RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 BPTFQ12830 3046 aa5.07□□□□□ -1.6
ITGA1-203ENST00000504669 ABCA2Q9BZC7 2435 aa5.06□□□□□ -1.6
ITGA1-203ENST00000504669 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
ITGA1-203ENST00000504669 F8P00451 2351 aa5.03□□□□□ -1.6
ITGA1-203ENST00000504669 HIVEP3Q5T1R4 2406 aa4.99□□□□□ -1.61
ITGA1-203ENST00000504669 FAM208BQ5VWN6 2430 aa4.96□□□□□ -1.61
ITGA1-203ENST00000504669 TTC28Q96AY4 2481 aa4.95□□□□□ -1.62
ITGA1-203ENST00000504669 MYO9AB2RTY4 2548 aa4.95□□□□□ -1.62
ITGA1-203ENST00000504669 PTPN13Q12923 2485 aa4.94□□□□□ -1.62
ITGA1-203ENST00000504669 CCDC168Q8NDH2 2452 aa4.93□□□□□ -1.62
ITGA1-203ENST00000504669 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
ITGA1-203ENST00000504669 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
ITGA1-203ENST00000504669 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
ITGA1-203ENST00000504669 NCOR2Q9Y618 2525 aa4.82□□□□□ -1.64
ITGA1-203ENST00000504669 PKD1L2Q7Z442 2459 aa4.79□□□□□ -1.64
ITGA1-203ENST00000504669 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
ITGA1-203ENST00000504669 MUC6Q6W4X9 2439 aa4.78□□□□□ -1.64
ITGA1-203ENST00000504669 RIF1Q5UIP0 2472 aaKnown RBP4.78□□□□□ -1.64
ITGA1-203ENST00000504669 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
ITGA1-203ENST00000504669 DMBT1Q9UGM3 2413 aaPredicted RBP4.77□□□□□ -1.65
ITGA1-203ENST00000504669 NAV2Q8IVL1 2488 aa4.76□□□□□ -1.65
ITGA1-203ENST00000504669 LRRK2Q5S007 2527 aa4.72□□□□□ -1.65
ITGA1-203ENST00000504669 ZFHX2Q9C0A1 2572 aaPredicted RBP4.71□□□□□ -1.66
ITGA1-203ENST00000504669 ACANP16112 2415 aa4.7□□□□□ -1.66
ITGA1-203ENST00000504669 TLN1Q9Y490 2541 aaKnown RBP4.67□□□□□ -1.66
ITGA1-203ENST00000504669 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
ITGA1-203ENST00000504669 SPTBN4Q9H254 2564 aa4.65□□□□□ -1.66
ITGA1-203ENST00000504669 CHD8Q9HCK8 2581 aa4.65□□□□□ -1.66
ITGA1-203ENST00000504669 NOTCH2Q04721 2471 aa4.64□□□□□ -1.67
ITGA1-203ENST00000504669 TLN2Q9Y4G6 2542 aa4.64□□□□□ -1.67
ITGA1-203ENST00000504669 ANKRD17O75179 2603 aaKnown RBP4.64□□□□□ -1.67
ITGA1-203ENST00000504669 CACNA1AO00555 2505 aa4.63□□□□□ -1.67
ITGA1-203ENST00000504669 IGF2RP11717 2491 aa4.63□□□□□ -1.67
ITGA1-203ENST00000504669 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
ITGA1-203ENST00000504669 PIEZO2Q9H5I5 2752 aa4.58□□□□□ -1.68
ITGA1-203ENST00000504669 PIEZO1Q92508 2521 aa4.55□□□□□ -1.68
ITGA1-203ENST00000504669 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
ITGA1-203ENST00000504669 SRCAPQ6ZRS2 3230 aa4.53□□□□□ -1.68
ITGA1-203ENST00000504669 ACACBO00763 2458 aa4.53□□□□□ -1.68
ITGA1-203ENST00000504669 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
ITGA1-203ENST00000504669 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
ITGA1-203ENST00000504669 USP9XQ93008 2570 aaPredicted RBP4.51□□□□□ -1.69
ITGA1-203ENST00000504669 CENPEQ02224 2701 aa4.51□□□□□ -1.69
ITGA1-203ENST00000504669 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
ITGA1-203ENST00000504669 COL6A5A8TX70 2615 aa4.49□□□□□ -1.69
ITGA1-203ENST00000504669 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
ITGA1-203ENST00000504669 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
ITGA1-203ENST00000504669 PRRC2CQ9Y520 2896 aaKnown RBP4.46□□□□□ -1.7
ITGA1-203ENST00000504669 MTORP42345 2549 aa4.45□□□□□ -1.7
ITGA1-203ENST00000504669 ABCA12Q86UK0 2595 aa4.44□□□□□ -1.7
ITGA1-203ENST00000504669 KMT2BQ9UMN6 2715 aaPredicted RBP4.43□□□□□ -1.7
ITGA1-203ENST00000504669 MYO18BQ8IUG5 2567 aa4.42□□□□□ -1.7
ITGA1-203ENST00000504669 JMJD1CQ15652 2540 aa4.41□□□□□ -1.7
ITGA1-203ENST00000504669 EPG5Q9HCE0 2579 aa4.35□□□□□ -1.71
ITGA1-203ENST00000504669 MGAM2Q2M2H8 2515 aa4.34□□□□□ -1.72
ITGA1-203ENST00000504669 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
ITGA1-203ENST00000504669 POLQO75417 2590 aa4.28□□□□□ -1.72
ITGA1-203ENST00000504669 ZFYVE26Q68DK2 2539 aa4.23□□□□□ -1.73
ITGA1-203ENST00000504669 FASNP49327 2511 aaKnown RBP4.23□□□□□ -1.73
ITGA1-203ENST00000504669 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
ITGA1-203ENST00000504669 A0A0C4DFX4 3053 aa4.22□□□□□ -1.73
ITGA1-203ENST00000504669 SETD2Q9BYW2 2564 aaPredicted RBP4.17□□□□□ -1.74
ITGA1-203ENST00000504669 NBEAL1Q6ZS30 2694 aa4.14□□□□□ -1.75
ITGA1-203ENST00000504669 LORP23490 312 aaPredicted RBP4.14□□□□□ -1.75
ITGA1-203ENST00000504669 BAHCC1Q9P281 2608 aa4.12□□□□□ -1.75
ITGA1-203ENST00000504669 CHD6Q8TD26 2715 aa4.11□□□□□ -1.75
ITGA1-203ENST00000504669 TGP01266 2768 aa4.1□□□□□ -1.75
ITGA1-203ENST00000504669 UNC79Q9P2D8 2635 aa4.09□□□□□ -1.75
ITGA1-203ENST00000504669 MGAQ8IWI9 3026 aa4.08□□□□□ -1.76
ITGA1-203ENST00000504669 UBR5O95071 2799 aaPredicted RBP4.08□□□□□ -1.76
ITGA1-203ENST00000504669 USP9YO00507 2555 aaPredicted RBP4.07□□□□□ -1.76
ITGA1-203ENST00000504669 GCN1Q92616 2671 aaKnown RBP4.05□□□□□ -1.76
ITGA1-203ENST00000504669 CENPFP49454 3210 aa4.04□□□□□ -1.76
ITGA1-203ENST00000504669 CEP295Q9C0D2 2601 aa4.04□□□□□ -1.76
ITGA1-203ENST00000504669 UTRNP46939 3433 aa4.03□□□□□ -1.76
ITGA1-203ENST00000504669 ITPR1Q14643 2758 aa4.02□□□□□ -1.77
ITGA1-203ENST00000504669 APCP25054 2843 aa4.01□□□□□ -1.77
ITGA1-203ENST00000504669 STAB1Q9NY15 2570 aa4□□□□□ -1.77
ITGA1-203ENST00000504669 ZZEF1O43149 2961 aa3.99□□□□□ -1.77
ITGA1-203ENST00000504669 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
ITGA1-203ENST00000504669 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
ITGA1-203ENST00000504669 HECTD1Q9ULT8 2610 aa3.97□□□□□ -1.77
ITGA1-203ENST00000504669 CFAP46Q8IYW2 2715 aa3.97□□□□□ -1.77
ITGA1-203ENST00000504669 NBEAL2Q6ZNJ1 2754 aa3.96□□□□□ -1.78
ITGA1-203ENST00000504669 BDP1A6H8Y1 2624 aa3.93□□□□□ -1.78
ITGA1-203ENST00000504669 MAP1AP78559 2803 aaPredicted RBP3.93□□□□□ -1.78
ITGA1-203ENST00000504669 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
ITGA1-203ENST00000504669 REV3LO60673 3130 aa3.92□□□□□ -1.78
ITGA1-203ENST00000504669 UNC80Q8N2C7 3258 aa3.92□□□□□ -1.78
ITGA1-203ENST00000504669 DNAH12Q6ZR08 3092 aa3.92□□□□□ -1.78
ITGA1-203ENST00000504669 FLNAP21333 2647 aaKnown RBP3.92□□□□□ -1.78
ITGA1-203ENST00000504669 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
ITGA1-203ENST00000504669 CFAP54Q96N23 3096 aa3.91□□□□□ -1.78
ITGA1-203ENST00000504669 C5orf42Q9H799 3197 aa3.9□□□□□ -1.79
ITGA1-203ENST00000504669 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
ITGA1-203ENST00000504669 ANKRD11Q6UB99 2663 aaPredicted RBP3.89□□□□□ -1.79
ITGA1-203ENST00000504669 RANBP2P49792 3224 aaKnown RBP3.88□□□□□ -1.79
ITGA1-203ENST00000504669 EP400Q96L91 3159 aa3.87□□□□□ -1.79
ITGA1-203ENST00000504669 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
ITGA1-203ENST00000504669 WDFY4Q6ZS81 3184 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms