RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ZNF469Q96JG9 3925 aaPredicted RBP0.9□□□□□ -2.27
C11orf88-204ENST00000529661 BDP1A6H8Y1 2624 aa0.89□□□□□ -2.27
C11orf88-204ENST00000529661 TIAM1Q13009 1591 aa0.89□□□□□ -2.27
C11orf88-204ENST00000529661 DIP2AQ14689 1571 aa0.89□□□□□ -2.27
C11orf88-204ENST00000529661 A0A087WWC5 75 aa0.89□□□□□ -2.27
C11orf88-204ENST00000529661 H3BVH4 76 aa0.89□□□□□ -2.27
C11orf88-204ENST00000529661 CEP350Q5VT06 3117 aa0.89□□□□□ -2.27
C11orf88-204ENST00000529661 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
C11orf88-204ENST00000529661 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
C11orf88-204ENST00000529661 SPTBN1Q01082 2364 aaKnown RBP0.88□□□□□ -2.27
C11orf88-204ENST00000529661 CCL22O00626 93 aa0.87□□□□□ -2.27
C11orf88-204ENST00000529661 SPRR1AP35321 89 aa0.87□□□□□ -2.27
C11orf88-204ENST00000529661 HILPDAQ9Y5L2 63 aa0.87□□□□□ -2.27
C11orf88-204ENST00000529661 CHD9Q3L8U1 2897 aa0.87□□□□□ -2.27
C11orf88-204ENST00000529661 PTPN13Q12923 2485 aa0.87□□□□□ -2.27
C11orf88-204ENST00000529661 RALGAPBQ86X10 1494 aa0.86□□□□□ -2.27
C11orf88-204ENST00000529661 RNF17Q9BXT8 1623 aaKnown RBP0.86□□□□□ -2.27
C11orf88-204ENST00000529661 ABCA2Q9BZC7 2435 aa0.86□□□□□ -2.27
C11orf88-204ENST00000529661 ATXN8Q156A1 80 aa0.86□□□□□ -2.27
C11orf88-204ENST00000529661 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
C11orf88-204ENST00000529661 CHD6Q8TD26 2715 aa0.86□□□□□ -2.27
C11orf88-204ENST00000529661 BPTFQ12830 3046 aa0.86□□□□□ -2.27
C11orf88-204ENST00000529661 A0A0C4DFX4 3053 aa0.85□□□□□ -2.27
C11orf88-204ENST00000529661 NDUFA4O00483 81 aa0.85□□□□□ -2.27
C11orf88-204ENST00000529661 FRAS1Q86XX4 4008 aa0.85□□□□□ -2.27
C11orf88-204ENST00000529661 ANKRD11Q6UB99 2663 aaPredicted RBP0.85□□□□□ -2.27
C11orf88-204ENST00000529661 GVINP1Q7Z2Y8 2422 aa0.85□□□□□ -2.27
C11orf88-204ENST00000529661 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
C11orf88-204ENST00000529661 FLNBO75369 2602 aaKnown RBP0.85□□□□□ -2.27
C11orf88-204ENST00000529661 C4AP0C0L4 1744 aa0.84□□□□□ -2.27
C11orf88-204ENST00000529661 C4BP0C0L5 1744 aa0.84□□□□□ -2.27
C11orf88-204ENST00000529661 SPRR1BP22528 89 aa0.84□□□□□ -2.27
C11orf88-204ENST00000529661 COX6B2Q6YFQ2 88 aa0.84□□□□□ -2.27
C11orf88-204ENST00000529661 S100ZQ8WXG8 99 aa0.84□□□□□ -2.27
C11orf88-204ENST00000529661 ABCA6Q8N139 1617 aa0.84□□□□□ -2.28
C11orf88-204ENST00000529661 APCP25054 2843 aa0.84□□□□□ -2.28
C11orf88-204ENST00000529661 NCOR2Q9Y618 2525 aa0.84□□□□□ -2.28
C11orf88-204ENST00000529661 SETD2Q9BYW2 2564 aaPredicted RBP0.84□□□□□ -2.28
C11orf88-204ENST00000529661 PKDREJQ9NTG1 2253 aa0.84□□□□□ -2.28
C11orf88-204ENST00000529661 TPRP12270 2363 aaKnown RBP0.83□□□□□ -2.28
C11orf88-204ENST00000529661 HECTD1Q9ULT8 2610 aa0.83□□□□□ -2.28
C11orf88-204ENST00000529661 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
C11orf88-204ENST00000529661 NAV2Q8IVL1 2488 aa0.82□□□□□ -2.28
C11orf88-204ENST00000529661 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
C11orf88-204ENST00000529661 SPINK6Q6UWN8 80 aa0.82□□□□□ -2.28
C11orf88-204ENST00000529661 GNG13Q9P2W3 67 aa0.82□□□□□ -2.28
C11orf88-204ENST00000529661 THOC2Q8NI27 1593 aaKnown RBP0.82□□□□□ -2.28
C11orf88-204ENST00000529661 VWFP04275 2813 aa0.82□□□□□ -2.28
C11orf88-204ENST00000529661 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 EPG5Q9HCE0 2579 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 TNRC18O15417 2968 aaPredicted RBP0.81□□□□□ -2.28
C11orf88-204ENST00000529661 C3orf79P0CE67 100 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 DEFB105AQ8NG35 78 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 PCNTO95613 3336 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 DOPEY1Q5JWR5 2465 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 PIEZO1Q92508 2521 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 MYO18BQ8IUG5 2567 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 C3P01024 1663 aa0.81□□□□□ -2.28
C11orf88-204ENST00000529661 LY75O60449 1722 aa0.8□□□□□ -2.28
C11orf88-204ENST00000529661 ANKHD1Q8IWZ3 2542 aaKnown RBP0.8□□□□□ -2.28
C11orf88-204ENST00000529661 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
C11orf88-204ENST00000529661 ALS2Q96Q42 1657 aa0.79□□□□□ -2.28
C11orf88-204ENST00000529661 ENHOQ6UWT2 76 aa0.79□□□□□ -2.28
C11orf88-204ENST00000529661 KCNQ1DNQ9H478 68 aa0.79□□□□□ -2.28
C11orf88-204ENST00000529661 AKAP6Q13023 2319 aa0.79□□□□□ -2.28
C11orf88-204ENST00000529661 PREX2Q70Z35 1606 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 TENM3Q9P273 2699 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 NBEAL2Q6ZNJ1 2754 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 PRH1P02810 166 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 CDKN2A-AS1Q9UH64 79 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 APLNQ9ULZ1 77 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 ABCC6O95255 1503 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 SPTBN4Q9H254 2564 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 STAB1Q9NY15 2570 aa0.78□□□□□ -2.28
C11orf88-204ENST00000529661 LRRK2Q5S007 2527 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 SPINK4O60575 86 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 H1FX-AS1Q4G0G2 97 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 UBL5Q9BZL1 73 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 ABCA10Q8WWZ4 1543 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 GLI2P10070 1586 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 NCOR1O75376 2440 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 ANK2Q01484 3957 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 GPR98Q8WXG9 6306 aa0.77□□□□□ -2.29
C11orf88-204ENST00000529661 FASNP49327 2511 aaKnown RBP0.76□□□□□ -2.29
C11orf88-204ENST00000529661 MAST1Q9Y2H9 1570 aa0.76□□□□□ -2.29
C11orf88-204ENST00000529661 DEFB131BA0A096LNP1 70 aa0.76□□□□□ -2.29
C11orf88-204ENST00000529661 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
C11orf88-204ENST00000529661 KALRNO60229 2985 aa0.76□□□□□ -2.29
C11orf88-204ENST00000529661 MRPL33O75394 65 aaKnown RBP0.75□□□□□ -2.29
C11orf88-204ENST00000529661 SFTA3P0C7M3 94 aa0.75□□□□□ -2.29
C11orf88-204ENST00000529661 DEFB114Q30KQ6 69 aa0.75□□□□□ -2.29
C11orf88-204ENST00000529661 SMR3AQ99954 134 aa0.75□□□□□ -2.29
C11orf88-204ENST00000529661 GCN1Q92616 2671 aaKnown RBP0.75□□□□□ -2.29
C11orf88-204ENST00000529661 IGF2RP11717 2491 aa0.75□□□□□ -2.29
C11orf88-204ENST00000529661 DEPDC5O75140 1603 aa0.75□□□□□ -2.29
C11orf88-204ENST00000529661 PLXNC1O60486 1568 aa0.74□□□□□ -2.29
C11orf88-204ENST00000529661 PCLOQ9Y6V0 5065 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms