RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Prune2Q52KR3 3084 aa10.14□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv1-22A0A075B5U7 117 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv1-81A0A075B5Y4 117 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Gm28269A0A087WSG3 125 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Trav7-5A0A0G2JFX6 112 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 PlnP61014 52 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Olfr745Q7TRL9 328 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 BC106179Q8C9L1 186 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Trav16d-dv11A0A075B617 117 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Gm4763Q8CFJ5 196 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Tax1bp3Q9DBG9 124 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Xlr5cQ9JJR2 179 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 IcosQ9WVS0 200 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Trav19A0A0B4J1K4 119 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Insl3O09107 122 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 PolP10400 120 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 AvpP35455 168 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv5-6A0A075B5Q0 117 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Mtatp8P03930 67 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Cd24P24807 76 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Spock3Q8BKV0 436 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Cend1Q9JKC6 149 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Arhgef17Q80U35 2057 aa10.13□□□□□ -0.79
Msh6-201ENSMUST00000005503 Psmg4P0C7N9 123 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 Muc15Q8C6Z1 331 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 Anapc13Q8R034 74 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 C330021F23RikQ8C7T0 141 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 Znhit3Q9CQK1 151 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 Gtsf1lQ9CWD0 151 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 CstadQ9D245 104 aa10.12□□□□□ -0.79
Msh6-201ENSMUST00000005503 Trav6d-7A0A075B6B0 112 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv8-8A0A0A6YXQ0 119 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 MycbQ6P8Z1 170 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Gm11444F6QMA6 170 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 P04940 107 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 P04941 107 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Plscr4P58196 326 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Tmem129Q8K304 362 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 NpbQ8K4P1 119 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Mrpl36Q99N90 102 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Oxld1Q9CR10 201 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Gkn1Q9CR36 201 aa10.11□□□□□ -0.79
Msh6-201ENSMUST00000005503 Trav6n-6A0A075B6B2 114 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Gm35549A0A0N4SUS7 141 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Tmem88bQ3TYP4 173 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Pear1Q8VIK5 1034 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Pkd1l2Q7TN88 2461 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv1-39A0A075B5V5 117 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Scgb1b24B1B0N6 92 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Bak1O08734 209 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 P01736 120 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv1-62-2A0A0A6YXZ4 119 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Srsf1Q6PDM2 248 aaKnown RBP10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Klhdc1Q80YG3 406 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Dmrtc2Q8CGW9 370 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 OtorQ9JIE3 128 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Wdr90Q6ZPG2 1874 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Igkv4-90A0A075B5L3 117 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Tcrg-V6A0A075B5Y8 134 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 Pygo2Q80V76 405 aa10.1□□□□□ -0.79
Msh6-201ENSMUST00000005503 AcacbE9Q4Z2 2448 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Vps13aQ5H8C4 3166 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Tcf20Q9EPQ8 1987 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Q4KKZ1 196 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Snrnp40Q6PE01 358 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Slc25a16Q8C0K5 332 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Chac1Q8R3J5 223 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Ighv1-31A0A0A6YWK5 117 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Igkv19-93A0A0G2JFZ3 115 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Obp2bA2BHR0 176 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Crip1P63254 77 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Them7Q9DCP4 223 aa10.09□□□□□ -0.79
Msh6-201ENSMUST00000005503 Trav6-6A0A075B603 114 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Oosp2Q4FZG8 168 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Ovol2Q8CIV7 274 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Trav14n-2A0A0G2JDF5 121 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Gm1553Q66VB7 94 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Olfr975Q8VG91 310 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Plekhb2Q9QZC7 221 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 Mlst8Q9DCJ1 326 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 1110002E22RikE0CYV9 1786 aa10.08□□□□□ -0.8
Msh6-201ENSMUST00000005503 CntfrO88507 372 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 P01723 117 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 P0C1Z5 52 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Tmem95P0DJF3 176 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Gm9949Q8C9F4 104 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Cdh23Q99PF4 3354 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Trav14d-1A0A075B6B1 121 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Vamp8O70404 101 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Cd69P37217 199 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Olfr477Q8VGI6 310 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Znf672Q99LH4 468 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 P04942 107 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Svs5P30933 122 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 NdpP48744 131 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Lypd6Q8BPP5 171 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 P01794 123 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Lypd1Q8BLC3 141 aa10.07□□□□□ -0.8
Msh6-201ENSMUST00000005503 Ighv1-55A0A075B5W6 117 aa10.06□□□□□ -0.8
Msh6-201ENSMUST00000005503 Gm17359A0A0G2JEB7 487 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 121.9 ms