RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Gsx1P31315 261 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 Ptprz1B9EKR1 2312 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 Gm12845A0A0N4SUM5 588 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 CrxO54751 299 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 Ighv1-37A0A0A6YW32 117 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 Ly6lH3BJG9 140 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 Gkn1Q9CR36 201 aa15.11■□□□□ 0.01
Upf1-201ENSMUST00000075666 Ighv8-8A0A0A6YXQ0 119 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Gm20517G3UVU6 152 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Rbfox3Q8BIF2 374 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Zc2hc1aQ8BJH1 324 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Nckap5E9QAE1 1909 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 KprpB2RUR4 657 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Sigmar1O55242 223 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Tpsab1Q02844 273 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 P01736 120 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Oosp2Q4FZG8 168 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Prelid3aQ8VE85 172 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 4933414I15RikQ9D4D5 133 aa15.1■□□□□ 0.01
Upf1-201ENSMUST00000075666 Igkv6-15A0A140T8M5 115 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Ttc9cQ810A3 171 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Wfdc2Q9DAU7 174 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Gm5819E9PZ96 154 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 MdfiP70331 251 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Hist1h1tQ07133 208 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Dtx1Q61010 627 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Iah1Q9DB29 249 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Lynx1P0DP60 116 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Tal2Q62282 108 aa15.09■□□□□ 0.01
Upf1-201ENSMUST00000075666 Dopey2Q3UHQ6 2295 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Cd59aO55186 123 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 NpsP0C0P8 89 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Cdkn1aP39689 159 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 P01659 112 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Mllt11P97783 90 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Atp6v0bQ91V37 205 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Igkv19-93A0A0G2JFZ3 115 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Gm17732E9Q5I2 61 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Loxl1P97873 607 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Snrnp40Q6PE01 358 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Gm5105Q8C6Y9 112 aa15.08■□□□□ 0
Upf1-201ENSMUST00000075666 Fbxl15Q91W61 300 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Q9CQM1 111 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 3110021N24RikJ3QMN2 152 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Sap30O88574 220 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Obox1Q9D350 204 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Hrct1Q9D6B9 109 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 H2-DMb1P35737 261 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Olfr322Q5NCC8 327 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Dmrt3Q80WT2 476 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Fam208bQ5DTT3 2382 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Igkv4-91A0A075B5L2 119 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Avpi1Q9D7H4 142 aa15.07■□□□□ 0
Upf1-201ENSMUST00000075666 Trav14-2A0A075B694 121 aa15.06■□□□□ 0
Upf1-201ENSMUST00000075666 Ighv1-69A0A0G2JFS5 117 aa15.06■□□□□ 0
Upf1-201ENSMUST00000075666 C330021F23RikQ8C7T0 141 aa15.06■□□□□ 0
Upf1-201ENSMUST00000075666 Ncor1Q60974 2453 aa15.06■□□□□ 0
Upf1-201ENSMUST00000075666 Dnal4Q9DCM4 105 aa15.06■□□□□ 0
Upf1-201ENSMUST00000075666 Sdk2Q6V4S5 2176 aa15.06■□□□□ 0
Upf1-201ENSMUST00000075666 Gm33815A0A087WNV3 176 aa15.05■□□□□ 0
Upf1-201ENSMUST00000075666 Mlst8Q9DCJ1 326 aa15.05■□□□□ 0
Upf1-201ENSMUST00000075666 1700067P10RikG3X8U2 183 aa15.05■□□□□ 0
Upf1-201ENSMUST00000075666 OtosQ8R448 89 aa15.05■□□□□ 0
Upf1-201ENSMUST00000075666 1700084M14RikB1AT01 78 aa15.05■□□□□ -0
Upf1-201ENSMUST00000075666 P04940 107 aa15.05■□□□□ -0
Upf1-201ENSMUST00000075666 P04941 107 aa15.05■□□□□ -0
Upf1-201ENSMUST00000075666 Q4KKZ1 196 aa15.05■□□□□ -0
Upf1-201ENSMUST00000075666 Rbx1P62878 108 aa15.05■□□□□ -0
Upf1-201ENSMUST00000075666 Tnfrsf23Q9ER63 176 aa15.05■□□□□ -0
Upf1-201ENSMUST00000075666 3110082J24RikF6Z6Z2 108 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Adrb3P25962 400 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Pygo1Q9D0P5 417 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Prpf8Q99PV0 2335 aaKnown RBP15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Spry4Q9WTP2 300 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Brd3osA0A1B0GRB6 84 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Higd1aQ9JLR9 95 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 P01724 129 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 P01727 129 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 NpyP57774 97 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Sumo2P61957 95 aaKnown RBP15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Tmem88bQ3TYP4 173 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Cops9Q3U898 57 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Zfp248Q640N4 576 aa15.04■□□□□ -0
Upf1-201ENSMUST00000075666 Snrpd3P62320 126 aaKnown RBP15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Q08AU9 97 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Pcnx2Q5DU28 2122 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Plxnb1Q8CJH3 2119 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Ighv1-81A0A075B5Y4 117 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Tcrg-C3L7N479 172 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 P03985 172 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Wt1P22561 449 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Gm94Q3V2D2 93 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Fam110aQ8R184 296 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 4930544G11RikQ9CR99 193 aa15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Tet2Q4JK59 1912 aaKnown RBP15.03■□□□□ -0
Upf1-201ENSMUST00000075666 Gm9920D3YVZ2 140 aa15.02■□□□□ -0
Upf1-201ENSMUST00000075666 Ccl12Q62401 104 aa15.02■□□□□ -0
Upf1-201ENSMUST00000075666 Fancd2osQ9D4K4 178 aa15.02■□□□□ -0
Upf1-201ENSMUST00000075666 HelzQ6DFV5 1964 aaKnown RBP15.02■□□□□ -0
Upf1-201ENSMUST00000075666 P01649 108 aa15.02■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 82.1 ms