RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ifitm2Q99J93 144 aa10.28□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Zmat5Q9CQR5 170 aa10.28□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Csmd1Q923L3 3564 aa10.28□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Zfp867E9Q2M4 473 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Prrx2Q06348 247 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Trav2Q5R1I9 109 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Arl11Q6P3A9 176 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 CnfnQ6PCW6 111 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Odf3l1Q810P2 275 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Leprotl1Q9CQ74 131 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Rbm7Q9CQT2 265 aaKnown RBP10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Nat6Q9R123 314 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 IcosQ9WVS0 200 aa10.27□□□□□ -0.76
Pdlim5-208ENSMUST00000196220 Sptbn1Q62261 2363 aaKnown RBP10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Cmya5Q70KF4 3739 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ighv1-58A0A075B5W9 117 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Rtl10D3YWW5 146 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 P01643 108 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ang2Q64438 145 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Olfr1195Q8VG21 308 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Borcs7Q9CRC6 105 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 GlmpQ9JHJ3 404 aa10.27□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Prrc2cQ3TLH4 2846 aaKnown RBP10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Col6a4A2AX52 2309 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Trav7-5A0A0G2JFX6 112 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Fabp4P04117 132 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 TbpP29037 316 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 6030452D12RikQ8CD33 222 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Rasl10aQ8K5A4 203 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Arl3Q9WUL7 182 aa10.26□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 1810011H11RikE9PVZ2 95 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Gm20517G3UVU6 152 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Gm10226O88253 85 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ccl6P27784 116 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Olfr1209Q3SXJ3 310 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Hspe1Q64433 102 aaKnown RBP10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Prima1Q810F0 153 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Tmem129Q8K304 362 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Trpt1Q8K3A2 249 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 RnasekQ8K3C0 98 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Olfr1431Q8VF59 312 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Olfr365Q8VFT2 312 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Znhit3Q9CQK1 151 aa10.25□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 1700067P10RikG3X8U2 183 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Pmp2P24526 132 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Bri3P28662 125 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Hist2h2beQ64524 126 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Fam19a2Q7TPG7 131 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Vmn1r202Q8R259 302 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Olfr477Q8VGI6 310 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Olfr1262Q8VGN2 304 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Gtsf1lQ9CWD0 151 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Bex1Q9R224 128 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Prpf8Q99PV0 2335 aaKnown RBP10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Trav12-3A0A075B648 115 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Trav21-dv12A0A075B6C4 109 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Tcf21O35437 179 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 P04219 140 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Dpm3Q9D1Q4 92 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Q9D7E4 109 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Q9DAB9 146 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Plpp2Q9DAX2 276 aa10.24□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Med13lQ6JPI3 2207 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Usp24B1AY13 2617 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ighv1-22A0A075B5U7 117 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ighv9-1A0A0B4J1P3 117 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Gm10036E9PYL9 178 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Shisal1Q0VBP7 198 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 7420426K07RikQ3UX66 186 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Trdv2-2Q5R1A4 116 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Vsig8Q6P3A4 417 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Psmb11Q8BG41 302 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Uqcc3Q8K2T4 89 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ormdl3Q9CPZ6 153 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 RhohQ9D3G9 191 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Hcfc2Q9D968 241 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Wfdc15bQ9JHY4 80 aa10.23□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ighv1-23A0A0A6YVW3 117 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Tstd1E9PY03 133 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 PlaurP35456 327 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Prickle3Q80VL3 624 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Uqcrfs1Q9CR68 274 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Shisa9Q9CZN4 424 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Lelp1Q9DAE3 120 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ube2l6Q9QZU9 153 aa10.22□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ighv1-16A0A075B5U1 98 aa10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Foxc2Q61850 494 aa10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Zfp248Q640N4 576 aa10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 UrahQ9CRB3 118 aa10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Mrpl53Q9D1H8 118 aaKnown RBP10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Sdk1Q3UH53 2193 aa10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Ptpn13Q64512 2453 aa10.21□□□□□ -0.77
Pdlim5-208ENSMUST00000196220 Edn2P22389 175 aa10.21□□□□□ -0.78
Pdlim5-208ENSMUST00000196220 BlcapP62951 87 aa10.21□□□□□ -0.78
Pdlim5-208ENSMUST00000196220 Ndufa4l2Q4FZG9 87 aa10.21□□□□□ -0.78
Pdlim5-208ENSMUST00000196220 Cnn3Q9DAW9 330 aaKnown RBP10.21□□□□□ -0.78
Pdlim5-208ENSMUST00000196220 Gm6904E9PVF1 202 aa10.2□□□□□ -0.78
Pdlim5-208ENSMUST00000196220 Psmg4P0C7N9 123 aa10.2□□□□□ -0.78
Pdlim5-208ENSMUST00000196220 Gm10775Q3V290 127 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms