RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 C4AP0C0L4 1744 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 C4BP0C0L5 1744 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 ACANP16112 2415 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 GYPAP02724 150 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 DEFB112Q30KQ8 113 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 HEPN1Q6WQI6 88 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 CHD8Q9HCK8 2581 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 WNK1Q9H4A3 2382 aa-0.49□□□□□ -2.49
LINC00648-201ENST00000553747 RGPD4Q7Z3J3 1758 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 MYH4Q9Y623 1939 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 DNAJC13O75165 2243 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 PCNX1Q96RV3 2341 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 HMGN2P05204 90 aaKnown RBP-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 COX7BP24311 80 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 MT4P47944 62 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 COX6B2Q6YFQ2 88 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 WFDC13Q8IUB5 93 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 SNHG12Q9BXW3 62 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 TTC37Q6PGP7 1564 aa-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.5□□□□□ -2.49
LINC00648-201ENST00000553747 DNAH6Q9C0G6 4158 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 NESP48681 1621 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 KRTAP20-2Q3LI61 65 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 NMSQ5H8A3 153 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 MAP3K4Q9Y6R4 1608 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 USH2AO75445 5202 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 LYSTQ99698 3801 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 NBEAL1Q6ZS30 2694 aa-0.51□□□□□ -2.49
LINC00648-201ENST00000553747 RGPD3A6NKT7 1758 aaPredicted RBP-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 CCNB3Q8WWL7 1395 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 A0A1B0GUT8 65 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 SMIM11AP58511 58 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 PKIAP61925 76 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 RPL38P63173 70 aaKnown RBP-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 KIAA1109Q2LD37 5005 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 UBR4Q5T4S7 5183 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 AKAP13Q12802 2813 aa-0.52□□□□□ -2.49
LINC00648-201ENST00000553747 RYR1P21817 5038 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 NWD1Q149M9 1564 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 NBPF19A0A087WUL8 3843 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 NEXMIFQ5QGS0 1516 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 TRANK1O15050 2925 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 PEA15Q15121 130 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 PLGLAQ15195 96 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 C20orf78Q9BR46 151 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 HTTP42858 3142 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 LTN1O94822 1766 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 USP32Q8NFA0 1604 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 PLXNC1O60486 1568 aa-0.53□□□□□ -2.49
LINC00648-201ENST00000553747 HYDINQ4G0P3 5121 aa-0.53□□□□□ -2.5
LINC00648-201ENST00000553747 MAGI3Q5TCQ9 1506 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 UBR3Q6ZT12 1888 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 STARD9Q9P2P6 4700 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 KRTAP19-8Q3LI54 63 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 KIF14Q15058 1648 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 AKAP9Q99996 3911 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 STAB2Q8WWQ8 2551 aa-0.54□□□□□ -2.5
LINC00648-201ENST00000553747 SONP18583 2426 aaKnown RBP-0.55□□□□□ -2.5
LINC00648-201ENST00000553747 TGP01266 2768 aa-0.55□□□□□ -2.5
LINC00648-201ENST00000553747 IQCF6A8MYZ5 107 aa-0.56□□□□□ -2.5
LINC00648-201ENST00000553747 H0YGG7 62 aa-0.56□□□□□ -2.5
LINC00648-201ENST00000553747 PPLO60437 1756 aa-0.56□□□□□ -2.5
LINC00648-201ENST00000553747 VPS13BQ7Z7G8 4022 aa-0.56□□□□□ -2.5
LINC00648-201ENST00000553747 LAMA2P24043 3122 aaKnown RBP-0.56□□□□□ -2.5
LINC00648-201ENST00000553747 CNOT1A5YKK6 2376 aaKnown RBP-0.57□□□□□ -2.5
LINC00648-201ENST00000553747 DOT1LQ8TEK3 1739 aa-0.57□□□□□ -2.5
LINC00648-201ENST00000553747 CYB5AP00167 134 aa-0.57□□□□□ -2.5
LINC00648-201ENST00000553747 GAFA1Q96PS6 74 aa-0.57□□□□□ -2.5
LINC00648-201ENST00000553747 WIZO95785 1651 aa-0.57□□□□□ -2.5
LINC00648-201ENST00000553747 ZNF831Q5JPB2 1677 aa-0.58□□□□□ -2.5
LINC00648-201ENST00000553747 USP9XQ93008 2570 aaPredicted RBP-0.58□□□□□ -2.5
LINC00648-201ENST00000553747 PKHD1L1Q86WI1 4243 aa-0.58□□□□□ -2.5
LINC00648-201ENST00000553747 PLIN4Q96Q06 1357 aa-0.58□□□□□ -2.5
LINC00648-201ENST00000553747 URB2Q14146 1524 aaKnown RBP-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 TNRC18O15417 2968 aaPredicted RBP-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 CCDC88BA6NC98 1476 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 MYMXA0A1B0GTQ4 84 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 NDUFA3O95167 84 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 CUBNO60494 3623 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 DIP2BQ9P265 1576 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 DNAH9Q9NYC9 4486 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 DNAH3Q8TD57 4116 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 SPTBN4Q9H254 2564 aa-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 DSPP15924 2871 aaKnown RBP-0.59□□□□□ -2.5
LINC00648-201ENST00000553747 ITPR3Q14573 2671 aa-0.6□□□□□ -2.5
LINC00648-201ENST00000553747 PIK3C2BO00750 1634 aa-0.6□□□□□ -2.5
LINC00648-201ENST00000553747 DEPDC5O75140 1603 aa-0.6□□□□□ -2.5
LINC00648-201ENST00000553747 K7EP34 96 aa-0.6□□□□□ -2.51
LINC00648-201ENST00000553747 PYY3Q5JQD4 70 aa-0.6□□□□□ -2.51
LINC00648-201ENST00000553747 RABAC1Q9UI14 185 aa-0.6□□□□□ -2.51
LINC00648-201ENST00000553747 ANK3Q12955 4377 aaKnown RBP-0.6□□□□□ -2.51
LINC00648-201ENST00000553747 MXRA5Q9NR99 2828 aa-0.6□□□□□ -2.51
LINC00648-201ENST00000553747 EPPK1P58107 5090 aaKnown RBP-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 APOBP04114 4563 aaKnown RBP-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 EPG5Q9HCE0 2579 aa-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 TRAV21A0A0B4J279 112 aa-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 SNRPFP62306 86 aaKnown RBP-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 SPRR2FQ96RM1 72 aa-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 V9GYS6 101 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms