RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 DEFB114Q30KQ6 69 aa1.06□□□□□ -2.24
FCF1-207ENST00000554973 LMO7Q8WWI1 1683 aa1.06□□□□□ -2.24
FCF1-207ENST00000554973 ATRQ13535 2644 aa1.05□□□□□ -2.24
FCF1-207ENST00000554973 U3KQA8 63 aa1.05□□□□□ -2.24
FCF1-207ENST00000554973 FAM208AQ9UK61 1670 aaKnown RBP1.04□□□□□ -2.24
FCF1-207ENST00000554973 BPTFQ12830 3046 aa1.04□□□□□ -2.24
FCF1-207ENST00000554973 ETDCA0A1B0GVM5 59 aa1.04□□□□□ -2.24
FCF1-207ENST00000554973 SMIM5Q71RC9 77 aa1.04□□□□□ -2.24
FCF1-207ENST00000554973 NAV2Q8IVL1 2488 aa1.04□□□□□ -2.24
FCF1-207ENST00000554973 TENM4Q6N022 2769 aa1.03□□□□□ -2.24
FCF1-207ENST00000554973 LINC00158P58513 81 aa1.03□□□□□ -2.24
FCF1-207ENST00000554973 PCNTO95613 3336 aa1.03□□□□□ -2.24
FCF1-207ENST00000554973 TOGARAM1Q9Y4F4 1720 aa1.03□□□□□ -2.24
FCF1-207ENST00000554973 UNC79Q9P2D8 2635 aa1.02□□□□□ -2.25
FCF1-207ENST00000554973 USP24Q9UPU5 2620 aa1.02□□□□□ -2.25
FCF1-207ENST00000554973 CEP350Q5VT06 3117 aa1.02□□□□□ -2.25
FCF1-207ENST00000554973 LY75O60449 1722 aa1.01□□□□□ -2.25
FCF1-207ENST00000554973 PTPN13Q12923 2485 aa1.01□□□□□ -2.25
FCF1-207ENST00000554973 HTTP42858 3142 aa1□□□□□ -2.25
FCF1-207ENST00000554973 BRCA2P51587 3418 aa1□□□□□ -2.25
FCF1-207ENST00000554973 H0YAA0 97 aa1□□□□□ -2.25
FCF1-207ENST00000554973 PDE4DIPQ5VU43 2346 aa0.99□□□□□ -2.25
FCF1-207ENST00000554973 CENPFP49454 3210 aa0.99□□□□□ -2.25
FCF1-207ENST00000554973 OTOGQ6ZRI0 2925 aa0.98□□□□□ -2.25
FCF1-207ENST00000554973 BSNQ9UPA5 3926 aa0.97□□□□□ -2.25
FCF1-207ENST00000554973 MKI67P46013 3256 aaKnown RBP0.97□□□□□ -2.25
FCF1-207ENST00000554973 ABCA2Q9BZC7 2435 aa0.97□□□□□ -2.25
FCF1-207ENST00000554973 LAMA2P24043 3122 aaKnown RBP0.97□□□□□ -2.25
FCF1-207ENST00000554973 CHD8Q9HCK8 2581 aa0.97□□□□□ -2.25
FCF1-207ENST00000554973 SPTBN5Q9NRC6 3674 aaKnown RBP0.96□□□□□ -2.26
FCF1-207ENST00000554973 DUOX1Q9NRD9 1551 aa0.96□□□□□ -2.26
FCF1-207ENST00000554973 ANKRD36CQ5JPF3 1778 aa0.96□□□□□ -2.26
FCF1-207ENST00000554973 DDX60Q8IY21 1712 aaKnown RBP0.96□□□□□ -2.26
FCF1-207ENST00000554973 CRIP1P50238 77 aa0.96□□□□□ -2.26
FCF1-207ENST00000554973 DNAH12Q6ZR08 3092 aa0.96□□□□□ -2.26
FCF1-207ENST00000554973 RANBP2P49792 3224 aaKnown RBP0.96□□□□□ -2.26
FCF1-207ENST00000554973 A0A1B0GUL6 1792 aa0.96□□□□□ -2.26
FCF1-207ENST00000554973 LAMA3Q16787 3333 aa0.95□□□□□ -2.26
FCF1-207ENST00000554973 LYNX1G3V0Z9 82 aa0.95□□□□□ -2.26
FCF1-207ENST00000554973 SZT2Q5T011 3432 aa0.95□□□□□ -2.26
FCF1-207ENST00000554973 CDH23Q9H251 3354 aa0.94□□□□□ -2.26
FCF1-207ENST00000554973 XIRP2A4UGR9 3374 aa0.94□□□□□ -2.26
FCF1-207ENST00000554973 EYSQ5T1H1 3165 aa0.94□□□□□ -2.26
FCF1-207ENST00000554973 FAT2Q9NYQ8 4349 aa0.93□□□□□ -2.26
FCF1-207ENST00000554973 MUC3AQ02505 3323 aa0.93□□□□□ -2.26
FCF1-207ENST00000554973 VCANP13611 3396 aa0.93□□□□□ -2.26
FCF1-207ENST00000554973 PRUNE2Q8WUY3 3088 aa0.92□□□□□ -2.26
FCF1-207ENST00000554973 UNC80Q8N2C7 3258 aa0.92□□□□□ -2.26
FCF1-207ENST00000554973 TNRC18O15417 2968 aaPredicted RBP0.92□□□□□ -2.26
FCF1-207ENST00000554973 CHD7Q9P2D1 2997 aa0.92□□□□□ -2.26
FCF1-207ENST00000554973 DMDP11532 3685 aa0.92□□□□□ -2.26
FCF1-207ENST00000554973 A0A0C4DFX4 3053 aa0.92□□□□□ -2.26
FCF1-207ENST00000554973 PRKDCP78527 4128 aaKnown RBP0.91□□□□□ -2.26
FCF1-207ENST00000554973 TRANK1O15050 2925 aa0.91□□□□□ -2.26
FCF1-207ENST00000554973 NCOR2Q9Y618 2525 aa0.91□□□□□ -2.26
FCF1-207ENST00000554973 HUWE1Q7Z6Z7 4374 aaKnown RBP0.91□□□□□ -2.26
FCF1-207ENST00000554973 EP300Q09472 2414 aaPredicted RBP0.9□□□□□ -2.26
FCF1-207ENST00000554973 MYO15AQ9UKN7 3530 aa0.9□□□□□ -2.26
FCF1-207ENST00000554973 COL6A3P12111 3177 aa0.9□□□□□ -2.26
FCF1-207ENST00000554973 TNXBP22105 4242 aa0.9□□□□□ -2.26
FCF1-207ENST00000554973 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
FCF1-207ENST00000554973 LOC730098B7Z3J9 87 aa0.9□□□□□ -2.27
FCF1-207ENST00000554973 LRP1Q07954 4544 aaKnown RBP0.9□□□□□ -2.27
FCF1-207ENST00000554973 DNAH14Q0VDD8 3507 aa0.89□□□□□ -2.27
FCF1-207ENST00000554973 K7EMI3 77 aa0.89□□□□□ -2.27
FCF1-207ENST00000554973 FRYLO94915 3013 aa0.89□□□□□ -2.27
FCF1-207ENST00000554973 TRIOO75962 3097 aa0.89□□□□□ -2.27
FCF1-207ENST00000554973 WDR87Q6ZQQ6 2873 aa0.89□□□□□ -2.27
FCF1-207ENST00000554973 UBR5O95071 2799 aaPredicted RBP0.89□□□□□ -2.27
FCF1-207ENST00000554973 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 VPS13AQ96RL7 3174 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 USP34Q70CQ2 3546 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 WDFY3Q8IZQ1 3526 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 WDFY4Q6ZS81 3184 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 C5orf42Q9H799 3197 aa0.88□□□□□ -2.27
FCF1-207ENST00000554973 ASPMQ8IZT6 3477 aa0.87□□□□□ -2.27
FCF1-207ENST00000554973 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
FCF1-207ENST00000554973 CFAP54Q96N23 3096 aa0.87□□□□□ -2.27
FCF1-207ENST00000554973 HIVEP3Q5T1R4 2406 aa0.86□□□□□ -2.27
FCF1-207ENST00000554973 SPENQ96T58 3664 aaKnown RBP0.86□□□□□ -2.27
FCF1-207ENST00000554973 SPEGQ15772 3267 aa0.86□□□□□ -2.27
FCF1-207ENST00000554973 IAPPP10997 89 aa0.86□□□□□ -2.27
FCF1-207ENST00000554973 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
FCF1-207ENST00000554973 LAMA1P25391 3075 aa0.86□□□□□ -2.27
FCF1-207ENST00000554973 LAMA5O15230 3695 aa0.85□□□□□ -2.27
FCF1-207ENST00000554973 NCBP2-AS2Q69YL0 99 aa0.85□□□□□ -2.27
FCF1-207ENST00000554973 ZFHX4Q86UP3 3567 aa0.85□□□□□ -2.27
FCF1-207ENST00000554973 CFAP47Q6ZTR5 3102 aa0.85□□□□□ -2.27
FCF1-207ENST00000554973 FREM2Q5SZK8 3169 aa0.85□□□□□ -2.27
FCF1-207ENST00000554973 CEP290O15078 2479 aa0.84□□□□□ -2.27
FCF1-207ENST00000554973 DMXL1Q9Y485 3027 aa0.84□□□□□ -2.27
FCF1-207ENST00000554973 M0R2T5 61 aa0.84□□□□□ -2.27
FCF1-207ENST00000554973 SERF2P84101 59 aa0.84□□□□□ -2.27
FCF1-207ENST00000554973 SMG1Q96Q15 3661 aaKnown RBP0.84□□□□□ -2.28
FCF1-207ENST00000554973 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.28
FCF1-207ENST00000554973 IGSF10Q6WRI0 2623 aa0.84□□□□□ -2.28
FCF1-207ENST00000554973 PKD1L1Q8TDX9 2849 aa0.83□□□□□ -2.28
FCF1-207ENST00000554973 LOC400499M0QZD8 3231 aa0.83□□□□□ -2.28
FCF1-207ENST00000554973 TENM3Q9P273 2699 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms