RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Tmem116A0A0G2JGD3 401 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Defa-rs12P50716 91 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 D630044L22RikQ8C701 164 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Npc2Q9Z0J0 149 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Ighv1-37A0A0A6YW32 117 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Tmem136Q3TYE7 245 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Defa24Q5G865 93 aa13.95□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Shisal2aA2A9G7 189 aa13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Zcchc24B2RVL6 241 aaKnown RBP13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Omt2bD3YX29 119 aa13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Sh2d6Q9D413 297 aa13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Tpsg1Q9QUL7 311 aa13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 AtrxQ61687 2476 aaKnown RBP13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Trav14-2A0A075B694 121 aa13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Prrx2Q06348 247 aa13.94□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Vwc2lQ505H4 222 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Trav6d-4Q5R1I0 115 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Tal2Q62282 108 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Olfr904Q7TRC9 310 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Fhl4Q8CDC8 279 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Tmem210Q9D2F0 147 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Gm17660B9UIU9 90 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 P01741 114 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Cks1bP61025 79 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Rasl10aQ8K5A4 203 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 CklfQ9DAS1 152 aa13.93□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Ssbp4Q3U4B1 363 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Gm94Q3V2D2 93 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Dusp14Q9JLY7 198 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Trav8-1A0A075B641 109 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Sertad4A7DTG3 377 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Zfp493E9Q1L8 384 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 P01756 117 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 P01757 117 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 AdipoqQ60994 247 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Il22ra1Q80XZ4 581 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 OtorQ9JIE3 128 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Ccl8Q9Z121 97 aa13.92□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Trbv31A0A075B5J5 111 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Srsf1Q6PDM2 248 aaKnown RBP13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Cryba4Q9JJV0 196 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Clec5aQ9R007 190 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 PirtQ8BFY0 135 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Rnf185Q91YT2 192 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Fmc1Q9CR13 113 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Cysrt1Q9D1E4 142 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Csmd1Q923L3 3564 aa13.91□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 KprpB2RUR4 657 aa13.9□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Mex3bQ69Z36 601 aaKnown RBP13.9□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Gm14137Q8CE97 175 aa13.9□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Ovol1Q9WTJ2 267 aa13.9□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 TectaO08523 2155 aa13.9□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 C330021F23RikQ8C7T0 141 aa13.9□□□□□ -0.18
Sqstm1-201ENSMUST00000015981 Ighv7-3A0A075B5R2 120 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Iglc1A0A0G2JE99 106 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Hbb-bsA8DUK4 147 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Hbb-b1P02088 147 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 7420426K07RikQ3UX66 186 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Defb28Q3V2L0 89 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Ttc9cQ810A3 171 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 P01843 105 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Dlx6P70397 175 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Lypd1Q8BLC3 141 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Tmem178aQ9CZ16 297 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 EppinQ9DA01 134 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Arfgef3Q3UGY8 2170 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Abca1P41233 2261 aa13.89□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Gm28269A0A087WSG3 125 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 1700084M14RikB1AT01 78 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Myod1P10085 318 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Cd24P24807 76 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Ripply2Q2WG76 128 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Spink13Q3UTS8 97 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Gm9958Q8C9U4 106 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Tctex1d4Q8CDY7 219 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 OtosQ8R448 89 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Med12A2AGH6 2190 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Pde6hP61249 83 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 NpbQ8K4P1 119 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Errfi1Q99JZ7 461 aa13.88□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Gm33815A0A087WNV3 176 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Gm29644A0A087WPG2 191 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Tcl1b4P56844 120 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Tcrg-C1A0A075B5Z0 172 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Trav7-5A0A0G2JFX6 112 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Gsx1P31315 261 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Rbmxl2Q9DAE2 385 aaKnown RBP13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 KalrnA2CG49 2964 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Ndufa1O35683 70 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 P01801 115 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Znf239P24399 201 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Ang4Q3TMQ6 144 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Znf575Q3TXZ1 239 aa13.87□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Hoxc12Q8K5B8 280 aa13.86□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 A730046J19RikA0A1B0GSN8 89 aa13.86□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 BptfA2A654 3036 aaKnown RBP13.86□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 P01794 123 aa13.86□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 SvipQ3UZP4 77 aa13.86□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 CnfnQ6PCW6 111 aa13.86□□□□□ -0.19
Sqstm1-201ENSMUST00000015981 Rbfox3Q8BIF2 374 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms