00000398637 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.55
SLC38A1-201ENST00000398637 RELNP78509 3460 aa5.36□□□□□ -1.55
SLC38A1-201ENST00000398637 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
SLC38A1-201ENST00000398637 COL7A1Q02388 2944 aa5.34□□□□□ -1.55
SLC38A1-201ENST00000398637 MXRA5Q9NR99 2828 aa5.33□□□□□ -1.56
SLC38A1-201ENST00000398637 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
SLC38A1-201ENST00000398637 CSMD1Q96PZ7 3565 aa5.27□□□□□ -1.57
SLC38A1-201ENST00000398637 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
SLC38A1-201ENST00000398637 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
SLC38A1-201ENST00000398637 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
SLC38A1-201ENST00000398637 DMDP11532 3685 aa5.26□□□□□ -1.57
SLC38A1-201ENST00000398637 SMG1Q96Q15 3661 aaKnown RBP5.22□□□□□ -1.57
SLC38A1-201ENST00000398637 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
SLC38A1-201ENST00000398637 HRNRQ86YZ3 2850 aaPredicted RBP5.17□□□□□ -1.58
SLC38A1-201ENST00000398637 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
SLC38A1-201ENST00000398637 MUC3AQ02505 3323 aa5.14□□□□□ -1.59
SLC38A1-201ENST00000398637 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
SLC38A1-201ENST00000398637 FBN1P35555 2871 aaKnown RBP5.08□□□□□ -1.6
SLC38A1-201ENST00000398637 CSMD2Q7Z408 3487 aa5.07□□□□□ -1.6
SLC38A1-201ENST00000398637 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
SLC38A1-201ENST00000398637 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
SLC38A1-201ENST00000398637 CUBNO60494 3623 aa4.99□□□□□ -1.61
SLC38A1-201ENST00000398637 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
SLC38A1-201ENST00000398637 SVEP1Q4LDE5 3571 aa4.97□□□□□ -1.61
SLC38A1-201ENST00000398637 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
SLC38A1-201ENST00000398637 INE1O15225 51 aa4.9□□□□□ -1.62
SLC38A1-201ENST00000398637 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
SLC38A1-201ENST00000398637 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
SLC38A1-201ENST00000398637 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
SLC38A1-201ENST00000398637 VPS13CQ709C8 3753 aa4.85□□□□□ -1.63
SLC38A1-201ENST00000398637 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
SLC38A1-201ENST00000398637 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
SLC38A1-201ENST00000398637 CSMD3Q7Z407 3707 aa4.8□□□□□ -1.64
SLC38A1-201ENST00000398637 OTOGQ6ZRI0 2925 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms