RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
FCF1-207ENST00000554973 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
FCF1-207ENST00000554973 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
FCF1-207ENST00000554973 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
FCF1-207ENST00000554973 FOXD1Q16676 465 aa18.14■□□□□ 0.49
FCF1-207ENST00000554973 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
FCF1-207ENST00000554973 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
FCF1-207ENST00000554973 MSH5O43196 834 aa17.02■□□□□ 0.32
FCF1-207ENST00000554973 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
FCF1-207ENST00000554973 ADRA2BP18089 450 aa17■□□□□ 0.31
FCF1-207ENST00000554973 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
FCF1-207ENST00000554973 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
FCF1-207ENST00000554973 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
FCF1-207ENST00000554973 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
FCF1-207ENST00000554973 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
FCF1-207ENST00000554973 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
FCF1-207ENST00000554973 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
FCF1-207ENST00000554973 KCNA4P22459 653 aa15.07■□□□□ 0
FCF1-207ENST00000554973 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
FCF1-207ENST00000554973 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
FCF1-207ENST00000554973 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
FCF1-207ENST00000554973 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
FCF1-207ENST00000554973 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
FCF1-207ENST00000554973 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
FCF1-207ENST00000554973 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
FCF1-207ENST00000554973 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
FCF1-207ENST00000554973 RNF39Q9H2S5 420 aa14.47□□□□□ -0.09
FCF1-207ENST00000554973 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
FCF1-207ENST00000554973 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
FCF1-207ENST00000554973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
FCF1-207ENST00000554973 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
FCF1-207ENST00000554973 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
FCF1-207ENST00000554973 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
FCF1-207ENST00000554973 ZBTB22O15209 634 aa13.88□□□□□ -0.19
FCF1-207ENST00000554973 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
FCF1-207ENST00000554973 RTN4Q9NQC3 1192 aaKnown RBP13.87□□□□□ -0.19
FCF1-207ENST00000554973 CAPN15O75808 1086 aa13.76□□□□□ -0.21
FCF1-207ENST00000554973 APLP2Q06481 763 aa13.73□□□□□ -0.21
FCF1-207ENST00000554973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
FCF1-207ENST00000554973 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
FCF1-207ENST00000554973 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
FCF1-207ENST00000554973 SAMD1Q6SPF0 538 aaPredicted RBP13.61□□□□□ -0.23
FCF1-207ENST00000554973 DSG3P32926 999 aa13.6□□□□□ -0.23
FCF1-207ENST00000554973 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
FCF1-207ENST00000554973 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
FCF1-207ENST00000554973 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
FCF1-207ENST00000554973 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
FCF1-207ENST00000554973 ABCB7O75027 752 aa13.41□□□□□ -0.26
FCF1-207ENST00000554973 POLA2Q14181 598 aa13.2□□□□□ -0.3
FCF1-207ENST00000554973 FKBP8Q14318 412 aa13.19□□□□□ -0.3
FCF1-207ENST00000554973 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
FCF1-207ENST00000554973 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
FCF1-207ENST00000554973 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
FCF1-207ENST00000554973 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
FCF1-207ENST00000554973 POTEHQ6S545 545 aa12.86□□□□□ -0.35
FCF1-207ENST00000554973 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
FCF1-207ENST00000554973 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
FCF1-207ENST00000554973 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
FCF1-207ENST00000554973 FBLN2P98095 1184 aa12.74□□□□□ -0.37
FCF1-207ENST00000554973 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
FCF1-207ENST00000554973 BCANQ96GW7 911 aa12.62□□□□□ -0.39
FCF1-207ENST00000554973 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
FCF1-207ENST00000554973 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
FCF1-207ENST00000554973 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
FCF1-207ENST00000554973 REM2Q8IYK8 340 aaPredicted RBP12.59□□□□□ -0.39
FCF1-207ENST00000554973 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
FCF1-207ENST00000554973 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
FCF1-207ENST00000554973 PRKCSHP14314 528 aaPredicted RBP12.52□□□□□ -0.41
FCF1-207ENST00000554973 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
FCF1-207ENST00000554973 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
FCF1-207ENST00000554973 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
FCF1-207ENST00000554973 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
FCF1-207ENST00000554973 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
FCF1-207ENST00000554973 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
FCF1-207ENST00000554973 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
FCF1-207ENST00000554973 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
FCF1-207ENST00000554973 DCAF8L2P0C7V8 631 aa12.32□□□□□ -0.44
FCF1-207ENST00000554973 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
FCF1-207ENST00000554973 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
FCF1-207ENST00000554973 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
FCF1-207ENST00000554973 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
FCF1-207ENST00000554973 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
FCF1-207ENST00000554973 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
FCF1-207ENST00000554973 PKD2Q13563 968 aa12.17□□□□□ -0.46
FCF1-207ENST00000554973 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
FCF1-207ENST00000554973 PROM2Q8N271 834 aa12.17□□□□□ -0.46
FCF1-207ENST00000554973 HAX1O00165 279 aa12.16□□□□□ -0.46
FCF1-207ENST00000554973 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
FCF1-207ENST00000554973 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
FCF1-207ENST00000554973 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
FCF1-207ENST00000554973 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
FCF1-207ENST00000554973 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
FCF1-207ENST00000554973 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
FCF1-207ENST00000554973 PAXIP1Q6ZW49 1069 aaPredicted RBP12.03□□□□□ -0.48
FCF1-207ENST00000554973 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
FCF1-207ENST00000554973 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
FCF1-207ENST00000554973 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
FCF1-207ENST00000554973 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
FCF1-207ENST00000554973 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
FCF1-207ENST00000554973 EVX2Q03828 476 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms