RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm10334Q792Y8 246 aa16.04■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 ManbalQ9D8X0 85 aa16.04■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Dynlrb2Q9DAJ5 96 aa16.04■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Olfr1293-psA0A1L1SVB5 326 aa16.03■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Olfr403Q7TRX2 313 aa16.03■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Tm2d1Q99MB3 208 aa16.03■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Krtap26-1Q9D7N2 215 aa16.03■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Lgals1P16045 135 aaKnown RBP16.02■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Pfn1P62962 140 aa16.02■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Smim9Q3V0X1 137 aa16.02■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Fbxl7Q5BJ29 491 aa16.02■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Ifi27Q8C6G0 260 aa16.02■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Lyzl1Q9CPX3 148 aa16.02■□□□□ 0.16
Ccdc88a-202ENSMUST00000109477 Olfr556E9Q549 324 aa16.02■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Cd81P35762 236 aa16.02■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Rps10P63325 165 aaKnown RBP16.02■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Vmn1r63Q9EPT1 300 aa16.02■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Gm4565A0A140LJ87 301 aa16.01■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Zfp825A0A1Y7VK00 292 aa16.01■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Klf12O35738 402 aa16.01■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Saa3P04918 122 aa16.01■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Cbln1Q9R171 193 aa16.01■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Igkv4-69A0A0B4J1I6 116 aa16■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Cldn34c4A2ANA3 212 aa16■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 AplnrQ9WV08 377 aa16■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Tex15F8VPN2 2785 aa16■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Trav7-4A0A075B6C1 113 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Rnf212F6TQD1 307 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Itgb1bp1O35671 200 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Q3UUX7 111 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Trav7d-4Q5R1H9 113 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Olfr481Q8VGI5 312 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Dazap1Q9JII5 406 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Trbv1A0A0B4J1G7 116 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 A930009A15RikG3UYI6 118 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 DdtO35215 118 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Znf239P24399 201 aa15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Btf3l4Q9CQH7 158 aaKnown RBP15.99■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Gm33815A0A087WNV3 176 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Gm29644A0A087WPG2 191 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Twist1P26687 206 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Cd69P37217 199 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Runx1Q03347 451 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Slc17a2Q5SZA1 478 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Smug1Q6P5C5 279 aa15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Prss3Q792Z0 246 aaKnown RBP15.98■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Stab1Q8R4Y4 2571 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 BC100530Q497J0 97 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Ang5Q5GAN1 145 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Fxyd4Q9D2W0 88 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Col6a5A6H584 2640 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Igkv20-101-2A0A0G2JDU3 113 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Odf1Q61999 247 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Jpt2Q6PGH2 190 aaKnown RBP15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Wfdc15aQ8BH89 80 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Q9DAB9 146 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 BlnkQ9QUN3 457 aa15.97■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Igkv4-81A0A0G2JEY5 119 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Vmn1r158G3UY92 307 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Rab5bP61021 215 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Ceacam12Q3UKP4 300 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Ldlrad2Q3V0V0 142 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Trp53rkaQ5U452 244 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Olfr509Q8VF20 321 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 Tp53rkQ99PW4 244 aa15.96■□□□□ 0.15
Ccdc88a-202ENSMUST00000109477 NipblQ6KCD5 2798 aaKnown RBP15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Igsf10Q3V1M1 2594 aa15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv1-82A0A0G2JEU7 117 aa15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Gstp1P19157 210 aa15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Slc35b1P97858 322 aa15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Olfr1380Q7TQT5 311 aa15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Fam210aQ8BGY7 273 aa15.95■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv1-64A0A075B5X3 117 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Tctex1d1Q9D5I4 173 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Avpi1Q9D7H4 142 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Them7Q9DCP4 223 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Trav6d-7A0A075B6B0 112 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv1-12A0A0A6YXJ9 117 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Olfr1116E9PXB8 307 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Gm15056F6ZR08 88 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Gm21874J3QNZ6 232 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Tnfrsf9P20334 256 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Olfr1381Q7TQT4 311 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Gm5105Q8C6Y9 112 aa15.94■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv6-3A0A075B5T2 118 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Trav7n-4A0A075B620 113 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 P01750 117 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 PigyP0C1P0 71 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Rhox4dQ2MDG0 205 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Olfr982Q8VGB3 321 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Tmed6Q9CQG0 239 aa15.93■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv1-9A0A0A6YW37 117 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Igkv4-70A0A0B4J1I5 116 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Rhox7bA6PW38 321 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Gm2564F6Z9S8 108 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Krtap24-1G3X9A2 248 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ccl19O70460 108 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 P01739 132 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv1-62-3P01754 117 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Psmb8P28063 276 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms