RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Gm10803Q3TZS6 135 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Rbfox3Q8BIF2 374 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Tmem50aQ9CXL1 157 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gm29666A0A087WQ99 126 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ighv1-67A0A0G2JFN9 117 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gm45785A0A1B0GT05 94 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Efnb3O35393 340 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ighv1-16A0A075B5U1 98 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Q4KKZ1 196 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Spaca3Q9D9X8 221 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ccl24Q9JKC0 119 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 AtrQ9JKK8 2635 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Igkv4-90A0A075B5L3 117 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Pglyrp3A1A547 347 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Amn1B8JKV0 258 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 1500009C09RikD3YYW9 81 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Olfr748E9Q9Z0 307 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 SbpP15501 199 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ca5aP23589 299 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 AsipQ03288 131 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ifitm2Q99J93 144 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Olfr904Q7TRC9 310 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Sh3bgrl3Q91VW3 93 aa12.19□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ang2Q64438 145 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Trav9d-1A0A075B699 112 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Olfr1369-ps1A0A140T8K7 317 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Olfr498Q8VEW2 330 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ovol1Q9WTJ2 267 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Q5BN45 167 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Nkx2-8O70584 235 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 Clec4b2Q67DU8 208 aa12.18□□□□□ -0.46
Upf1-202ENSMUST00000215817 FryE9Q8I9 3020 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gm28269A0A087WSG3 125 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ighv1-18A0A0A6YXN4 117 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Ighv5-16A0A0B4J1P4 117 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gm21874J3QNZ6 232 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Vamp8O70404 101 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Znf329Q6GQR8 522 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Trav7-4A0A075B6C1 113 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 PpyP10601 100 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Smim6Q3U0I6 56 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Trav7d-4Q5R1H9 113 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gng5Q80SZ7 68 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Tmem210Q9D2F0 147 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 Foxc2Q61850 494 aa12.17□□□□□ -0.46
Upf1-202ENSMUST00000215817 CicQ924A2 2510 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 Trav4-2A0A075B638 110 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 P01787 123 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 Itgb1bp1O35671 200 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 Vmn1r216Q8R257 298 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 Zfp950A0A0U1RQ46 609 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 Cxcl14Q9WUQ5 99 aa12.16□□□□□ -0.46
Upf1-202ENSMUST00000215817 Insl3O09107 122 aa12.15□□□□□ -0.46
Upf1-202ENSMUST00000215817 Minos1Q7TNS2 76 aa12.15□□□□□ -0.46
Upf1-202ENSMUST00000215817 Olfr1192-ps1A0A1L1SRD7 309 aa12.15□□□□□ -0.46
Upf1-202ENSMUST00000215817 E030018B13RikJ3QMS9 113 aa12.15□□□□□ -0.46
Upf1-202ENSMUST00000215817 P18528 98 aa12.15□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gm10118Q8C8J5 116 aa12.15□□□□□ -0.46
Upf1-202ENSMUST00000215817 Gm15557A6PWY0 234 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 SlpiP97430 131 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Fbxl7Q5BJ29 491 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 GrhprQ91Z53 328 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 ChtopQ9CY57 249 aaKnown RBP12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 PifoQ9D9W1 207 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 PpbpQ9EQI5 113 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 P04942 107 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Msrb3Q8BU85 253 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Tmem91Q8C581 172 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Olfr477Q8VGI6 310 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Ssbp2Q9CYZ8 361 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Tmprss5Q9ER04 455 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Ripply2Q2WG76 128 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 RprmlQ3URD2 117 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Iba57Q8CAK1 358 aaKnown RBP12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Tmem160Q9D938 188 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Pax1P09084 446 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Tmem177Q8BPE4 311 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 Fxyd1Q9Z239 92 aa12.14□□□□□ -0.47
Upf1-202ENSMUST00000215817 H2al1jA2BFR3 109 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Psg25Q497W1 475 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Pom121l2Q5SW25 972 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Trav7-5A0A0G2JFX6 112 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Thy1P01831 162 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 AcanQ61282 2132 aaKnown RBP12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Srsf2Q62093 221 aaKnown RBP12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 4933414I15RikQ9D4D5 133 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 CklfQ9DAS1 152 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 P01658 132 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Gng4P50153 75 aa12.13□□□□□ -0.47
Upf1-202ENSMUST00000215817 Gm6970F7DCP6 221 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Ash1lQ99MY8 2958 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Gm10447Q3UQ92 135 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Gm7075D3Z497 112 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Gm21983D6RFS9 131 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Il3raP26952 396 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Timp3P39876 211 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Jpt2Q6PGH2 190 aaKnown RBP12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Sec11aQ9R0P6 179 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Fxyd7P59648 80 aa12.12□□□□□ -0.47
Upf1-202ENSMUST00000215817 Nbl1Q61477 178 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms