RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 DEFB109BQ30KR1 87 aa2.24□□□□□ -2.05
CCDC66-222ENST00000494672 LYNX1P0DP58 116 aa2.23□□□□□ -2.05
CCDC66-222ENST00000494672 DEFB110Q30KQ9 67 aa2.23□□□□□ -2.05
CCDC66-222ENST00000494672 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
CCDC66-222ENST00000494672 ZDBF2Q9HCK1 2354 aa2.23□□□□□ -2.05
CCDC66-222ENST00000494672 FBN1P35555 2871 aaKnown RBP2.23□□□□□ -2.05
CCDC66-222ENST00000494672 CHD8Q9HCK8 2581 aa2.22□□□□□ -2.05
CCDC66-222ENST00000494672 TPRP12270 2363 aaKnown RBP2.22□□□□□ -2.05
CCDC66-222ENST00000494672 ZNF462Q96JM2 2506 aa2.22□□□□□ -2.05
CCDC66-222ENST00000494672 UNC80Q8N2C7 3258 aa2.22□□□□□ -2.05
CCDC66-222ENST00000494672 IGF2RP11717 2491 aa2.22□□□□□ -2.05
CCDC66-222ENST00000494672 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
CCDC66-222ENST00000494672 GOLGB1Q14789 3259 aaKnown RBP2.21□□□□□ -2.06
CCDC66-222ENST00000494672 H3BUA1 57 aa2.21□□□□□ -2.06
CCDC66-222ENST00000494672 LELP1Q5T871 98 aa2.21□□□□□ -2.06
CCDC66-222ENST00000494672 VCANP13611 3396 aa2.2□□□□□ -2.06
CCDC66-222ENST00000494672 SPRR1AP35321 89 aa2.19□□□□□ -2.06
CCDC66-222ENST00000494672 DEFB1P60022 68 aa2.19□□□□□ -2.06
CCDC66-222ENST00000494672 UNQ6190/PRO20217Q6UXQ8 127 aa2.19□□□□□ -2.06
CCDC66-222ENST00000494672 SPTBN5Q9NRC6 3674 aaKnown RBP2.19□□□□□ -2.06
CCDC66-222ENST00000494672 SETXQ7Z333 2677 aaKnown RBP2.18□□□□□ -2.06
CCDC66-222ENST00000494672 RHPN1-AS1Q9BWJ2 59 aa2.18□□□□□ -2.06
CCDC66-222ENST00000494672 SPTBN1Q01082 2364 aaKnown RBP2.18□□□□□ -2.06
CCDC66-222ENST00000494672 TRANK1O15050 2925 aa2.18□□□□□ -2.06
CCDC66-222ENST00000494672 K7EIL1 84 aa2.17□□□□□ -2.06
CCDC66-222ENST00000494672 PRLHP81277 87 aa2.17□□□□□ -2.06
CCDC66-222ENST00000494672 WNK1Q9H4A3 2382 aa2.16□□□□□ -2.06
CCDC66-222ENST00000494672 PCNX1Q96RV3 2341 aa2.16□□□□□ -2.06
CCDC66-222ENST00000494672 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
CCDC66-222ENST00000494672 DEFB108BQ8NET1 73 aa2.16□□□□□ -2.06
CCDC66-222ENST00000494672 EYSQ5T1H1 3165 aa2.15□□□□□ -2.06
CCDC66-222ENST00000494672 MAST4O15021 2626 aa2.15□□□□□ -2.06
CCDC66-222ENST00000494672 PIEZO1Q92508 2521 aa2.15□□□□□ -2.07
CCDC66-222ENST00000494672 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CCDC66-222ENST00000494672 PTPRZ1P23471 2315 aaPredicted RBP2.15□□□□□ -2.07
CCDC66-222ENST00000494672 SPRR1BP22528 89 aa2.14□□□□□ -2.07
CCDC66-222ENST00000494672 KRTAP13-2Q52LG2 175 aa2.14□□□□□ -2.07
CCDC66-222ENST00000494672 MUC3AQ02505 3323 aa2.14□□□□□ -2.07
CCDC66-222ENST00000494672 LAMA2P24043 3122 aaKnown RBP2.13□□□□□ -2.07
CCDC66-222ENST00000494672 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
CCDC66-222ENST00000494672 MKI67P46013 3256 aaKnown RBP2.13□□□□□ -2.07
CCDC66-222ENST00000494672 HTN1P15515 57 aa2.12□□□□□ -2.07
CCDC66-222ENST00000494672 FAM208BQ5VWN6 2430 aa2.12□□□□□ -2.07
CCDC66-222ENST00000494672 PKDREJQ9NTG1 2253 aa2.12□□□□□ -2.07
CCDC66-222ENST00000494672 USP9XQ93008 2570 aaPredicted RBP2.11□□□□□ -2.07
CCDC66-222ENST00000494672 SPINK1P00995 79 aa2.11□□□□□ -2.07
CCDC66-222ENST00000494672 DEFB119Q8N690 84 aa2.11□□□□□ -2.07
CCDC66-222ENST00000494672 APLNQ9ULZ1 77 aa2.11□□□□□ -2.07
CCDC66-222ENST00000494672 AKAP6Q13023 2319 aa2.11□□□□□ -2.07
CCDC66-222ENST00000494672 NAV2Q8IVL1 2488 aa2.1□□□□□ -2.07
CCDC66-222ENST00000494672 H3BUX3 64 aa2.1□□□□□ -2.07
CCDC66-222ENST00000494672 CFAP47Q6ZTR5 3102 aa2.09□□□□□ -2.07
CCDC66-222ENST00000494672 FASNP49327 2511 aaKnown RBP2.09□□□□□ -2.07
CCDC66-222ENST00000494672 KRTAP13-1Q8IUC0 172 aa2.09□□□□□ -2.07
CCDC66-222ENST00000494672 S4R3F8 94 aa2.09□□□□□ -2.07
CCDC66-222ENST00000494672 RANBP2P49792 3224 aaKnown RBP2.08□□□□□ -2.08
CCDC66-222ENST00000494672 TEP1Q99973 2627 aaKnown RBP2.08□□□□□ -2.08
CCDC66-222ENST00000494672 ACACAQ13085 2346 aa2.08□□□□□ -2.08
CCDC66-222ENST00000494672 BRCA2P51587 3418 aa2.08□□□□□ -2.08
CCDC66-222ENST00000494672 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
CCDC66-222ENST00000494672 BDP1A6H8Y1 2624 aa2.07□□□□□ -2.08
CCDC66-222ENST00000494672 CD52P31358 61 aa2.07□□□□□ -2.08
CCDC66-222ENST00000494672 PIEZO2Q9H5I5 2752 aa2.07□□□□□ -2.08
CCDC66-222ENST00000494672 CHD6Q8TD26 2715 aa2.06□□□□□ -2.08
CCDC66-222ENST00000494672 FLNBO75369 2602 aaKnown RBP2.06□□□□□ -2.08
CCDC66-222ENST00000494672 MUC6Q6W4X9 2439 aa2.06□□□□□ -2.08
CCDC66-222ENST00000494672 USP24Q9UPU5 2620 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 SPTA1P02549 2419 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 DOPEY1Q5JWR5 2465 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 NOP10Q9NPE3 64 aaKnown RBP2.05□□□□□ -2.08
CCDC66-222ENST00000494672 PRO0255Q9UI72 69 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 FBN3Q75N90 2809 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 ROS1P08922 2347 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 CSPG4Q6UVK1 2322 aa2.05□□□□□ -2.08
CCDC66-222ENST00000494672 ANKRD11Q6UB99 2663 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-222ENST00000494672 RP1L1Q8IWN7 2480 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-222ENST00000494672 Q9Y3F1 56 aa2.04□□□□□ -2.08
CCDC66-222ENST00000494672 EPG5Q9HCE0 2579 aa2.03□□□□□ -2.08
CCDC66-222ENST00000494672 Q5VSD8 79 aa2.02□□□□□ -2.09
CCDC66-222ENST00000494672 PTPN13Q12923 2485 aa2.02□□□□□ -2.09
CCDC66-222ENST00000494672 JMJD1CQ15652 2540 aa2.01□□□□□ -2.09
CCDC66-222ENST00000494672 SPTBN2O15020 2390 aa2.01□□□□□ -2.09
CCDC66-222ENST00000494672 DEFB136Q30KP8 78 aa2□□□□□ -2.09
CCDC66-222ENST00000494672 C5orf42Q9H799 3197 aa2□□□□□ -2.09
CCDC66-222ENST00000494672 TTC28Q96AY4 2481 aa2□□□□□ -2.09
CCDC66-222ENST00000494672 MGAQ8IWI9 3026 aa2□□□□□ -2.09
CCDC66-222ENST00000494672 GCN1Q92616 2671 aaKnown RBP2□□□□□ -2.09
CCDC66-222ENST00000494672 ZNF292O60281 2723 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 CENPFP49454 3210 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 MYO18BQ8IUG5 2567 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 DNAH12Q6ZR08 3092 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 A0A0D9SG42 100 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 USP34Q70CQ2 3546 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 ABCA2Q9BZC7 2435 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 CFAP54Q96N23 3096 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 SPTBN4Q9H254 2564 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 DCHS1Q96JQ0 3298 aa1.99□□□□□ -2.09
CCDC66-222ENST00000494672 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
CCDC66-222ENST00000494672 KRTAP21-3Q3LHN1 58 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms