RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Gm21913J3KML9 361 aa12.27□□□□□ -0.44
Upf1-202ENSMUST00000215817 Gm21776J3QPJ5 361 aa12.27□□□□□ -0.44
Upf1-202ENSMUST00000215817 Lmo4P61969 165 aa12.27□□□□□ -0.44
Upf1-202ENSMUST00000215817 Leprotl1Q9CQ74 131 aa12.27□□□□□ -0.44
Upf1-202ENSMUST00000215817 Olfr218E9PWV2 313 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Defa2P28309 93 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Loxl2P58022 776 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Trav6d-5A0A075B6B9 112 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Pth2Q91W27 100 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Rab37Q9JKM7 223 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm16442D3YZG3 307 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Wfdc9Q3UW41 83 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 Wdfy4E9Q2M9 3149 aa12.27□□□□□ -0.45
Upf1-202ENSMUST00000215817 TymsP07607 307 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Isg15Q64339 161 aaKnown RBP12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Olfr484Q8VFD3 321 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Rnf126Q91YL2 313 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Usp24B1AY13 2617 aaKnown RBP12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Frem2Q6NVD0 3160 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Trav6-4A0A075B6B4 115 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Snrpd3P62320 126 aaKnown RBP12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 BlcapP62951 87 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 3110018I06RikQ9CXS0 120 aa12.26□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm10020E9QAZ2 204 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 P04940 107 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 P04941 107 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Snx22Q8C084 192 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Rpl15Q9CZM2 204 aaKnown RBP12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Kiaa1549Q68FD9 1940 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Tmem100Q9CQG9 134 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm20458E9PXJ7 78 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Fam24aQ8CF27 98 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Olfr223Q8VF69 319 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Esp24A8R0V6 68 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Smlr1J3QMJ4 66 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Ube2cQ9D1C1 179 aa12.25□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm6871L7N248 545 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 LfngO09010 378 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Defa1P11477 93 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Ssbp1Q9CYR0 152 aaKnown RBP12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm20773A0A0A6YXW2 232 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm20807A0A0A6YXX7 232 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm13030A2APQ6 143 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm20873J3QMQ9 232 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm20795J3QP49 232 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm21440Q3TTD8 232 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 E130116L18RikQ8BMV6 101 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Bles03Q8VD62 251 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 VcanQ62059 3357 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Sap30O88574 220 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 EtdQ80SW5 59 aa12.24□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm5157A0A087WRH8 301 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Trbv1A0A0B4J1G7 116 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Trdv2-1A0A0G2JGB9 116 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Trdv2-2Q5R1A4 116 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Vdac2Q60930 295 aaKnown RBP12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Wdr83osQ6ZWX0 106 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Vmn1r1E9PVR6 306 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Bsph1Q3UW26 133 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Slamf7Q8BHK6 333 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Muc15Q8C6Z1 331 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Klk4Q9Z0M1 255 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 P01630 113 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 P01812 117 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 S100a4P07091 101 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Trav15-1-dv6-1Q5R1D2 117 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm9961Q8BNV2 113 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Tmem129Q8K304 362 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Chac2Q9CQG1 178 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Josd1Q9DBJ6 202 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 PdfS4R2K0 231 aa12.23□□□□□ -0.45
Upf1-202ENSMUST00000215817 Cks1bP61025 79 aa12.22□□□□□ -0.45
Upf1-202ENSMUST00000215817 Cphx2Q8BX39 182 aa12.22□□□□□ -0.45
Upf1-202ENSMUST00000215817 Olfr1441Q8VFV3 318 aa12.22□□□□□ -0.45
Upf1-202ENSMUST00000215817 Pef1Q8BFY6 275 aa12.22□□□□□ -0.45
Upf1-202ENSMUST00000215817 Defa23Q5G866 93 aa12.22□□□□□ -0.45
Upf1-202ENSMUST00000215817 Fam216bQ8CC14 138 aa12.22□□□□□ -0.45
Upf1-202ENSMUST00000215817 NrepQ07475 68 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Ifi27Q8C6G0 260 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Nit2Q9JHW2 276 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 PerpQ9JK95 193 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gdf15Q9Z0J7 303 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Znf575Q3TXZ1 239 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Fam19a2Q7TPG7 131 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Vmn1r54Q9EPB8 315 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 ApomQ9Z1R3 190 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Igkv14-130A0A0G2JF45 117 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Gm2564F6Z9S8 108 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Ccl19O70460 108 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Ang4Q3TMQ6 144 aa12.21□□□□□ -0.45
Upf1-202ENSMUST00000215817 Iglc2P01844 104 aa12.21□□□□□ -0.46
Upf1-202ENSMUST00000215817 Tcl1b2P56841 117 aa12.21□□□□□ -0.46
Upf1-202ENSMUST00000215817 Foxi3E0CZH3 425 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 P01790 122 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Duxbl2Q7TNE6 350 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Olfr211Q8VGH2 309 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Slc25a39Q9D8K8 359 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Slamf6Q9ET39 351 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Plscr4P58196 326 aa12.2□□□□□ -0.46
Upf1-202ENSMUST00000215817 Rnase9P60154 184 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms