RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Igkv4-78A0A0A6YYE5 119 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Trbv1A0A0B4J1G7 116 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Mgst3Q9CPU4 153 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Trav7n-4A0A075B620 113 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Iglc3P01845 104 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Olfr433Q7TRV9 314 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Eml6Q5SQM0 1958 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Ighv3-4A0A0A6YXF1 117 aa13.81□□□□□ -0.2
Col27a1-201ENSMUST00000036300 P01680 129 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 ApohQ01339 345 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Crlf1Q9JM58 425 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Hils1Q9QYL0 170 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Prrc2aQ7TSC1 2158 aaKnown RBP13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Gm37388A0A0A6YY46 143 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 1500009C09RikD3YYW9 81 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 MyofQ69ZN7 2048 aaKnown RBP13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Myod1P10085 318 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Gm5105Q8C6Y9 112 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Gm26938S4R185 226 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Ighv1-80A0A075B5Y3 117 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Ankrd39Q9D2X0 183 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Znf319Q9ERR8 581 aa13.8□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Tomm40Q9QYA2 361 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Ltbp4Q8K4G1 1666 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Trbv3A0A0A6YYE2 117 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Pfn2Q9JJV2 140 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Wdr86D3Z757 380 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 AtraidQ6PGD0 223 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 CompQ9R0G6 755 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Tcrg-C1A0A075B5Z0 172 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Foxf2O54743 446 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Fbln7Q501P1 440 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Dmrt3Q80WT2 476 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Dnase2P56542 353 aa13.79□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Zmat4Q8BZ94 229 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Igkv8-16A0A0G2JDG9 121 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Gm20219A0A1B0GRQ3 87 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Eid2bE9Q2Y0 151 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Trav7d-3Q5R1I1 112 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Cox6a1P43024 111 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Rnf183Q8QZS5 190 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Eml5Q8BQM8 1977 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Ear14F6YUX7 155 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Gm4894Q8CA09 118 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Parm1Q923D3 296 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 8030423J24RikQ9CX45 142 aa13.78□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Igkv9-124A0A0G2JDR3 117 aa13.77□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Igkv4-58A0A0G2JGI6 119 aa13.77□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Gm20458E9PXJ7 78 aa13.77□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Sod1P08228 154 aaKnown RBP13.77□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Trav3-3Q5R1C3 114 aa13.77□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Nlrc5C3VPR6 1915 aa13.77□□□□□ -0.2
Col27a1-201ENSMUST00000036300 Trdv1A0A075B657 112 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Trav6d-3A0A075B6B3 112 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Trav6-3Q5R1E6 112 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Edn3P48299 214 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Ighv1-62-3P01754 117 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Plac1Q9JI83 173 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Fer1l4A3KGK3 1992 aa13.77□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Ighv8-4A0A0A6YW26 117 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Svs5P30933 122 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Tmem171Q4KL18 322 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 LgalslbQ7TPX9 165 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Trav4-4-dv10A0A075B651 110 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Trav6d-5A0A075B6B9 112 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Gm10447Q3UQ92 135 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Igkv4-80A0A075B5L7 116 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Znf740Q6NZQ6 180 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 OstcQ78XF5 149 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Olfr484Q8VFD3 321 aa13.76□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Eif4ebp2P70445 120 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Olfr745Q7TRL9 328 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Rnf5O35445 180 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Ighv5-12-4A0A0A6YWG4 117 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 PolP10400 120 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Cela2aP05208 271 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Q8VE95 218 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Timm10bQ9WV96 100 aa13.75□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Zfp648D3Z0W3 525 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Zc2hc1bQ9D534 172 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Jmjd1cQ69ZK6 2350 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 AcanQ61282 2132 aaKnown RBP13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Smim10l1A0A087WNQ7 89 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Igkv20-101-2A0A0G2JDU3 113 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Gm20481G3UXK4 153 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 AgrnA2ASQ1 1950 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Tmem256Q5F285 113 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 2210407C18RikQ6YI28 220 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Itgb4A2A863 1818 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Lcn2P11672 200 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Mrps21P58059 87 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Trdv4Q5R1A3 115 aa13.74□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Trav3n-3A0A0G2JEM0 114 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 A0A1Y7VLU2 103 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 1700084M14RikB1AT01 78 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Olfr1373Q7TQT6 311 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Tmem141A2AJB2 108 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Sec11aQ9R0P6 179 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Rpl32-psP17932 135 aa13.73□□□□□ -0.21
Col27a1-201ENSMUST00000036300 Timp3P39876 211 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms