RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 MADDQ8WXG6 1647 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 DNAH11Q96DT5 4516 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 LINC01549A6NIU2 74 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 CRIP1P50238 77 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 LINC00158P58513 81 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 S100ZQ8WXG8 99 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 UBL5Q9BZL1 73 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 DNAH5Q8TE73 4624 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 BOD1L1Q8NFC6 3051 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 ADAMTS12P58397 1594 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 CDC42BPGQ6DT37 1551 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 CDH23Q9H251 3354 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 RICTORQ6R327 1708 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 TIAM2Q8IVF5 1701 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 SMG1Q96Q15 3661 aaKnown RBP0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 SPENQ96T58 3664 aaKnown RBP0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 ZZEF1O43149 2961 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 LMTK2Q8IWU2 1503 aa0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 ZC3H13Q5T200 1668 aaKnown RBP0.18□□□□□ -2.38
TRAJ3-201ENST00000390534 HSPG2P98160 4391 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 ABCA2Q9BZC7 2435 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 EP400Q96L91 3159 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 VPS13CQ709C8 3753 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 PDZD2O15018 2839 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 DEFB131BA0A096LNP1 70 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 ETDCA0A1B0GVM5 59 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 LOC730098B7Z3J9 87 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 LOC400499M0QZD8 3231 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 TRANK1O15050 2925 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 NWD1Q149M9 1564 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 KRTAP21-1Q3LI58 79 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 KCNQ1DNQ9H478 68 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 ANK3Q12955 4377 aaKnown RBP0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 WDFY4Q6ZS81 3184 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 MGAQ8IWI9 3026 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 PREX1Q8TCU6 1659 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 WNK1Q9H4A3 2382 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 LRP2P98164 4655 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
TRAJ3-201ENST00000390534 PTPN13Q12923 2485 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 ABCA9Q8IUA7 1624 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 VPS13AQ96RL7 3174 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 CMYA5Q8N3K9 4069 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 SETXQ7Z333 2677 aaKnown RBP0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 TENM3Q9P273 2699 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 CUBNO60494 3623 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 APOBP04114 4563 aaKnown RBP0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 DNAH2Q9P225 4427 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 TRRAPQ9Y4A5 3859 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 DMXL1Q9Y485 3027 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 H0YAA0 97 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 MRPL33O75394 65 aaKnown RBP0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 SFTA3P0C7M3 94 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 KRTAP5-10Q6L8G5 202 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 PLCH1Q4KWH8 1693 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 CFAP43Q8NDM7 1665 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 EFCAB5A4FU69 1503 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 ALMS1Q8TCU4 4167 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 DNAH10Q8IVF4 4471 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 RALGAPBQ86X10 1494 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 ITSN1Q15811 1721 aa0.16□□□□□ -2.38
TRAJ3-201ENST00000390534 DNAH8Q96JB1 4490 aa0.15□□□□□ -2.38
TRAJ3-201ENST00000390534 DYNC2H1Q8NCM8 4307 aaKnown RBP0.15□□□□□ -2.38
TRAJ3-201ENST00000390534 TNRC6CQ9HCJ0 1690 aaKnown RBP0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 HFM1A2PYH4 1435 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 FRYQ5TBA9 3013 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 WDR87Q6ZQQ6 2873 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 ERICH3Q5RHP9 1530 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 DNAH1Q9P2D7 4330 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 PRM1P04553 51 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 AKAP9Q99996 3911 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 TRIOO75962 3097 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 NESP48681 1621 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 MROH1Q8NDA8 1641 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 FREM2Q5SZK8 3169 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 C5orf42Q9H799 3197 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 DNAH17Q9UFH2 4485 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 KMT2AQ03164 3969 aa0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 DMBT1Q9UGM3 2413 aaPredicted RBP0.15□□□□□ -2.39
TRAJ3-201ENST00000390534 WIZO95785 1651 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 DCHS2Q6V1P9 2916 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 LPAP08519 4548 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 KMT2DO14686 5537 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 VPS13DQ5THJ4 4388 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 APC2O95996 2303 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 EP300Q09472 2414 aaPredicted RBP0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 HIVEP3Q5T1R4 2406 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 TNXBP22105 4242 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 CHD7Q9P2D1 2997 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 LAMA1P25391 3075 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 DNAH12Q6ZR08 3092 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 CFAP54Q96N23 3096 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 COL12A1Q99715 3063 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms